RNA–Protein interactions for RNA: ENST00000575707.5

TRAP1-213, Transcript of TNF receptor associated protein 1, humanhuman

TSL 5

Gene TRAP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-213ENST00000575707 KCNA6P17658 529 aa25.24■■□□□ 1.63
TRAP1-213ENST00000575707 SLC26A8Q96RN1 970 aa25.24■■□□□ 1.63
TRAP1-213ENST00000575707 RRBP1Q9P2E9 1410 aaKnown RBP25.22■■□□□ 1.63
TRAP1-213ENST00000575707 RIMS2Q9UQ26 1411 aa25.22■■□□□ 1.63
TRAP1-213ENST00000575707 PLEKHG1Q9ULL1 1385 aa25.21■■□□□ 1.63
TRAP1-213ENST00000575707 HDGFP51858 240 aaKnown RBP25.21■■□□□ 1.63
TRAP1-213ENST00000575707 NWD1Q149M9 1564 aa25.21■■□□□ 1.63
TRAP1-213ENST00000575707 NKTRP30414 1462 aaKnown RBP25.19■■□□□ 1.62
TRAP1-213ENST00000575707 TMEM94Q12767 1356 aa25.18■■□□□ 1.62
TRAP1-213ENST00000575707 PPP1R15AO75807 674 aaPredicted RBP25.17■■□□□ 1.62
TRAP1-213ENST00000575707 BCANQ96GW7 911 aa25.17■■□□□ 1.62
TRAP1-213ENST00000575707 MED1Q15648 1581 aaPredicted RBP25.17■■□□□ 1.62
TRAP1-213ENST00000575707 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.16■■□□□ 1.62
TRAP1-213ENST00000575707 CHGAP10645 457 aaKnown RBP25.15■■□□□ 1.62
TRAP1-213ENST00000575707 SOCS7O14512 581 aa25.14■■□□□ 1.62
TRAP1-213ENST00000575707 PROSER2Q86WR7 435 aaPredicted RBP25.14■■□□□ 1.62
TRAP1-213ENST00000575707 CHD2O14647 1828 aaKnown RBP25.14■■□□□ 1.61
TRAP1-213ENST00000575707 SPHKAPQ2M3C7 1700 aa25.12■■□□□ 1.61
TRAP1-213ENST00000575707 TBX22Q9Y458 520 aa25.11■■□□□ 1.61
TRAP1-213ENST00000575707 NAIPQ13075 1403 aa25.1■■□□□ 1.61
TRAP1-213ENST00000575707 FAM135BQ49AJ0 1406 aa25.1■■□□□ 1.61
TRAP1-213ENST00000575707 DIP2AQ14689 1571 aa25.1■■□□□ 1.61
TRAP1-213ENST00000575707 SENP3Q9H4L4 574 aaPredicted RBP25.09■■□□□ 1.61
TRAP1-213ENST00000575707 ADAMTS13Q76LX8 1427 aa25.08■■□□□ 1.61
TRAP1-213ENST00000575707 RBM33Q96EV2 1170 aaKnown RBP25.07■■□□□ 1.6
TRAP1-213ENST00000575707 MSH6P52701 1360 aa25.05■■□□□ 1.6
TRAP1-213ENST00000575707 NUTM2DQ5VT03 806 aaPredicted RBP25.04■■□□□ 1.6
TRAP1-213ENST00000575707 PIK3R4Q99570 1358 aa25.04■■□□□ 1.6
TRAP1-213ENST00000575707 ROBO1Q9Y6N7 1651 aa25.03■■□□□ 1.6
TRAP1-213ENST00000575707 HFM1A2PYH4 1435 aa25.02■■□□□ 1.6
TRAP1-213ENST00000575707 NCOA3Q9Y6Q9 1424 aa25.02■■□□□ 1.6
TRAP1-213ENST00000575707 TRPM2O94759 1503 aa25■■□□□ 1.59
TRAP1-213ENST00000575707 CLTCL1P53675 1640 aa24.99■■□□□ 1.59
TRAP1-213ENST00000575707 SETBP1Q9Y6X0 1596 aa24.97■■□□□ 1.59
TRAP1-213ENST00000575707 NRXN3Q9Y4C0 1643 aa24.97■■□□□ 1.59
TRAP1-213ENST00000575707 PHF23Q9BUL5 403 aaPredicted RBP24.96■■□□□ 1.59
TRAP1-213ENST00000575707 ZNF326Q5BKZ1 582 aaKnown RBP24.95■■□□□ 1.58
TRAP1-213ENST00000575707 SLAIN2Q9P270 581 aa24.95■■□□□ 1.58
TRAP1-213ENST00000575707 KIF1BO60333 1816 aa24.93■■□□□ 1.58
TRAP1-213ENST00000575707 PTPRUQ92729 1446 aa24.93■■□□□ 1.58
TRAP1-213ENST00000575707 NEXMIFQ5QGS0 1516 aa24.92■■□□□ 1.58
TRAP1-213ENST00000575707 AMOTL2Q9Y2J4 779 aa24.91■■□□□ 1.58
TRAP1-213ENST00000575707 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.9■■□□□ 1.58
TRAP1-213ENST00000575707 TRIM52Q96A61 297 aa24.9■■□□□ 1.58
TRAP1-213ENST00000575707 XRN1Q8IZH2 1706 aaKnown RBP24.89■■□□□ 1.58
TRAP1-213ENST00000575707 C14orf37Q86TY3 774 aa24.89■■□□□ 1.58
TRAP1-213ENST00000575707 C19orf44Q9H6X5 657 aa24.89■■□□□ 1.58
TRAP1-213ENST00000575707 PHLPP1O60346 1717 aa24.87■■□□□ 1.57
TRAP1-213ENST00000575707 CADPS2Q86UW7 1296 aa24.87■■□□□ 1.57
TRAP1-213ENST00000575707 SLC4A1APQ9BWU0 796 aaKnown RBP24.86■■□□□ 1.57
TRAP1-213ENST00000575707 METP08581 1390 aa24.84■■□□□ 1.57
TRAP1-213ENST00000575707 ATF3P18847 181 aa24.84■■□□□ 1.57
TRAP1-213ENST00000575707 DCCP43146 1447 aa24.82■■□□□ 1.56
TRAP1-213ENST00000575707 COL16A1Q07092 1604 aaPredicted RBP24.81■■□□□ 1.56
TRAP1-213ENST00000575707 RGS17Q9UGC6 210 aaPredicted RBP24.8■■□□□ 1.56
TRAP1-213ENST00000575707 AHDC1Q5TGY3 1603 aaPredicted RBP24.79■■□□□ 1.56
TRAP1-213ENST00000575707 JCADQ9P266 1359 aa24.79■■□□□ 1.56
TRAP1-213ENST00000575707 VGFO15240 615 aaPredicted RBP24.78■■□□□ 1.56
TRAP1-213ENST00000575707 RPGRIP1LQ68CZ1 1315 aa24.78■■□□□ 1.56
TRAP1-213ENST00000575707 SETD1AO15047 1707 aaKnown RBP24.76■■□□□ 1.55
TRAP1-213ENST00000575707 PPLO60437 1756 aa24.75■■□□□ 1.55
TRAP1-213ENST00000575707 ADGRL3Q9HAR2 1447 aa24.73■■□□□ 1.55
TRAP1-213ENST00000575707 FOXD1Q16676 465 aa24.72■■□□□ 1.55
TRAP1-213ENST00000575707 BRINP3Q76B58 766 aa24.72■■□□□ 1.55
TRAP1-213ENST00000575707 MST1RQ04912 1400 aa24.71■■□□□ 1.55
TRAP1-213ENST00000575707 NALCNQ8IZF0 1738 aa24.71■■□□□ 1.55
TRAP1-213ENST00000575707 PTCH1Q13635 1447 aa24.7■■□□□ 1.55
TRAP1-213ENST00000575707 CCDC144AA2RUR9 1427 aa24.69■■□□□ 1.54
TRAP1-213ENST00000575707 ASXL1Q8IXJ9 1541 aa24.69■■□□□ 1.54
TRAP1-213ENST00000575707 PRAG1Q86YV5 1406 aa24.69■■□□□ 1.54
TRAP1-213ENST00000575707 SHPRHQ149N8 1683 aa24.69■■□□□ 1.54
TRAP1-213ENST00000575707 SPATA31A6Q5VVP1 1343 aa24.68■■□□□ 1.54
TRAP1-213ENST00000575707 MPHOSPH9Q99550 1183 aa24.68■■□□□ 1.54
TRAP1-213ENST00000575707 ACIN1Q9UKV3 1341 aaKnown RBP24.67■■□□□ 1.54
TRAP1-213ENST00000575707 NHSL1Q5SYE7 1610 aa24.65■■□□□ 1.54
TRAP1-213ENST00000575707 POTEAQ6S8J7 498 aa24.65■■□□□ 1.54
TRAP1-213ENST00000575707 SPATA31E1Q6ZUB1 1445 aa24.65■■□□□ 1.54
TRAP1-213ENST00000575707 ROBO2Q9HCK4 1378 aa24.64■■□□□ 1.53
TRAP1-213ENST00000575707 LRP6O75581 1613 aa24.63■■□□□ 1.53
TRAP1-213ENST00000575707 IFT172Q9UG01 1749 aa24.62■■□□□ 1.53
TRAP1-213ENST00000575707 SETD5Q9C0A6 1442 aa24.61■■□□□ 1.53
TRAP1-213ENST00000575707 ANKRD30BQ9BXX2 1392 aa24.6■■□□□ 1.53
TRAP1-213ENST00000575707 ADGRF5Q8IZF2 1346 aa24.59■■□□□ 1.53
TRAP1-213ENST00000575707 C1orf167Q5SNV9 1468 aa24.58■■□□□ 1.53
TRAP1-213ENST00000575707 RGL3Q3MIN7 710 aa24.58■■□□□ 1.53
TRAP1-213ENST00000575707 LAMC1P11047 1609 aa24.55■■□□□ 1.52
TRAP1-213ENST00000575707 MEX3CQ5U5Q3 659 aaKnown RBP24.55■■□□□ 1.52
TRAP1-213ENST00000575707 LRRC59Q96AG4 307 aaKnown RBP24.55■■□□□ 1.52
TRAP1-213ENST00000575707 TECPR2O15040 1411 aa24.52■■□□□ 1.52
TRAP1-213ENST00000575707 PIK3C2GO75747 1445 aa24.52■■□□□ 1.52
TRAP1-213ENST00000575707 DDX17Q92841 729 aaKnown RBP24.52■■□□□ 1.52
TRAP1-213ENST00000575707 RAB3GAP2Q9H2M9 1393 aa24.52■■□□□ 1.52
TRAP1-213ENST00000575707 ZNF772Q68DY9 489 aaPredicted RBP24.51■■□□□ 1.51
TRAP1-213ENST00000575707 CDC42BPGQ6DT37 1551 aa24.5■■□□□ 1.51
TRAP1-213ENST00000575707 KNDC1Q76NI1 1749 aa24.49■■□□□ 1.51
TRAP1-213ENST00000575707 LRPPRCP42704 1394 aaKnown RBP24.49■■□□□ 1.51
TRAP1-213ENST00000575707 PNPLA6Q8IY17 1366 aa24.48■■□□□ 1.51
TRAP1-213ENST00000575707 ABCC11Q96J66 1382 aa24.48■■□□□ 1.51
TRAP1-213ENST00000575707 NUTM2BA6NNL0 878 aaPredicted RBP24.47■■□□□ 1.51
TRAP1-213ENST00000575707 NUTM2EB1AL46 878 aaPredicted RBP24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms