RNA–Protein interactions for RNA: ENST00000574909.1

RNF213-219, Transcript of ring finger protein 213, humanhuman

TSL 3

Gene RNF213, Length 298 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-219ENST00000574909 MAP3K1Q13233 1512 aa11.6□□□□□ -0.55
RNF213-219ENST00000574909 CEP152O94986 1710 aa11.6□□□□□ -0.55
RNF213-219ENST00000574909 TET3O43151 1660 aa11.6□□□□□ -0.55
RNF213-219ENST00000574909 ZNF316A6NFI3 1004 aaPredicted RBP11.6□□□□□ -0.55
RNF213-219ENST00000574909 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.6□□□□□ -0.55
RNF213-219ENST00000574909 PIK3C2BO00750 1634 aa11.6□□□□□ -0.55
RNF213-219ENST00000574909 FGD6Q6ZV73 1430 aa11.6□□□□□ -0.55
RNF213-219ENST00000574909 MEX3CQ5U5Q3 659 aaKnown RBP11.59□□□□□ -0.55
RNF213-219ENST00000574909 LMTK2Q8IWU2 1503 aa11.59□□□□□ -0.55
RNF213-219ENST00000574909 NWD1Q149M9 1564 aa11.58□□□□□ -0.55
RNF213-219ENST00000574909 UPF1Q92900 1129 aaKnown RBP eCLIP11.58□□□□□ -0.56
RNF213-219ENST00000574909 RRP7BPQ9NSQ0 103 aa11.58□□□□□ -0.56
RNF213-219ENST00000574909 PHLPP1O60346 1717 aa11.56□□□□□ -0.56
RNF213-219ENST00000574909 RXRBP28702 533 aa11.56□□□□□ -0.56
RNF213-219ENST00000574909 CADPS2Q86UW7 1296 aa11.56□□□□□ -0.56
RNF213-219ENST00000574909 VPS8Q8N3P4 1428 aa11.56□□□□□ -0.56
RNF213-219ENST00000574909 RBM33Q96EV2 1170 aaKnown RBP11.56□□□□□ -0.56
RNF213-219ENST00000574909 CFAP65Q6ZU64 1925 aaKnown RBP11.56□□□□□ -0.56
RNF213-219ENST00000574909 ADGRB3O60242 1522 aa11.55□□□□□ -0.56
RNF213-219ENST00000574909 ANKRD30AQ9BXX3 1397 aa11.55□□□□□ -0.56
RNF213-219ENST00000574909 PLEKHG1Q9ULL1 1385 aa11.55□□□□□ -0.56
RNF213-219ENST00000574909 ABCC5O15440 1437 aa11.55□□□□□ -0.56
RNF213-219ENST00000574909 NOS1P29475 1434 aa11.55□□□□□ -0.56
RNF213-219ENST00000574909 PPP1R15AO75807 674 aaPredicted RBP11.55□□□□□ -0.56
RNF213-219ENST00000574909 TBX22Q9Y458 520 aa11.55□□□□□ -0.56
RNF213-219ENST00000574909 ATF3P18847 181 aa11.54□□□□□ -0.56
RNF213-219ENST00000574909 C14orf37Q86TY3 774 aa11.54□□□□□ -0.56
RNF213-219ENST00000574909 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.54□□□□□ -0.56
RNF213-219ENST00000574909 C19orf44Q9H6X5 657 aa11.54□□□□□ -0.56
RNF213-219ENST00000574909 RPRD2Q5VT52 1461 aaKnown RBP11.53□□□□□ -0.56
RNF213-219ENST00000574909 CDK12Q9NYV4 1490 aaPredicted RBP11.53□□□□□ -0.56
RNF213-219ENST00000574909 TRIM52Q96A61 297 aa11.53□□□□□ -0.56
RNF213-219ENST00000574909 PIK3R4Q99570 1358 aa11.53□□□□□ -0.56
RNF213-219ENST00000574909 FOXD1Q16676 465 aa11.52□□□□□ -0.57
RNF213-219ENST00000574909 KANK4Q5T7N3 995 aaPredicted RBP11.52□□□□□ -0.57
RNF213-219ENST00000574909 COL16A1Q07092 1604 aaPredicted RBP11.52□□□□□ -0.57
RNF213-219ENST00000574909 SETD1AO15047 1707 aaKnown RBP11.52□□□□□ -0.57
RNF213-219ENST00000574909 DAPK1P53355 1430 aa11.52□□□□□ -0.57
RNF213-219ENST00000574909 ZFYVE9O95405 1425 aa11.51□□□□□ -0.57
RNF213-219ENST00000574909 LRP6O75581 1613 aa11.5□□□□□ -0.57
RNF213-219ENST00000574909 AHDC1Q5TGY3 1603 aaPredicted RBP11.5□□□□□ -0.57
RNF213-219ENST00000574909 SRCAPQ6ZRS2 3230 aa11.5□□□□□ -0.57
RNF213-219ENST00000574909 APLP2Q06481 763 aa11.5□□□□□ -0.57
RNF213-219ENST00000574909 CROCC2H7BZ55 1655 aa11.49□□□□□ -0.57
RNF213-219ENST00000574909 RIMS2Q9UQ26 1411 aa11.49□□□□□ -0.57
RNF213-219ENST00000574909 PTPN23Q9H3S7 1636 aa11.48□□□□□ -0.57
RNF213-219ENST00000574909 SHPRHQ149N8 1683 aa11.48□□□□□ -0.57
RNF213-219ENST00000574909 CHD2O14647 1828 aaKnown RBP11.48□□□□□ -0.57
RNF213-219ENST00000574909 DIP2AQ14689 1571 aa11.47□□□□□ -0.57
RNF213-219ENST00000574909 DCCP43146 1447 aa11.46□□□□□ -0.57
RNF213-219ENST00000574909 RBM6P78332 1123 aaKnown RBP11.46□□□□□ -0.57
RNF213-219ENST00000574909 BRINP3Q76B58 766 aa11.46□□□□□ -0.57
RNF213-219ENST00000574909 LRRC59Q96AG4 307 aaKnown RBP11.46□□□□□ -0.57
RNF213-219ENST00000574909 CHIC2Q9UKJ5 165 aa11.46□□□□□ -0.57
RNF213-219ENST00000574909 AFF2P51816 1311 aa11.45□□□□□ -0.58
RNF213-219ENST00000574909 NUTM2BA6NNL0 878 aaPredicted RBP11.45□□□□□ -0.58
RNF213-219ENST00000574909 NUTM2EB1AL46 878 aaPredicted RBP11.45□□□□□ -0.58
RNF213-219ENST00000574909 NUTM2AQ8IVF1 878 aaPredicted RBP11.45□□□□□ -0.58
RNF213-219ENST00000574909 SETD5Q9C0A6 1442 aa11.44□□□□□ -0.58
RNF213-219ENST00000574909 NGLY1Q96IV0 654 aa11.44□□□□□ -0.58
RNF213-219ENST00000574909 ADGRL2O95490 1459 aa11.44□□□□□ -0.58
RNF213-219ENST00000574909 ADAMTS13Q76LX8 1427 aa11.43□□□□□ -0.58
RNF213-219ENST00000574909 ANKRD50Q9ULJ7 1429 aa11.43□□□□□ -0.58
RNF213-219ENST00000574909 CHGAP10645 457 aaKnown RBP11.43□□□□□ -0.58
RNF213-219ENST00000574909 QTRT2Q9H974 415 aaKnown RBP11.43□□□□□ -0.58
RNF213-219ENST00000574909 AMOTL2Q9Y2J4 779 aa11.43□□□□□ -0.58
RNF213-219ENST00000574909 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.43□□□□□ -0.58
RNF213-219ENST00000574909 TMEM131LA2VDJ0 1609 aa11.42□□□□□ -0.58
RNF213-219ENST00000574909 TRPM2O94759 1503 aa11.42□□□□□ -0.58
RNF213-219ENST00000574909 ATAD2Q6PL18 1390 aa11.41□□□□□ -0.58
RNF213-219ENST00000574909 NUTM2DQ5VT03 806 aaPredicted RBP11.4□□□□□ -0.58
RNF213-219ENST00000574909 C8orf37Q96NL8 207 aa11.4□□□□□ -0.58
RNF213-219ENST00000574909 ASXL1Q8IXJ9 1541 aa11.4□□□□□ -0.59
RNF213-219ENST00000574909 RGS12O14924 1447 aa11.39□□□□□ -0.59
RNF213-219ENST00000574909 ZRANB1Q9UGI0 708 aa11.39□□□□□ -0.59
RNF213-219ENST00000574909 GCC2Q8IWJ2 1684 aa11.39□□□□□ -0.59
RNF213-219ENST00000574909 CCDC125Q86Z20 511 aa11.38□□□□□ -0.59
RNF213-219ENST00000574909 MST1RQ04912 1400 aa11.37□□□□□ -0.59
RNF213-219ENST00000574909 TRPC5Q9UL62 973 aaPredicted RBP11.36□□□□□ -0.59
RNF213-219ENST00000574909 PNPLA6Q8IY17 1366 aa11.36□□□□□ -0.59
RNF213-219ENST00000574909 PTPRUQ92729 1446 aa11.35□□□□□ -0.59
RNF213-219ENST00000574909 FAM50AQ14320 339 aaKnown RBP11.35□□□□□ -0.59
RNF213-219ENST00000574909 NHSL1Q5SYE7 1610 aa11.35□□□□□ -0.59
RNF213-219ENST00000574909 USP21Q9UK80 565 aa11.34□□□□□ -0.59
RNF213-219ENST00000574909 MYO5BQ9ULV0 1848 aa11.34□□□□□ -0.59
RNF213-219ENST00000574909 ADGRL3Q9HAR2 1447 aa11.34□□□□□ -0.59
RNF213-219ENST00000574909 UNC13BO14795 1591 aa11.33□□□□□ -0.6
RNF213-219ENST00000574909 ADAMTS2O95450 1211 aa11.33□□□□□ -0.6
RNF213-219ENST00000574909 MIER1Q8N108 512 aa11.33□□□□□ -0.6
RNF213-219ENST00000574909 FNBP4Q8N3X1 1017 aaPredicted RBP11.33□□□□□ -0.6
RNF213-219ENST00000574909 PTCH1Q13635 1447 aa11.33□□□□□ -0.6
RNF213-219ENST00000574909 SETBP1Q9Y6X0 1596 aa11.33□□□□□ -0.6
RNF213-219ENST00000574909 ROCK1Q13464 1354 aa11.32□□□□□ -0.6
RNF213-219ENST00000574909 XRN1Q8IZH2 1706 aaKnown RBP11.32□□□□□ -0.6
RNF213-219ENST00000574909 ZNF326Q5BKZ1 582 aaKnown RBP11.31□□□□□ -0.6
RNF213-219ENST00000574909 SOS2Q07890 1332 aaPredicted RBP11.31□□□□□ -0.6
RNF213-219ENST00000574909 NUP155O75694 1391 aa11.3□□□□□ -0.6
RNF213-219ENST00000574909 E9PCH4 1651 aa11.3□□□□□ -0.6
RNF213-219ENST00000574909 METP08581 1390 aa11.29□□□□□ -0.6
RNF213-219ENST00000574909 RRBP1Q9P2E9 1410 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms