RNA–Protein interactions for RNA: ENST00000572857.5

CHRNB1-204, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 4

Gene CHRNB1, Length 539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-204ENST00000572857 E9PCH4 1651 aa31.47■■■□□ 2.63
CHRNB1-204ENST00000572857 RIMS2Q9UQ26 1411 aa31.45■■■□□ 2.63
CHRNB1-204ENST00000572857 KCNA6P17658 529 aa31.44■■■□□ 2.62
CHRNB1-204ENST00000572857 NUTM2DQ5VT03 806 aaPredicted RBP31.43■■■□□ 2.62
CHRNB1-204ENST00000572857 ZFYVE9O95405 1425 aa31.42■■■□□ 2.62
CHRNB1-204ENST00000572857 NAIPQ13075 1403 aa31.41■■■□□ 2.62
CHRNB1-204ENST00000572857 TMEM131LA2VDJ0 1609 aa31.4■■■□□ 2.62
CHRNB1-204ENST00000572857 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.4■■■□□ 2.62
CHRNB1-204ENST00000572857 PROSER2Q86WR7 435 aaPredicted RBP31.39■■■□□ 2.62
CHRNB1-204ENST00000572857 PLEKHG1Q9ULL1 1385 aa31.38■■■□□ 2.61
CHRNB1-204ENST00000572857 TRIM52Q96A61 297 aa31.37■■■□□ 2.61
CHRNB1-204ENST00000572857 RBM33Q96EV2 1170 aaKnown RBP31.37■■■□□ 2.61
CHRNB1-204ENST00000572857 ALKQ9UM73 1620 aa31.36■■■□□ 2.61
CHRNB1-204ENST00000572857 TMEM94Q12767 1356 aa31.35■■■□□ 2.61
CHRNB1-204ENST00000572857 MYO5BQ9ULV0 1848 aa31.34■■■□□ 2.61
CHRNB1-204ENST00000572857 TBX22Q9Y458 520 aa31.3■■■□□ 2.6
CHRNB1-204ENST00000572857 HFM1A2PYH4 1435 aa31.3■■■□□ 2.6
CHRNB1-204ENST00000572857 ZNF326Q5BKZ1 582 aaKnown RBP31.28■■■□□ 2.6
CHRNB1-204ENST00000572857 ILDR2Q71H61 639 aa31.28■■■□□ 2.6
CHRNB1-204ENST00000572857 SLC4A1APQ9BWU0 796 aaKnown RBP31.23■■■□□ 2.59
CHRNB1-204ENST00000572857 NKTRP30414 1462 aaKnown RBP31.22■■■□□ 2.59
CHRNB1-204ENST00000572857 ADAMTS13Q76LX8 1427 aa31.22■■■□□ 2.59
CHRNB1-204ENST00000572857 XIRP1Q702N8 1843 aaKnown RBP31.21■■■□□ 2.59
CHRNB1-204ENST00000572857 SPHKAPQ2M3C7 1700 aa31.2■■■□□ 2.58
CHRNB1-204ENST00000572857 NWD1Q149M9 1564 aa31.19■■■□□ 2.58
CHRNB1-204ENST00000572857 MSH6P52701 1360 aa31.17■■■□□ 2.58
CHRNB1-204ENST00000572857 C14orf37Q86TY3 774 aa31.15■■■□□ 2.58
CHRNB1-204ENST00000572857 TRPM2O94759 1503 aa31.13■■■□□ 2.57
CHRNB1-204ENST00000572857 AMOTL2Q9Y2J4 779 aa31.12■■■□□ 2.57
CHRNB1-204ENST00000572857 PIK3R4Q99570 1358 aa31.12■■■□□ 2.57
CHRNB1-204ENST00000572857 FAM135BQ49AJ0 1406 aa31.12■■■□□ 2.57
CHRNB1-204ENST00000572857 CLTCL1P53675 1640 aa31.12■■■□□ 2.57
CHRNB1-204ENST00000572857 CHD2O14647 1828 aaKnown RBP31.1■■■□□ 2.57
CHRNB1-204ENST00000572857 FOXD1Q16676 465 aa31.1■■■□□ 2.57
CHRNB1-204ENST00000572857 DIP2AQ14689 1571 aa31.09■■■□□ 2.57
CHRNB1-204ENST00000572857 SLAIN2Q9P270 581 aa31.09■■■□□ 2.57
CHRNB1-204ENST00000572857 PTPRUQ92729 1446 aa31.06■■■□□ 2.56
CHRNB1-204ENST00000572857 MED1Q15648 1581 aaPredicted RBP31.05■■■□□ 2.56
CHRNB1-204ENST00000572857 NCOA3Q9Y6Q9 1424 aa31.02■■■□□ 2.56
CHRNB1-204ENST00000572857 MPHOSPH9Q99550 1183 aa31.02■■■□□ 2.56
CHRNB1-204ENST00000572857 PHF23Q9BUL5 403 aaPredicted RBP31.02■■■□□ 2.56
CHRNB1-204ENST00000572857 C19orf44Q9H6X5 657 aa31.02■■■□□ 2.56
CHRNB1-204ENST00000572857 METP08581 1390 aa31.01■■■□□ 2.55
CHRNB1-204ENST00000572857 SETBP1Q9Y6X0 1596 aa31■■■□□ 2.55
CHRNB1-204ENST00000572857 NEXMIFQ5QGS0 1516 aa31■■■□□ 2.55
CHRNB1-204ENST00000572857 VGFO15240 615 aaPredicted RBP31■■■□□ 2.55
CHRNB1-204ENST00000572857 SOCS7O14512 581 aa30.99■■■□□ 2.55
CHRNB1-204ENST00000572857 ATF3P18847 181 aa30.99■■■□□ 2.55
CHRNB1-204ENST00000572857 NRXN3Q9Y4C0 1643 aa30.98■■■□□ 2.55
CHRNB1-204ENST00000572857 CADPS2Q86UW7 1296 aa30.97■■■□□ 2.55
CHRNB1-204ENST00000572857 ROBO1Q9Y6N7 1651 aa30.97■■■□□ 2.55
CHRNB1-204ENST00000572857 KIF1BO60333 1816 aa30.96■■■□□ 2.55
CHRNB1-204ENST00000572857 RPGRIP1LQ68CZ1 1315 aa30.96■■■□□ 2.55
CHRNB1-204ENST00000572857 SETD5Q9C0A6 1442 aa30.92■■■□□ 2.54
CHRNB1-204ENST00000572857 RGL3Q3MIN7 710 aa30.91■■■□□ 2.54
CHRNB1-204ENST00000572857 CCDC144AA2RUR9 1427 aa30.9■■■□□ 2.54
CHRNB1-204ENST00000572857 ACIN1Q9UKV3 1341 aaKnown RBP30.86■■■□□ 2.53
CHRNB1-204ENST00000572857 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.86■■■□□ 2.53
CHRNB1-204ENST00000572857 XRN1Q8IZH2 1706 aaKnown RBP30.85■■■□□ 2.53
CHRNB1-204ENST00000572857 RAB3GAP2Q9H2M9 1393 aa30.81■■■□□ 2.52
CHRNB1-204ENST00000572857 ADGRF5Q8IZF2 1346 aa30.8■■■□□ 2.52
CHRNB1-204ENST00000572857 BRINP3Q76B58 766 aa30.8■■■□□ 2.52
CHRNB1-204ENST00000572857 DCCP43146 1447 aa30.79■■■□□ 2.52
CHRNB1-204ENST00000572857 SPATA31E1Q6ZUB1 1445 aa30.78■■■□□ 2.52
CHRNB1-204ENST00000572857 PHLPP1O60346 1717 aa30.77■■■□□ 2.52
CHRNB1-204ENST00000572857 JCADQ9P266 1359 aa30.77■■■□□ 2.52
CHRNB1-204ENST00000572857 RGS17Q9UGC6 210 aaPredicted RBP30.76■■■□□ 2.51
CHRNB1-204ENST00000572857 ADGRL3Q9HAR2 1447 aa30.75■■■□□ 2.51
CHRNB1-204ENST00000572857 ROBO2Q9HCK4 1378 aa30.75■■■□□ 2.51
CHRNB1-204ENST00000572857 PPLO60437 1756 aa30.74■■■□□ 2.51
CHRNB1-204ENST00000572857 ANKRD30BQ9BXX2 1392 aa30.73■■■□□ 2.51
CHRNB1-204ENST00000572857 MST1RQ04912 1400 aa30.72■■■□□ 2.51
CHRNB1-204ENST00000572857 PTCH1Q13635 1447 aa30.71■■■□□ 2.51
CHRNB1-204ENST00000572857 STK26Q9P289 416 aa30.7■■■□□ 2.51
CHRNB1-204ENST00000572857 COL16A1Q07092 1604 aaPredicted RBP30.68■■■□□ 2.5
CHRNB1-204ENST00000572857 SETD1AO15047 1707 aaKnown RBP30.67■■■□□ 2.5
CHRNB1-204ENST00000572857 AHDC1Q5TGY3 1603 aaPredicted RBP30.66■■■□□ 2.5
CHRNB1-204ENST00000572857 TMEM132EQ6IEE7 984 aa30.66■■■□□ 2.5
CHRNB1-204ENST00000572857 ASXL1Q8IXJ9 1541 aa30.65■■■□□ 2.5
CHRNB1-204ENST00000572857 DDX17Q92841 729 aaKnown RBP30.65■■■□□ 2.5
CHRNB1-204ENST00000572857 SPATA31A6Q5VVP1 1343 aa30.63■■■□□ 2.49
CHRNB1-204ENST00000572857 NALCNQ8IZF0 1738 aa30.62■■■□□ 2.49
CHRNB1-204ENST00000572857 MEX3CQ5U5Q3 659 aaKnown RBP30.61■■■□□ 2.49
CHRNB1-204ENST00000572857 POTEAQ6S8J7 498 aa30.61■■■□□ 2.49
CHRNB1-204ENST00000572857 PRAG1Q86YV5 1406 aa30.61■■■□□ 2.49
CHRNB1-204ENST00000572857 WAPLQ7Z5K2 1190 aa30.6■■■□□ 2.49
CHRNB1-204ENST00000572857 C1orf167Q5SNV9 1468 aa30.59■■■□□ 2.49
CHRNB1-204ENST00000572857 PIK3C2GO75747 1445 aa30.58■■■□□ 2.49
CHRNB1-204ENST00000572857 NUTM2BA6NNL0 878 aaPredicted RBP30.58■■■□□ 2.49
CHRNB1-204ENST00000572857 NUTM2EB1AL46 878 aaPredicted RBP30.58■■■□□ 2.49
CHRNB1-204ENST00000572857 NUTM2AQ8IVF1 878 aaPredicted RBP30.58■■■□□ 2.49
CHRNB1-204ENST00000572857 ORAI2Q96SN7 254 aa30.58■■■□□ 2.49
CHRNB1-204ENST00000572857 LRPPRCP42704 1394 aaKnown RBP30.57■■■□□ 2.48
CHRNB1-204ENST00000572857 HRCP23327 699 aa30.57■■■□□ 2.48
CHRNB1-204ENST00000572857 LRRC59Q96AG4 307 aaKnown RBP30.57■■■□□ 2.48
CHRNB1-204ENST00000572857 C14orf93Q9H972 538 aaKnown RBP30.55■■■□□ 2.48
CHRNB1-204ENST00000572857 ABCC11Q96J66 1382 aa30.54■■■□□ 2.48
CHRNB1-204ENST00000572857 IFT172Q9UG01 1749 aa30.54■■■□□ 2.48
CHRNB1-204ENST00000572857 CFAP70Q5T0N1 1121 aa30.54■■■□□ 2.48
CHRNB1-204ENST00000572857 LRP6O75581 1613 aa30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms