RNA–Protein interactions for RNA: ENST00000575483.5

CDC27-217, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-217ENST00000575483 ADGRB3O60242 1522 aa21.71■■□□□ 1.07
CDC27-217ENST00000575483 IDI1Q13907 227 aa21.71■■□□□ 1.07
CDC27-217ENST00000575483 ANKRD50Q9ULJ7 1429 aa21.69■■□□□ 1.06
CDC27-217ENST00000575483 RPRD2Q5VT52 1461 aaKnown RBP21.69■■□□□ 1.06
CDC27-217ENST00000575483 UNC13BO14795 1591 aa21.68■■□□□ 1.06
CDC27-217ENST00000575483 MYO5BQ9ULV0 1848 aa21.68■■□□□ 1.06
CDC27-217ENST00000575483 GCC2Q8IWJ2 1684 aa21.66■■□□□ 1.06
CDC27-217ENST00000575483 EID1Q9Y6B2 187 aa21.65■■□□□ 1.06
CDC27-217ENST00000575483 NWD1Q149M9 1564 aa21.64■■□□□ 1.05
CDC27-217ENST00000575483 FAM50AQ14320 339 aaKnown RBP21.63■■□□□ 1.05
CDC27-217ENST00000575483 ZFYVE9O95405 1425 aa21.62■■□□□ 1.05
CDC27-217ENST00000575483 TMEM131LA2VDJ0 1609 aa21.62■■□□□ 1.05
CDC27-217ENST00000575483 E9PCH4 1651 aa21.6■■□□□ 1.05
CDC27-217ENST00000575483 SLC52A1Q9NWF4 448 aa21.6■■□□□ 1.05
CDC27-217ENST00000575483 STAG3Q9UJ98 1225 aa21.59■■□□□ 1.05
CDC27-217ENST00000575483 IQGAP3Q86VI3 1631 aa21.58■■□□□ 1.05
CDC27-217ENST00000575483 ROCK1Q13464 1354 aa21.58■■□□□ 1.04
CDC27-217ENST00000575483 TMEM94Q12767 1356 aa21.57■■□□□ 1.04
CDC27-217ENST00000575483 NKTRP30414 1462 aaKnown RBP21.57■■□□□ 1.04
CDC27-217ENST00000575483 KCNA6P17658 529 aa21.56■■□□□ 1.04
CDC27-217ENST00000575483 CHD2O14647 1828 aaKnown RBP21.55■■□□□ 1.04
CDC27-217ENST00000575483 SLC26A8Q96RN1 970 aa21.55■■□□□ 1.04
CDC27-217ENST00000575483 FAM135BQ49AJ0 1406 aa21.53■■□□□ 1.04
CDC27-217ENST00000575483 PLEKHG1Q9ULL1 1385 aa21.52■■□□□ 1.04
CDC27-217ENST00000575483 ROBO1Q9Y6N7 1651 aa21.51■■□□□ 1.03
CDC27-217ENST00000575483 RIMS2Q9UQ26 1411 aa21.51■■□□□ 1.03
CDC27-217ENST00000575483 RBM33Q96EV2 1170 aaKnown RBP21.47■■□□□ 1.03
CDC27-217ENST00000575483 ADAMTS13Q76LX8 1427 aa21.46■■□□□ 1.03
CDC27-217ENST00000575483 PROSER2Q86WR7 435 aaPredicted RBP21.45■■□□□ 1.02
CDC27-217ENST00000575483 DIP2AQ14689 1571 aa21.44■■□□□ 1.02
CDC27-217ENST00000575483 RGS17Q9UGC6 210 aaPredicted RBP21.42■■□□□ 1.02
CDC27-217ENST00000575483 SPHKAPQ2M3C7 1700 aa21.41■■□□□ 1.02
CDC27-217ENST00000575483 NUP155O75694 1391 aa21.41■■□□□ 1.02
CDC27-217ENST00000575483 TBX22Q9Y458 520 aa21.41■■□□□ 1.02
CDC27-217ENST00000575483 NRXN3Q9Y4C0 1643 aa21.4■■□□□ 1.02
CDC27-217ENST00000575483 MSH6P52701 1360 aa21.38■■□□□ 1.01
CDC27-217ENST00000575483 NCOA3Q9Y6Q9 1424 aa21.38■■□□□ 1.01
CDC27-217ENST00000575483 PPP1R15AO75807 674 aaPredicted RBP21.37■■□□□ 1.01
CDC27-217ENST00000575483 HDGFP51858 240 aaKnown RBP21.37■■□□□ 1.01
CDC27-217ENST00000575483 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.37■■□□□ 1.01
CDC27-217ENST00000575483 PIK3R4Q99570 1358 aa21.36■■□□□ 1.01
CDC27-217ENST00000575483 PHLPP1O60346 1717 aa21.36■■□□□ 1.01
CDC27-217ENST00000575483 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.36■■□□□ 1.01
CDC27-217ENST00000575483 BCANQ96GW7 911 aa21.36■■□□□ 1.01
CDC27-217ENST00000575483 PPARGC1BQ86YN6 1023 aaKnown RBP21.35■■□□□ 1.01
CDC27-217ENST00000575483 COL16A1Q07092 1604 aaPredicted RBP21.35■■□□□ 1.01
CDC27-217ENST00000575483 SLC4A2P04920 1241 aa21.34■■□□□ 1.01
CDC27-217ENST00000575483 CHGAP10645 457 aaKnown RBP21.34■■□□□ 1.01
CDC27-217ENST00000575483 ITGAEP38570 1179 aa21.34■■□□□ 1.01
CDC27-217ENST00000575483 NUTM2DQ5VT03 806 aaPredicted RBP21.34■■□□□ 1.01
CDC27-217ENST00000575483 SLAIN2Q9P270 581 aa21.34■■□□□ 1.01
CDC27-217ENST00000575483 PTPRUQ92729 1446 aa21.34■■□□□ 1.01
CDC27-217ENST00000575483 RRBP1Q9P2E9 1410 aaKnown RBP21.34■■□□□ 1.01
CDC27-217ENST00000575483 SETBP1Q9Y6X0 1596 aa21.34■■□□□ 1.01
CDC27-217ENST00000575483 XRN1Q8IZH2 1706 aaKnown RBP21.34■■□□□ 1.01
CDC27-217ENST00000575483 TRPM2O94759 1503 aa21.34■■□□□ 1.01
CDC27-217ENST00000575483 CLTCL1P53675 1640 aa21.31■■□□□ 1
CDC27-217ENST00000575483 NAIPQ13075 1403 aa21.29■■□□□ 1
CDC27-217ENST00000575483 AHDC1Q5TGY3 1603 aaPredicted RBP21.28■■□□□ 1
CDC27-217ENST00000575483 NEXMIFQ5QGS0 1516 aa21.28■■□□□ 1
CDC27-217ENST00000575483 POTEAQ6S8J7 498 aa21.25■□□□□ 0.99
CDC27-217ENST00000575483 JCADQ9P266 1359 aa21.24■□□□□ 0.99
CDC27-217ENST00000575483 AMOTL2Q9Y2J4 779 aa21.24■□□□□ 0.99
CDC27-217ENST00000575483 KIF1BO60333 1816 aa21.23■□□□□ 0.99
CDC27-217ENST00000575483 C19orf44Q9H6X5 657 aa21.23■□□□□ 0.99
CDC27-217ENST00000575483 SHPRHQ149N8 1683 aa21.23■□□□□ 0.99
CDC27-217ENST00000575483 DCCP43146 1447 aa21.22■□□□□ 0.99
CDC27-217ENST00000575483 SETD1AO15047 1707 aaKnown RBP21.22■□□□□ 0.99
CDC27-217ENST00000575483 LRP6O75581 1613 aa21.22■□□□□ 0.99
CDC27-217ENST00000575483 METP08581 1390 aa21.22■□□□□ 0.99
CDC27-217ENST00000575483 CADPS2Q86UW7 1296 aa21.21■□□□□ 0.99
CDC27-217ENST00000575483 NALCNQ8IZF0 1738 aa21.19■□□□□ 0.98
CDC27-217ENST00000575483 HFM1A2PYH4 1435 aa21.19■□□□□ 0.98
CDC27-217ENST00000575483 C14orf37Q86TY3 774 aa21.18■□□□□ 0.98
CDC27-217ENST00000575483 NHSL1Q5SYE7 1610 aa21.18■□□□□ 0.98
CDC27-217ENST00000575483 MST1RQ04912 1400 aa21.17■□□□□ 0.98
CDC27-217ENST00000575483 ASXL1Q8IXJ9 1541 aa21.16■□□□□ 0.98
CDC27-217ENST00000575483 ATF3P18847 181 aa21.16■□□□□ 0.98
CDC27-217ENST00000575483 BRINP3Q76B58 766 aa21.16■□□□□ 0.98
CDC27-217ENST00000575483 ZNF326Q5BKZ1 582 aaKnown RBP21.14■□□□□ 0.97
CDC27-217ENST00000575483 FOXD4L1Q9NU39 408 aa21.14■□□□□ 0.97
CDC27-217ENST00000575483 ADGRL3Q9HAR2 1447 aa21.13■□□□□ 0.97
CDC27-217ENST00000575483 SPATA31A6Q5VVP1 1343 aa21.13■□□□□ 0.97
CDC27-217ENST00000575483 RNF39Q9H2S5 420 aa21.13■□□□□ 0.97
CDC27-217ENST00000575483 PPLO60437 1756 aa21.13■□□□□ 0.97
CDC27-217ENST00000575483 PRAG1Q86YV5 1406 aa21.12■□□□□ 0.97
CDC27-217ENST00000575483 SETD5Q9C0A6 1442 aa21.1■□□□□ 0.97
CDC27-217ENST00000575483 LAMC1P11047 1609 aa21.09■□□□□ 0.97
CDC27-217ENST00000575483 PTCH1Q13635 1447 aa21.09■□□□□ 0.97
CDC27-217ENST00000575483 ZBTB22O15209 634 aa21.04■□□□□ 0.96
CDC27-217ENST00000575483 ROBO2Q9HCK4 1378 aa21.04■□□□□ 0.96
CDC27-217ENST00000575483 IFT172Q9UG01 1749 aa21.03■□□□□ 0.96
CDC27-217ENST00000575483 U3KPZ7 1027 aaPredicted RBP21.02■□□□□ 0.96
CDC27-217ENST00000575483 RPGRIP1LQ68CZ1 1315 aa21.02■□□□□ 0.95
CDC27-217ENST00000575483 C1orf167Q5SNV9 1468 aa21.01■□□□□ 0.95
CDC27-217ENST00000575483 VGFO15240 615 aaPredicted RBP21.01■□□□□ 0.95
CDC27-217ENST00000575483 TRIM52Q96A61 297 aa21.01■□□□□ 0.95
CDC27-217ENST00000575483 DDX17Q92841 729 aaKnown RBP20.99■□□□□ 0.95
CDC27-217ENST00000575483 PNPLA6Q8IY17 1366 aa20.98■□□□□ 0.95
CDC27-217ENST00000575483 SPATA31E1Q6ZUB1 1445 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms