RNA–Protein interactions for RNA: ENST00000573876.1

NPLOC4-214, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4 BASIC

Gene NPLOC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-214ENST00000573876 NEUROD1Q13562 356 aa18.75■□□□□ 0.59
NPLOC4-214ENST00000573876 MYO5BQ9ULV0 1848 aa18.74■□□□□ 0.59
NPLOC4-214ENST00000573876 SCAF11Q99590 1463 aaKnown RBP18.74■□□□□ 0.59
NPLOC4-214ENST00000573876 RPGRIP1LQ68CZ1 1315 aa18.74■□□□□ 0.59
NPLOC4-214ENST00000573876 LTKP29376 864 aa18.73■□□□□ 0.59
NPLOC4-214ENST00000573876 RGL3Q3MIN7 710 aa18.73■□□□□ 0.59
NPLOC4-214ENST00000573876 BCANQ96GW7 911 aa18.72■□□□□ 0.59
NPLOC4-214ENST00000573876 STRCQ7RTU9 1775 aa18.71■□□□□ 0.59
NPLOC4-214ENST00000573876 POLR1AO95602 1720 aaPredicted RBP18.71■□□□□ 0.59
NPLOC4-214ENST00000573876 NPHP4O75161 1426 aaPredicted RBP18.7■□□□□ 0.58
NPLOC4-214ENST00000573876 ZFYVE9O95405 1425 aa18.7■□□□□ 0.58
NPLOC4-214ENST00000573876 SPATA31E1Q6ZUB1 1445 aa18.7■□□□□ 0.58
NPLOC4-214ENST00000573876 NUTM2DQ5VT03 806 aaPredicted RBP18.69■□□□□ 0.58
NPLOC4-214ENST00000573876 CLSPNQ9HAW4 1339 aa18.69■□□□□ 0.58
NPLOC4-214ENST00000573876 VGFO15240 615 aaPredicted RBP18.68■□□□□ 0.58
NPLOC4-214ENST00000573876 MED14O60244 1454 aa18.68■□□□□ 0.58
NPLOC4-214ENST00000573876 NEURL4Q96JN8 1562 aa18.68■□□□□ 0.58
NPLOC4-214ENST00000573876 PLEKHG1Q9ULL1 1385 aa18.66■□□□□ 0.58
NPLOC4-214ENST00000573876 NEXMIFQ5QGS0 1516 aa18.64■□□□□ 0.58
NPLOC4-214ENST00000573876 IQGAP1P46940 1657 aa18.63■□□□□ 0.57
NPLOC4-214ENST00000573876 SENP3Q9H4L4 574 aaPredicted RBP18.63■□□□□ 0.57
NPLOC4-214ENST00000573876 STAC3Q96MF2 364 aa18.62■□□□□ 0.57
NPLOC4-214ENST00000573876 SLC26A8Q96RN1 970 aa18.61■□□□□ 0.57
NPLOC4-214ENST00000573876 DCAF11Q8TEB1 546 aa18.6■□□□□ 0.57
NPLOC4-214ENST00000573876 PPLO60437 1756 aa18.6■□□□□ 0.57
NPLOC4-214ENST00000573876 KDM2AQ9Y2K7 1162 aa18.59■□□□□ 0.57
NPLOC4-214ENST00000573876 TBX22Q9Y458 520 aa18.58■□□□□ 0.56
NPLOC4-214ENST00000573876 ADGRF5Q8IZF2 1346 aa18.57■□□□□ 0.56
NPLOC4-214ENST00000573876 L3MBTL2Q969R5 705 aa18.57■□□□□ 0.56
NPLOC4-214ENST00000573876 TONSLQ96HA7 1378 aa18.55■□□□□ 0.56
NPLOC4-214ENST00000573876 IFT172Q9UG01 1749 aa18.55■□□□□ 0.56
NPLOC4-214ENST00000573876 MYOM2P54296 1465 aa18.55■□□□□ 0.56
NPLOC4-214ENST00000573876 ADAMTS13Q76LX8 1427 aa18.54■□□□□ 0.56
NPLOC4-214ENST00000573876 DIP2AQ14689 1571 aa18.54■□□□□ 0.56
NPLOC4-214ENST00000573876 SETBP1Q9Y6X0 1596 aa18.54■□□□□ 0.56
NPLOC4-214ENST00000573876 ZNF335Q9H4Z2 1342 aaPredicted RBP18.52■□□□□ 0.56
NPLOC4-214ENST00000573876 TIMELESSQ9UNS1 1208 aa18.52■□□□□ 0.56
NPLOC4-214ENST00000573876 KCNA6P17658 529 aa18.51■□□□□ 0.55
NPLOC4-214ENST00000573876 PIK3R4Q99570 1358 aa18.51■□□□□ 0.55
NPLOC4-214ENST00000573876 PIK3C2GO75747 1445 aa18.5■□□□□ 0.55
NPLOC4-214ENST00000573876 NRXN1Q9ULB1 1477 aa18.49■□□□□ 0.55
NPLOC4-214ENST00000573876 NRXN3Q9Y4C0 1643 aa18.49■□□□□ 0.55
NPLOC4-214ENST00000573876 C14orf93Q9H972 538 aaKnown RBP18.48■□□□□ 0.55
NPLOC4-214ENST00000573876 ALKQ9UM73 1620 aa18.48■□□□□ 0.55
NPLOC4-214ENST00000573876 CFAP70Q5T0N1 1121 aa18.46■□□□□ 0.55
NPLOC4-214ENST00000573876 AMOTL2Q9Y2J4 779 aa18.46■□□□□ 0.55
NPLOC4-214ENST00000573876 METP08581 1390 aa18.45■□□□□ 0.54
NPLOC4-214ENST00000573876 CPS1P31327 1500 aa18.45■□□□□ 0.54
NPLOC4-214ENST00000573876 PRAG1Q86YV5 1406 aa18.43■□□□□ 0.54
NPLOC4-214ENST00000573876 LAMC1P11047 1609 aa18.43■□□□□ 0.54
NPLOC4-214ENST00000573876 PROSER2Q86WR7 435 aaPredicted RBP18.43■□□□□ 0.54
NPLOC4-214ENST00000573876 CHD2O14647 1828 aaKnown RBP18.43■□□□□ 0.54
NPLOC4-214ENST00000573876 LTBP4Q8N2S1 1624 aa18.42■□□□□ 0.54
NPLOC4-214ENST00000573876 TMEM132EQ6IEE7 984 aa18.42■□□□□ 0.54
NPLOC4-214ENST00000573876 NKTRP30414 1462 aaKnown RBP18.41■□□□□ 0.54
NPLOC4-214ENST00000573876 NWD1Q149M9 1564 aa18.41■□□□□ 0.54
NPLOC4-214ENST00000573876 PTPRUQ92729 1446 aa18.4■□□□□ 0.54
NPLOC4-214ENST00000573876 ZEB1P37275 1124 aaPredicted RBP18.4■□□□□ 0.54
NPLOC4-214ENST00000573876 NBPF8Q3BBV2 869 aa18.4■□□□□ 0.54
NPLOC4-214ENST00000573876 ILDR1Q86SU0 546 aaPredicted RBP18.4■□□□□ 0.54
NPLOC4-214ENST00000573876 CERKQ8TCT0 537 aa18.4■□□□□ 0.54
NPLOC4-214ENST00000573876 STK26Q9P289 416 aa18.4■□□□□ 0.54
NPLOC4-214ENST00000573876 SETD1AO15047 1707 aaKnown RBP18.4■□□□□ 0.54
NPLOC4-214ENST00000573876 LRPPRCP42704 1394 aaKnown RBP18.39■□□□□ 0.53
NPLOC4-214ENST00000573876 STRCP1A6NGW2 1772 aa18.38■□□□□ 0.53
NPLOC4-214ENST00000573876 ABCC11Q96J66 1382 aa18.37■□□□□ 0.53
NPLOC4-214ENST00000573876 YTHDC2Q9H6S0 1430 aaKnown RBP18.37■□□□□ 0.53
NPLOC4-214ENST00000573876 LRRC7Q96NW7 1537 aa18.37■□□□□ 0.53
NPLOC4-214ENST00000573876 TMEM94Q12767 1356 aa18.36■□□□□ 0.53
NPLOC4-214ENST00000573876 C14orf37Q86TY3 774 aa18.36■□□□□ 0.53
NPLOC4-214ENST00000573876 KIAA1210Q9ULL0 1709 aa18.36■□□□□ 0.53
NPLOC4-214ENST00000573876 XRN1Q8IZH2 1706 aaKnown RBP18.35■□□□□ 0.53
NPLOC4-214ENST00000573876 ASXL1Q8IXJ9 1541 aa18.35■□□□□ 0.53
NPLOC4-214ENST00000573876 PTCH1Q13635 1447 aa18.34■□□□□ 0.53
NPLOC4-214ENST00000573876 NBPF1Q3BBV0 1214 aa18.34■□□□□ 0.53
NPLOC4-214ENST00000573876 IQSEC2Q5JU85 1478 aa18.33■□□□□ 0.53
NPLOC4-214ENST00000573876 ROCK2O75116 1388 aaKnown RBP18.33■□□□□ 0.53
NPLOC4-214ENST00000573876 TRAK1Q9UPV9 953 aa18.33■□□□□ 0.52
NPLOC4-214ENST00000573876 ADGRB1O14514 1584 aa18.33■□□□□ 0.52
NPLOC4-214ENST00000573876 TECPR2O15040 1411 aa18.32■□□□□ 0.52
NPLOC4-214ENST00000573876 NCOA3Q9Y6Q9 1424 aa18.32■□□□□ 0.52
NPLOC4-214ENST00000573876 SIRT1Q96EB6 747 aa18.32■□□□□ 0.52
NPLOC4-214ENST00000573876 RBM33Q96EV2 1170 aaKnown RBP18.32■□□□□ 0.52
NPLOC4-214ENST00000573876 ROBO2Q9HCK4 1378 aa18.31■□□□□ 0.52
NPLOC4-214ENST00000573876 POGKQ9P215 609 aa18.31■□□□□ 0.52
NPLOC4-214ENST00000573876 MSH6P52701 1360 aa18.3■□□□□ 0.52
NPLOC4-214ENST00000573876 TRPM1Q7Z4N2 1603 aa18.3■□□□□ 0.52
NPLOC4-214ENST00000573876 KNDC1Q76NI1 1749 aa18.29■□□□□ 0.52
NPLOC4-214ENST00000573876 CARD11Q9BXL7 1154 aa18.29■□□□□ 0.52
NPLOC4-214ENST00000573876 FAM135BQ49AJ0 1406 aa18.29■□□□□ 0.52
NPLOC4-214ENST00000573876 RALGAPBQ86X10 1494 aa18.28■□□□□ 0.52
NPLOC4-214ENST00000573876 WAPLQ7Z5K2 1190 aa18.28■□□□□ 0.52
NPLOC4-214ENST00000573876 PRAM1Q96QH2 718 aa18.28■□□□□ 0.52
NPLOC4-214ENST00000573876 C19orf44Q9H6X5 657 aa18.28■□□□□ 0.52
NPLOC4-214ENST00000573876 DLC1Q96QB1 1528 aa18.28■□□□□ 0.52
NPLOC4-214ENST00000573876 TOM1O60784 492 aa18.27■□□□□ 0.52
NPLOC4-214ENST00000573876 UBAP1LF5GYI3 381 aa18.26■□□□□ 0.51
NPLOC4-214ENST00000573876 ATF3P18847 181 aa18.26■□□□□ 0.51
NPLOC4-214ENST00000573876 GPRASP1Q5JY77 1395 aa18.26■□□□□ 0.51
NPLOC4-214ENST00000573876 SAFB2Q14151 953 aaKnown RBP eCLIP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms