RNA–Protein interactions for RNA: ENST00000575113.1

RFWD3-208, Transcript of ring finger and WD repeat domain 3, human

TSL 3

Gene RFWD3, Length 706 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFWD3-208	ENST00000575113	MED1	Q15648	1581 aa	Predicted RBP	32.96	■■■□□ 2.87
RFWD3-208	ENST00000575113	PROSER2	Q86WR7	435 aa	Predicted RBP	32.96	■■■□□ 2.87
RFWD3-208	ENST00000575113	TMEM94	Q12767	1356 aa		32.96	■■■□□ 2.87
RFWD3-208	ENST00000575113	GCC2	Q8IWJ2	1684 aa		32.94	■■■□□ 2.86
RFWD3-208	ENST00000575113	NUP155	O75694	1391 aa		32.94	■■■□□ 2.86
RFWD3-208	ENST00000575113	RIMS2	Q9UQ26	1411 aa		32.93	■■■□□ 2.86
RFWD3-208	ENST00000575113	ZFYVE9	O95405	1425 aa		32.91	■■■□□ 2.86
RFWD3-208	ENST00000575113	PLEKHG1	Q9ULL1	1385 aa		32.9	■■■□□ 2.86
RFWD3-208	ENST00000575113	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.89	■■■□□ 2.86
RFWD3-208	ENST00000575113	PHF23	Q9BUL5	403 aa	Predicted RBP	32.89	■■■□□ 2.86
RFWD3-208	ENST00000575113	RBM33	Q96EV2	1170 aa	Known RBP	32.88	■■■□□ 2.85
RFWD3-208	ENST00000575113	IQGAP3	Q86VI3	1631 aa		32.88	■■■□□ 2.85
RFWD3-208	ENST00000575113	TMEM131L	A2VDJ0	1609 aa		32.87	■■■□□ 2.85
RFWD3-208	ENST00000575113	XIRP1	Q702N8	1843 aa	Known RBP	32.86	■■■□□ 2.85
RFWD3-208	ENST00000575113		E9PCH4	1651 aa		32.86	■■■□□ 2.85
RFWD3-208	ENST00000575113	NKTR	P30414	1462 aa	Known RBP	32.86	■■■□□ 2.85
RFWD3-208	ENST00000575113	NWD1	Q149M9	1564 aa		32.81	■■■□□ 2.84
RFWD3-208	ENST00000575113	FAM135B	Q49AJ0	1406 aa		32.81	■■■□□ 2.84
RFWD3-208	ENST00000575113	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.81	■■■□□ 2.84
RFWD3-208	ENST00000575113	MYO5B	Q9ULV0	1848 aa		32.81	■■■□□ 2.84
RFWD3-208	ENST00000575113	TBX22	Q9Y458	520 aa		32.79	■■■□□ 2.84
RFWD3-208	ENST00000575113	MSH6	P52701	1360 aa		32.79	■■■□□ 2.84
RFWD3-208	ENST00000575113	C14orf37	Q86TY3	774 aa		32.7	■■■□□ 2.83
RFWD3-208	ENST00000575113	RRBP1	Q9P2E9	1410 aa	Known RBP	32.69	■■■□□ 2.82
RFWD3-208	ENST00000575113	ADAMTS13	Q76LX8	1427 aa		32.68	■■■□□ 2.82
RFWD3-208	ENST00000575113	SLAIN2	Q9P270	581 aa		32.68	■■■□□ 2.82
RFWD3-208	ENST00000575113	CHD2	O14647	1828 aa	Known RBP	32.67	■■■□□ 2.82
RFWD3-208	ENST00000575113	ROBO1	Q9Y6N7	1651 aa		32.66	■■■□□ 2.82
RFWD3-208	ENST00000575113	ZNF326	Q5BKZ1	582 aa	Known RBP	32.66	■■■□□ 2.82
RFWD3-208	ENST00000575113	DIP2A	Q14689	1571 aa		32.66	■■■□□ 2.82
RFWD3-208	ENST00000575113	PIK3R4	Q99570	1358 aa		32.65	■■■□□ 2.82
RFWD3-208	ENST00000575113	NCOA3	Q9Y6Q9	1424 aa		32.63	■■■□□ 2.81
RFWD3-208	ENST00000575113	SPHKAP	Q2M3C7	1700 aa		32.6	■■■□□ 2.81
RFWD3-208	ENST00000575113	NAIP	Q13075	1403 aa		32.6	■■■□□ 2.81
RFWD3-208	ENST00000575113	AMOTL2	Q9Y2J4	779 aa		32.59	■■■□□ 2.81
RFWD3-208	ENST00000575113	TRPM2	O94759	1503 aa		32.59	■■■□□ 2.81
RFWD3-208	ENST00000575113	ATF3	P18847	181 aa		32.56	■■■□□ 2.8
RFWD3-208	ENST00000575113	TRIM52	Q96A61	297 aa		32.56	■■■□□ 2.8
RFWD3-208	ENST00000575113	C19orf44	Q9H6X5	657 aa		32.56	■■■□□ 2.8
RFWD3-208	ENST00000575113	CADPS2	Q86UW7	1296 aa		32.55	■■■□□ 2.8
RFWD3-208	ENST00000575113	PTPRU	Q92729	1446 aa		32.51	■■■□□ 2.79
RFWD3-208	ENST00000575113	RGS17	Q9UGC6	210 aa	Predicted RBP	32.5	■■■□□ 2.79
RFWD3-208	ENST00000575113	HFM1	A2PYH4	1435 aa		32.48	■■■□□ 2.79
RFWD3-208	ENST00000575113	SETBP1	Q9Y6X0	1596 aa		32.48	■■■□□ 2.79
RFWD3-208	ENST00000575113	PHLPP1	O60346	1717 aa		32.47	■■■□□ 2.79
RFWD3-208	ENST00000575113	CLTCL1	P53675	1640 aa		32.47	■■■□□ 2.79
RFWD3-208	ENST00000575113	JCAD	Q9P266	1359 aa		32.46	■■■□□ 2.79
RFWD3-208	ENST00000575113	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.44	■■■□□ 2.78
RFWD3-208	ENST00000575113	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.43	■■■□□ 2.78
RFWD3-208	ENST00000575113	NRXN3	Q9Y4C0	1643 aa		32.43	■■■□□ 2.78
RFWD3-208	ENST00000575113	MET	P08581	1390 aa		32.42	■■■□□ 2.78
RFWD3-208	ENST00000575113	NEXMIF	Q5QGS0	1516 aa		32.4	■■■□□ 2.78
RFWD3-208	ENST00000575113	DCC	P43146	1447 aa		32.37	■■■□□ 2.77
RFWD3-208	ENST00000575113	VGF	O15240	615 aa	Predicted RBP	32.37	■■■□□ 2.77
RFWD3-208	ENST00000575113	XRN1	Q8IZH2	1706 aa	Known RBP	32.37	■■■□□ 2.77
RFWD3-208	ENST00000575113	COL16A1	Q07092	1604 aa	Predicted RBP	32.36	■■■□□ 2.77
RFWD3-208	ENST00000575113	KIF1B	O60333	1816 aa		32.35	■■■□□ 2.77
RFWD3-208	ENST00000575113	POTEA	Q6S8J7	498 aa		32.35	■■■□□ 2.77
RFWD3-208	ENST00000575113	BRINP3	Q76B58	766 aa		32.34	■■■□□ 2.77
RFWD3-208	ENST00000575113	SPATA31A6	Q5VVP1	1343 aa		32.31	■■■□□ 2.76
RFWD3-208	ENST00000575113	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32.31	■■■□□ 2.76
RFWD3-208	ENST00000575113	RPGRIP1L	Q68CZ1	1315 aa		32.3	■■■□□ 2.76
RFWD3-208	ENST00000575113	MEX3C	Q5U5Q3	659 aa	Known RBP	32.29	■■■□□ 2.76
RFWD3-208	ENST00000575113	ADGRL3	Q9HAR2	1447 aa		32.26	■■■□□ 2.76
RFWD3-208	ENST00000575113	MST1R	Q04912	1400 aa		32.26	■■■□□ 2.75
RFWD3-208	ENST00000575113	FOXD1	Q16676	465 aa		32.25	■■■□□ 2.75
RFWD3-208	ENST00000575113	ASXL1	Q8IXJ9	1541 aa		32.23	■■■□□ 2.75
RFWD3-208	ENST00000575113	LRP6	O75581	1613 aa		32.2	■■■□□ 2.75
RFWD3-208	ENST00000575113	CCDC144A	A2RUR9	1427 aa		32.18	■■■□□ 2.74
RFWD3-208	ENST00000575113	PTCH1	Q13635	1447 aa		32.18	■■■□□ 2.74
RFWD3-208	ENST00000575113	NUTM2B	A6NNL0	878 aa	Predicted RBP	32.18	■■■□□ 2.74
RFWD3-208	ENST00000575113	NUTM2E	B1AL46	878 aa	Predicted RBP	32.18	■■■□□ 2.74
RFWD3-208	ENST00000575113	NUTM2A	Q8IVF1	878 aa	Predicted RBP	32.18	■■■□□ 2.74
RFWD3-208	ENST00000575113	SHPRH	Q149N8	1683 aa		32.17	■■■□□ 2.74
RFWD3-208	ENST00000575113	MPHOSPH9	Q99550	1183 aa		32.16	■■■□□ 2.74
RFWD3-208	ENST00000575113	ROBO2	Q9HCK4	1378 aa		32.16	■■■□□ 2.74
RFWD3-208	ENST00000575113	RGL3	Q3MIN7	710 aa		32.15	■■■□□ 2.74
RFWD3-208	ENST00000575113	ZNF772	Q68DY9	489 aa	Predicted RBP	32.15	■■■□□ 2.74
RFWD3-208	ENST00000575113	LRRC59	Q96AG4	307 aa	Known RBP	32.15	■■■□□ 2.74
RFWD3-208	ENST00000575113	NALCN	Q8IZF0	1738 aa		32.14	■■■□□ 2.74
RFWD3-208	ENST00000575113	SETD5	Q9C0A6	1442 aa		32.13	■■■□□ 2.73
RFWD3-208	ENST00000575113	DDX17	Q92841	729 aa	Known RBP	32.11	■■■□□ 2.73
RFWD3-208	ENST00000575113	PPL	O60437	1756 aa		32.1	■■■□□ 2.73
RFWD3-208	ENST00000575113	SETD1A	O15047	1707 aa	Known RBP	32.1	■■■□□ 2.73
RFWD3-208	ENST00000575113	C1orf167	Q5SNV9	1468 aa		32.1	■■■□□ 2.73
RFWD3-208	ENST00000575113	NHSL1	Q5SYE7	1610 aa		32.08	■■■□□ 2.73
RFWD3-208	ENST00000575113	ADGRF5	Q8IZF2	1346 aa		32.07	■■■□□ 2.72
RFWD3-208	ENST00000575113	PRAG1	Q86YV5	1406 aa		32.07	■■■□□ 2.72
RFWD3-208	ENST00000575113	ACIN1	Q9UKV3	1341 aa	Known RBP	32.06	■■■□□ 2.72
RFWD3-208	ENST00000575113	ANKRD30B	Q9BXX2	1392 aa		32.06	■■■□□ 2.72
RFWD3-208	ENST00000575113	SPATA31E1	Q6ZUB1	1445 aa		32.03	■■■□□ 2.72
RFWD3-208	ENST00000575113	ORAI2	Q96SN7	254 aa		32.03	■■■□□ 2.72
RFWD3-208	ENST00000575113	STK26	Q9P289	416 aa		32.02	■■■□□ 2.72
RFWD3-208	ENST00000575113	PNPLA6	Q8IY17	1366 aa		32.01	■■■□□ 2.71
RFWD3-208	ENST00000575113	AFF2	P51816	1311 aa		32	■■■□□ 2.71
RFWD3-208	ENST00000575113	RXRB	P28702	533 aa		31.98	■■■□□ 2.71
RFWD3-208	ENST00000575113	C8orf37	Q96NL8	207 aa		31.97	■■■□□ 2.71
RFWD3-208	ENST00000575113	SOS2	Q07890	1332 aa	Predicted RBP	31.94	■■■□□ 2.7
RFWD3-208	ENST00000575113	LRPPRC	P42704	1394 aa	Known RBP	31.94	■■■□□ 2.7
RFWD3-208	ENST00000575113	ESCO1	Q5FWF5	840 aa		31.93	■■■□□ 2.7

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms