RNA–Protein interactions for RNA: ENST00000575857.3

SLC12A4-215, Transcript of solute carrier family 12 member 4, humanhuman

TSL 3

Gene SLC12A4, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-215ENST00000575857 SLIT1O75093 1534 aa16.03■□□□□ 0.16
SLC12A4-215ENST00000575857 TMEM131LA2VDJ0 1609 aa16.02■□□□□ 0.16
SLC12A4-215ENST00000575857 ALKQ9UM73 1620 aa16.02■□□□□ 0.16
SLC12A4-215ENST00000575857 TMEM2Q9UHN6 1383 aa16.01■□□□□ 0.15
SLC12A4-215ENST00000575857 TOM1O60784 492 aa16.01■□□□□ 0.15
SLC12A4-215ENST00000575857 MED14O60244 1454 aa16■□□□□ 0.15
SLC12A4-215ENST00000575857 ANKRD30BQ9BXX2 1392 aa16■□□□□ 0.15
SLC12A4-215ENST00000575857 STAG3Q9UJ98 1225 aa15.99■□□□□ 0.15
SLC12A4-215ENST00000575857 MED1Q15648 1581 aaPredicted RBP15.99■□□□□ 0.15
SLC12A4-215ENST00000575857 ZFYVE9O95405 1425 aa15.98■□□□□ 0.15
SLC12A4-215ENST00000575857 LTKP29376 864 aa15.98■□□□□ 0.15
SLC12A4-215ENST00000575857 PCGF6Q9BYE7 350 aa15.97■□□□□ 0.15
SLC12A4-215ENST00000575857 SCAF11Q99590 1463 aaKnown RBP15.97■□□□□ 0.15
SLC12A4-215ENST00000575857 CCDC144AA2RUR9 1427 aa15.96■□□□□ 0.15
SLC12A4-215ENST00000575857 IQGAP1P46940 1657 aa15.95■□□□□ 0.14
SLC12A4-215ENST00000575857 STRCP1A6NGW2 1772 aa15.95■□□□□ 0.14
SLC12A4-215ENST00000575857 LRRC7Q96NW7 1537 aa15.95■□□□□ 0.14
SLC12A4-215ENST00000575857 CHGAP10645 457 aaKnown RBP15.95■□□□□ 0.14
SLC12A4-215ENST00000575857 TXNDC2Q86VQ3 553 aa15.95■□□□□ 0.14
SLC12A4-215ENST00000575857 MYO5BQ9ULV0 1848 aa15.95■□□□□ 0.14
SLC12A4-215ENST00000575857 SPATA31E1Q6ZUB1 1445 aa15.94■□□□□ 0.14
SLC12A4-215ENST00000575857 RIMS2Q9UQ26 1411 aa15.94■□□□□ 0.14
SLC12A4-215ENST00000575857 DHX57Q6P158 1386 aaKnown RBP15.94■□□□□ 0.14
SLC12A4-215ENST00000575857 EID1Q9Y6B2 187 aa15.92■□□□□ 0.14
SLC12A4-215ENST00000575857 KIF1BO60333 1816 aa15.91■□□□□ 0.14
SLC12A4-215ENST00000575857 NEXMIFQ5QGS0 1516 aa15.9■□□□□ 0.14
SLC12A4-215ENST00000575857 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.89■□□□□ 0.13
SLC12A4-215ENST00000575857 PLEKHG1Q9ULL1 1385 aa15.88■□□□□ 0.13
SLC12A4-215ENST00000575857 RPGRIP1LQ68CZ1 1315 aa15.88■□□□□ 0.13
SLC12A4-215ENST00000575857 HDGFP51858 240 aaKnown RBP15.87■□□□□ 0.13
SLC12A4-215ENST00000575857 ZNF326Q5BKZ1 582 aaKnown RBP15.87■□□□□ 0.13
SLC12A4-215ENST00000575857 NUTM2DQ5VT03 806 aaPredicted RBP15.87■□□□□ 0.13
SLC12A4-215ENST00000575857 PHF23Q9BUL5 403 aaPredicted RBP15.87■□□□□ 0.13
SLC12A4-215ENST00000575857 RBM33Q96EV2 1170 aaKnown RBP15.85■□□□□ 0.13
SLC12A4-215ENST00000575857 ADAMTS13Q76LX8 1427 aa15.85■□□□□ 0.13
SLC12A4-215ENST00000575857 PPP1R15AO75807 674 aaPredicted RBP15.84■□□□□ 0.13
SLC12A4-215ENST00000575857 RGL3Q3MIN7 710 aa15.84■□□□□ 0.13
SLC12A4-215ENST00000575857 PPLO60437 1756 aa15.82■□□□□ 0.12
SLC12A4-215ENST00000575857 SETBP1Q9Y6X0 1596 aa15.82■□□□□ 0.12
SLC12A4-215ENST00000575857 NRXN3Q9Y4C0 1643 aa15.82■□□□□ 0.12
SLC12A4-215ENST00000575857 VGFO15240 615 aaPredicted RBP15.81■□□□□ 0.12
SLC12A4-215ENST00000575857 SLC26A8Q96RN1 970 aa15.81■□□□□ 0.12
SLC12A4-215ENST00000575857 IFT172Q9UG01 1749 aa15.81■□□□□ 0.12
SLC12A4-215ENST00000575857 RGS17Q9UGC6 210 aaPredicted RBP15.81■□□□□ 0.12
SLC12A4-215ENST00000575857 ADGRF5Q8IZF2 1346 aa15.8■□□□□ 0.12
SLC12A4-215ENST00000575857 SIN3AQ96ST3 1273 aa15.8■□□□□ 0.12
SLC12A4-215ENST00000575857 TBX22Q9Y458 520 aa15.8■□□□□ 0.12
SLC12A4-215ENST00000575857 TMEM94Q12767 1356 aa15.79■□□□□ 0.12
SLC12A4-215ENST00000575857 MYOM2P54296 1465 aa15.78■□□□□ 0.12
SLC12A4-215ENST00000575857 NRXN1Q9ULB1 1477 aa15.78■□□□□ 0.12
SLC12A4-215ENST00000575857 XIRP1Q702N8 1843 aaKnown RBP15.78■□□□□ 0.12
SLC12A4-215ENST00000575857 DIP2AQ14689 1571 aa15.78■□□□□ 0.12
SLC12A4-215ENST00000575857 PIK3C2GO75747 1445 aa15.77■□□□□ 0.11
SLC12A4-215ENST00000575857 BCANQ96GW7 911 aa15.76■□□□□ 0.11
SLC12A4-215ENST00000575857 PIK3R4Q99570 1358 aa15.75■□□□□ 0.11
SLC12A4-215ENST00000575857 KCNA6P17658 529 aa15.74■□□□□ 0.11
SLC12A4-215ENST00000575857 PROSER2Q86WR7 435 aaPredicted RBP15.74■□□□□ 0.11
SLC12A4-215ENST00000575857 STAC3Q96MF2 364 aa15.74■□□□□ 0.11
SLC12A4-215ENST00000575857 PTPRUQ92729 1446 aa15.74■□□□□ 0.11
SLC12A4-215ENST00000575857 NWD1Q149M9 1564 aa15.74■□□□□ 0.11
SLC12A4-215ENST00000575857 SETD1AO15047 1707 aaKnown RBP15.74■□□□□ 0.11
SLC12A4-215ENST00000575857 METP08581 1390 aa15.74■□□□□ 0.11
SLC12A4-215ENST00000575857 DCAF11Q8TEB1 546 aa15.73■□□□□ 0.11
SLC12A4-215ENST00000575857 FAM135BQ49AJ0 1406 aa15.73■□□□□ 0.11
SLC12A4-215ENST00000575857 NEUROD1Q13562 356 aa15.72■□□□□ 0.11
SLC12A4-215ENST00000575857 CLSPNQ9HAW4 1339 aa15.71■□□□□ 0.11
SLC12A4-215ENST00000575857 L3MBTL2Q969R5 705 aa15.71■□□□□ 0.11
SLC12A4-215ENST00000575857 CHD2O14647 1828 aaKnown RBP15.71■□□□□ 0.1
SLC12A4-215ENST00000575857 ASXL1Q8IXJ9 1541 aa15.7■□□□□ 0.1
SLC12A4-215ENST00000575857 POTEAQ6S8J7 498 aa15.7■□□□□ 0.1
SLC12A4-215ENST00000575857 C14orf93Q9H972 538 aaKnown RBP15.7■□□□□ 0.1
SLC12A4-215ENST00000575857 KDM2AQ9Y2K7 1162 aa15.69■□□□□ 0.1
SLC12A4-215ENST00000575857 NKTRP30414 1462 aaKnown RBP15.69■□□□□ 0.1
SLC12A4-215ENST00000575857 PRAG1Q86YV5 1406 aa15.68■□□□□ 0.1
SLC12A4-215ENST00000575857 CFAP70Q5T0N1 1121 aa15.68■□□□□ 0.1
SLC12A4-215ENST00000575857 XRN1Q8IZH2 1706 aaKnown RBP15.68■□□□□ 0.1
SLC12A4-215ENST00000575857 ROBO1Q9Y6N7 1651 aa15.67■□□□□ 0.1
SLC12A4-215ENST00000575857 AMOTL2Q9Y2J4 779 aa15.67■□□□□ 0.1
SLC12A4-215ENST00000575857 ADGRB1O14514 1584 aa15.65■□□□□ 0.1
SLC12A4-215ENST00000575857 LAMC1P11047 1609 aa15.65■□□□□ 0.1
SLC12A4-215ENST00000575857 TMEM132EQ6IEE7 984 aa15.64■□□□□ 0.09
SLC12A4-215ENST00000575857 SLAIN2Q9P270 581 aa15.64■□□□□ 0.09
SLC12A4-215ENST00000575857 LRPPRCP42704 1394 aaKnown RBP15.63■□□□□ 0.09
SLC12A4-215ENST00000575857 MSH6P52701 1360 aa15.63■□□□□ 0.09
SLC12A4-215ENST00000575857 TECPR2O15040 1411 aa15.63■□□□□ 0.09
SLC12A4-215ENST00000575857 CCER1Q8TC90 406 aaPredicted RBP15.63■□□□□ 0.09
SLC12A4-215ENST00000575857 TONSLQ96HA7 1378 aa15.62■□□□□ 0.09
SLC12A4-215ENST00000575857 ABCC11Q96J66 1382 aa15.62■□□□□ 0.09
SLC12A4-215ENST00000575857 PTCH1Q13635 1447 aa15.62■□□□□ 0.09
SLC12A4-215ENST00000575857 ROBO2Q9HCK4 1378 aa15.62■□□□□ 0.09
SLC12A4-215ENST00000575857 YTHDC2Q9H6S0 1430 aaKnown RBP15.61■□□□□ 0.09
SLC12A4-215ENST00000575857 NCOA3Q9Y6Q9 1424 aa15.6■□□□□ 0.09
SLC12A4-215ENST00000575857 NBPF8Q3BBV2 869 aa15.6■□□□□ 0.09
SLC12A4-215ENST00000575857 KIAA1210Q9ULL0 1709 aa15.6■□□□□ 0.09
SLC12A4-215ENST00000575857 KNDC1Q76NI1 1749 aa15.58■□□□□ 0.08
SLC12A4-215ENST00000575857 NBPF1Q3BBV0 1214 aa15.58■□□□□ 0.08
SLC12A4-215ENST00000575857 TIMELESSQ9UNS1 1208 aa15.58■□□□□ 0.08
SLC12A4-215ENST00000575857 C14orf37Q86TY3 774 aa15.57■□□□□ 0.08
SLC12A4-215ENST00000575857 SIRT1Q96EB6 747 aa15.57■□□□□ 0.08
SLC12A4-215ENST00000575857 STK26Q9P289 416 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms