RNA–Protein interactions for RNA: ENST00000573270.1

LINC01996-201, Transcript of long intergenic non-protein coding RNA 1996, humanhuman

TSL 1 (best) BASIC

Gene LINC01996, Length 1,273 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01996-201ENST00000573270 ZFYVE9O95405 1425 aa19.6■□□□□ 0.73
LINC01996-201ENST00000573270 IQGAP1P46940 1657 aa19.6■□□□□ 0.73
LINC01996-201ENST00000573270 STAG3Q9UJ98 1225 aa19.6■□□□□ 0.73
LINC01996-201ENST00000573270 RIMS2Q9UQ26 1411 aa19.59■□□□□ 0.73
LINC01996-201ENST00000573270 RGL3Q3MIN7 710 aa19.57■□□□□ 0.72
LINC01996-201ENST00000573270 ZNF326Q5BKZ1 582 aaKnown RBP19.57■□□□□ 0.72
LINC01996-201ENST00000573270 TMEM2Q9UHN6 1383 aa19.57■□□□□ 0.72
LINC01996-201ENST00000573270 NRXN3Q9Y4C0 1643 aa19.56■□□□□ 0.72
LINC01996-201ENST00000573270 SCAF11Q99590 1463 aaKnown RBP19.54■□□□□ 0.72
LINC01996-201ENST00000573270 SETD1AO15047 1707 aaKnown RBP19.54■□□□□ 0.72
LINC01996-201ENST00000573270 LAMC1P11047 1609 aa19.53■□□□□ 0.72
LINC01996-201ENST00000573270 NRXN1Q9ULB1 1477 aa19.53■□□□□ 0.72
LINC01996-201ENST00000573270 TRPM1Q7Z4N2 1603 aa19.52■□□□□ 0.72
LINC01996-201ENST00000573270 STRCQ7RTU9 1775 aa19.52■□□□□ 0.71
LINC01996-201ENST00000573270 L3MBTL2Q969R5 705 aa19.51■□□□□ 0.71
LINC01996-201ENST00000573270 SETBP1Q9Y6X0 1596 aa19.51■□□□□ 0.71
LINC01996-201ENST00000573270 NUTM2DQ5VT03 806 aaPredicted RBP19.5■□□□□ 0.71
LINC01996-201ENST00000573270 PRAG1Q86YV5 1406 aa19.5■□□□□ 0.71
LINC01996-201ENST00000573270 THEMISQ8N1K5 641 aaPredicted RBP19.49■□□□□ 0.71
LINC01996-201ENST00000573270 PIK3C2GO75747 1445 aa19.49■□□□□ 0.71
LINC01996-201ENST00000573270 RPGRIP1LQ68CZ1 1315 aa19.49■□□□□ 0.71
LINC01996-201ENST00000573270 KIAA1210Q9ULL0 1709 aa19.48■□□□□ 0.71
LINC01996-201ENST00000573270 HSPA2P54652 639 aa19.48■□□□□ 0.71
LINC01996-201ENST00000573270 DCAF11Q8TEB1 546 aa19.48■□□□□ 0.71
LINC01996-201ENST00000573270 ASXL1Q8IXJ9 1541 aa19.46■□□□□ 0.71
LINC01996-201ENST00000573270 DIP2AQ14689 1571 aa19.46■□□□□ 0.71
LINC01996-201ENST00000573270 PPP1R15AO75807 674 aaPredicted RBP19.46■□□□□ 0.71
LINC01996-201ENST00000573270 ADGRF5Q8IZF2 1346 aa19.46■□□□□ 0.71
LINC01996-201ENST00000573270 KDM2AQ9Y2K7 1162 aa19.45■□□□□ 0.7
LINC01996-201ENST00000573270 PLEKHG1Q9ULL1 1385 aa19.44■□□□□ 0.7
LINC01996-201ENST00000573270 ALKQ9UM73 1620 aa19.44■□□□□ 0.7
LINC01996-201ENST00000573270 RALGAPBQ86X10 1494 aa19.44■□□□□ 0.7
LINC01996-201ENST00000573270 LTKP29376 864 aa19.44■□□□□ 0.7
LINC01996-201ENST00000573270 MED14O60244 1454 aa19.43■□□□□ 0.7
LINC01996-201ENST00000573270 NPHP4O75161 1426 aaPredicted RBP19.42■□□□□ 0.7
LINC01996-201ENST00000573270 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.42■□□□□ 0.7
LINC01996-201ENST00000573270 EID1Q9Y6B2 187 aa19.42■□□□□ 0.7
LINC01996-201ENST00000573270 TXNDC2Q86VQ3 553 aa19.41■□□□□ 0.7
LINC01996-201ENST00000573270 TIMELESSQ9UNS1 1208 aa19.41■□□□□ 0.7
LINC01996-201ENST00000573270 NCKAP5LQ9HCH0 1330 aa19.4■□□□□ 0.7
LINC01996-201ENST00000573270 ADAMTS13Q76LX8 1427 aa19.4■□□□□ 0.7
LINC01996-201ENST00000573270 ADGRB1O14514 1584 aa19.39■□□□□ 0.69
LINC01996-201ENST00000573270 VGFO15240 615 aaPredicted RBP19.38■□□□□ 0.69
LINC01996-201ENST00000573270 NBPF8Q3BBV2 869 aa19.38■□□□□ 0.69
LINC01996-201ENST00000573270 ANKLE2Q86XL3 938 aa19.38■□□□□ 0.69
LINC01996-201ENST00000573270 KNDC1Q76NI1 1749 aa19.37■□□□□ 0.69
LINC01996-201ENST00000573270 XRN1Q8IZH2 1706 aaKnown RBP19.36■□□□□ 0.69
LINC01996-201ENST00000573270 ARHGEF28Q8N1W1 1705 aaKnown RBP19.35■□□□□ 0.69
LINC01996-201ENST00000573270 HDGFP51858 240 aaKnown RBP19.35■□□□□ 0.69
LINC01996-201ENST00000573270 STAC3Q96MF2 364 aa19.34■□□□□ 0.69
LINC01996-201ENST00000573270 NWD1Q149M9 1564 aa19.34■□□□□ 0.69
LINC01996-201ENST00000573270 ZEB1P37275 1124 aaPredicted RBP19.33■□□□□ 0.68
LINC01996-201ENST00000573270 BCANQ96GW7 911 aa19.33■□□□□ 0.68
LINC01996-201ENST00000573270 CFAP70Q5T0N1 1121 aa19.32■□□□□ 0.68
LINC01996-201ENST00000573270 CHD2O14647 1828 aaKnown RBP19.32■□□□□ 0.68
LINC01996-201ENST00000573270 STRCP1A6NGW2 1772 aa19.32■□□□□ 0.68
LINC01996-201ENST00000573270 ROCK2O75116 1388 aaKnown RBP19.32■□□□□ 0.68
LINC01996-201ENST00000573270 CPS1P31327 1500 aa19.3■□□□□ 0.68
LINC01996-201ENST00000573270 SLC26A8Q96RN1 970 aa19.3■□□□□ 0.68
LINC01996-201ENST00000573270 METP08581 1390 aa19.3■□□□□ 0.68
LINC01996-201ENST00000573270 GPRASP1Q5JY77 1395 aa19.29■□□□□ 0.68
LINC01996-201ENST00000573270 PTPRUQ92729 1446 aa19.27■□□□□ 0.68
LINC01996-201ENST00000573270 C14orf93Q9H972 538 aaKnown RBP19.27■□□□□ 0.68
LINC01996-201ENST00000573270 QRICH2Q9H0J4 1663 aa19.27■□□□□ 0.67
LINC01996-201ENST00000573270 NBPF1Q3BBV0 1214 aa19.26■□□□□ 0.67
LINC01996-201ENST00000573270 YTHDC2Q9H6S0 1430 aaKnown RBP19.25■□□□□ 0.67
LINC01996-201ENST00000573270 TMEM132EQ6IEE7 984 aa19.24■□□□□ 0.67
LINC01996-201ENST00000573270 DMRT2Q9Y5R5 561 aa19.24■□□□□ 0.67
LINC01996-201ENST00000573270 DLC1Q96QB1 1528 aa19.24■□□□□ 0.67
LINC01996-201ENST00000573270 LRPPRCP42704 1394 aaKnown RBP19.22■□□□□ 0.67
LINC01996-201ENST00000573270 PIK3R4Q99570 1358 aa19.22■□□□□ 0.67
LINC01996-201ENST00000573270 TBX22Q9Y458 520 aa19.22■□□□□ 0.67
LINC01996-201ENST00000573270 TECPR2O15040 1411 aa19.22■□□□□ 0.67
LINC01996-201ENST00000573270 NKTRP30414 1462 aaKnown RBP19.22■□□□□ 0.67
LINC01996-201ENST00000573270 PTCH1Q13635 1447 aa19.21■□□□□ 0.67
LINC01996-201ENST00000573270 NALCNQ8IZF0 1738 aa19.2■□□□□ 0.66
LINC01996-201ENST00000573270 CARD11Q9BXL7 1154 aa19.2■□□□□ 0.66
LINC01996-201ENST00000573270 USP47Q96K76 1375 aa19.19■□□□□ 0.66
LINC01996-201ENST00000573270 XIRP1Q702N8 1843 aaKnown RBP19.18■□□□□ 0.66
LINC01996-201ENST00000573270 STK26Q9P289 416 aa19.17■□□□□ 0.66
LINC01996-201ENST00000573270 EIF3AQ14152 1382 aaKnown RBP19.16■□□□□ 0.66
LINC01996-201ENST00000573270 ROBO2Q9HCK4 1378 aa19.16■□□□□ 0.66
LINC01996-201ENST00000573270 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.15■□□□□ 0.66
LINC01996-201ENST00000573270 TRAK1Q9UPV9 953 aa19.15■□□□□ 0.66
LINC01996-201ENST00000573270 ZNF335Q9H4Z2 1342 aaPredicted RBP19.15■□□□□ 0.66
LINC01996-201ENST00000573270 ABCC11Q96J66 1382 aa19.15■□□□□ 0.66
LINC01996-201ENST00000573270 ADGRB2O60241 1585 aa19.15■□□□□ 0.66
LINC01996-201ENST00000573270 PLEKHH1Q9ULM0 1364 aa19.14■□□□□ 0.65
LINC01996-201ENST00000573270 MSH5O43196 834 aa19.13■□□□□ 0.65
LINC01996-201ENST00000573270 KCNA6P17658 529 aa19.13■□□□□ 0.65
LINC01996-201ENST00000573270 AMOTL2Q9Y2J4 779 aa19.13■□□□□ 0.65
LINC01996-201ENST00000573270 LTBP4Q8N2S1 1624 aa19.13■□□□□ 0.65
LINC01996-201ENST00000573270 FAM135BQ49AJ0 1406 aa19.12■□□□□ 0.65
LINC01996-201ENST00000573270 TULP4Q9NRJ4 1543 aa19.1■□□□□ 0.65
LINC01996-201ENST00000573270 LRRC7Q96NW7 1537 aa19.1■□□□□ 0.65
LINC01996-201ENST00000573270 CDC42BPGQ6DT37 1551 aa19.09■□□□□ 0.65
LINC01996-201ENST00000573270 HSPA5P11021 654 aaKnown RBP19.08■□□□□ 0.64
LINC01996-201ENST00000573270 PRAM1Q96QH2 718 aa19.08■□□□□ 0.64
LINC01996-201ENST00000573270 CENPJQ9HC77 1338 aaPredicted RBP19.07■□□□□ 0.64
LINC01996-201ENST00000573270 FMN2Q9NZ56 1722 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms