RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, human

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPLOC4-208	ENST00000572351	BCAN	Q96GW7	911 aa		13.62	□□□□□ -0.23
NPLOC4-208	ENST00000572351	RIMS2	Q9UQ26	1411 aa		13.62	□□□□□ -0.23
NPLOC4-208	ENST00000572351	TMEM131L	A2VDJ0	1609 aa		13.61	□□□□□ -0.23
NPLOC4-208	ENST00000572351	CFAP65	Q6ZU64	1925 aa	Known RBP	13.6	□□□□□ -0.23
NPLOC4-208	ENST00000572351	ZNF142	P52746	1687 aa	Predicted RBP	13.6	□□□□□ -0.23
NPLOC4-208	ENST00000572351	VGF	O15240	615 aa	Predicted RBP	13.6	□□□□□ -0.23
NPLOC4-208	ENST00000572351	DCAF11	Q8TEB1	546 aa		13.6	□□□□□ -0.23
NPLOC4-208	ENST00000572351	KDM2A	Q9Y2K7	1162 aa		13.6	□□□□□ -0.23
NPLOC4-208	ENST00000572351	L3MBTL2	Q969R5	705 aa		13.59	□□□□□ -0.23
NPLOC4-208	ENST00000572351	NCKAP5L	Q9HCH0	1330 aa		13.59	□□□□□ -0.23
NPLOC4-208	ENST00000572351	LTK	P29376	864 aa		13.58	□□□□□ -0.24
NPLOC4-208	ENST00000572351	SCAF11	Q99590	1463 aa	Known RBP	13.58	□□□□□ -0.24
NPLOC4-208	ENST00000572351	ARHGAP23	Q9P227	1491 aa		13.58	□□□□□ -0.24
NPLOC4-208	ENST00000572351	UBR1	Q8IWV7	1749 aa		13.58	□□□□□ -0.24
NPLOC4-208	ENST00000572351	SLIT1	O75093	1534 aa		13.58	□□□□□ -0.24
NPLOC4-208	ENST00000572351	NEURL4	Q96JN8	1562 aa		13.58	□□□□□ -0.24
NPLOC4-208	ENST00000572351	ZFYVE9	O95405	1425 aa		13.57	□□□□□ -0.24
NPLOC4-208	ENST00000572351	KDM5A	P29375	1690 aa	Known RBP	13.56	□□□□□ -0.24
NPLOC4-208	ENST00000572351	SETD1B	Q9UPS6	1966 aa	Known RBP	13.56	□□□□□ -0.24
NPLOC4-208	ENST00000572351	STAC3	Q96MF2	364 aa		13.56	□□□□□ -0.24
NPLOC4-208	ENST00000572351	TIMELESS	Q9UNS1	1208 aa		13.56	□□□□□ -0.24
NPLOC4-208	ENST00000572351	KIF1B	O60333	1816 aa		13.55	□□□□□ -0.24
NPLOC4-208	ENST00000572351	NEXMIF	Q5QGS0	1516 aa		13.54	□□□□□ -0.24
NPLOC4-208	ENST00000572351	ADGRF5	Q8IZF2	1346 aa		13.54	□□□□□ -0.24
NPLOC4-208	ENST00000572351	PLEKHG1	Q9ULL1	1385 aa		13.54	□□□□□ -0.24
NPLOC4-208	ENST00000572351	NPHP4	O75161	1426 aa	Predicted RBP	13.54	□□□□□ -0.24
NPLOC4-208	ENST00000572351	DMRT2	Q9Y5R5	561 aa		13.53	□□□□□ -0.24
NPLOC4-208	ENST00000572351	MYOM2	P54296	1465 aa		13.52	□□□□□ -0.25
NPLOC4-208	ENST00000572351	SLC26A8	Q96RN1	970 aa		13.51	□□□□□ -0.25
NPLOC4-208	ENST00000572351	PIK3C2G	O75747	1445 aa		13.49	□□□□□ -0.25
NPLOC4-208	ENST00000572351	PPP4R3CP	Q6ZMV5	832 aa		13.49	□□□□□ -0.25
NPLOC4-208	ENST00000572351	MED14	O60244	1454 aa		13.48	□□□□□ -0.25
NPLOC4-208	ENST00000572351	PRAG1	Q86YV5	1406 aa		13.47	□□□□□ -0.25
NPLOC4-208	ENST00000572351	CFAP70	Q5T0N1	1121 aa		13.47	□□□□□ -0.25
NPLOC4-208	ENST00000572351	C14orf93	Q9H972	538 aa	Known RBP	13.47	□□□□□ -0.25
NPLOC4-208	ENST00000572351	TBX22	Q9Y458	520 aa		13.47	□□□□□ -0.25
NPLOC4-208	ENST00000572351	NRXN1	Q9ULB1	1477 aa		13.47	□□□□□ -0.25
NPLOC4-208	ENST00000572351	ZEB1	P37275	1124 aa	Predicted RBP	13.46	□□□□□ -0.25
NPLOC4-208	ENST00000572351	ADAMTS13	Q76LX8	1427 aa		13.46	□□□□□ -0.26
NPLOC4-208	ENST00000572351	MYO5B	Q9ULV0	1848 aa		13.46	□□□□□ -0.26
NPLOC4-208	ENST00000572351	NBPF8	Q3BBV2	869 aa		13.45	□□□□□ -0.26
NPLOC4-208	ENST00000572351	SETBP1	Q9Y6X0	1596 aa		13.45	□□□□□ -0.26
NPLOC4-208	ENST00000572351	TMEM132E	Q6IEE7	984 aa		13.44	□□□□□ -0.26
NPLOC4-208	ENST00000572351	PPL	O60437	1756 aa		13.44	□□□□□ -0.26
NPLOC4-208	ENST00000572351	POLR1A	O95602	1720 aa	Predicted RBP	13.43	□□□□□ -0.26
NPLOC4-208	ENST00000572351	IQGAP1	P46940	1657 aa		13.43	□□□□□ -0.26
NPLOC4-208	ENST00000572351	ROCK2	O75116	1388 aa	Known RBP	13.43	□□□□□ -0.26
NPLOC4-208	ENST00000572351	MET	P08581	1390 aa		13.43	□□□□□ -0.26
NPLOC4-208	ENST00000572351	IFT172	Q9UG01	1749 aa		13.42	□□□□□ -0.26
NPLOC4-208	ENST00000572351	STK26	Q9P289	416 aa		13.42	□□□□□ -0.26
NPLOC4-208	ENST00000572351	ALK	Q9UM73	1620 aa		13.42	□□□□□ -0.26
NPLOC4-208	ENST00000572351	DIP2A	Q14689	1571 aa		13.41	□□□□□ -0.26
NPLOC4-208	ENST00000572351	NBPF1	Q3BBV0	1214 aa		13.41	□□□□□ -0.26
NPLOC4-208	ENST00000572351	PIK3R4	Q99570	1358 aa		13.41	□□□□□ -0.26
NPLOC4-208	ENST00000572351	KCNA6	P17658	529 aa		13.4	□□□□□ -0.26
NPLOC4-208	ENST00000572351	CARD11	Q9BXL7	1154 aa		13.4	□□□□□ -0.26
NPLOC4-208	ENST00000572351	AMOTL2	Q9Y2J4	779 aa		13.4	□□□□□ -0.26
NPLOC4-208	ENST00000572351	STRC	Q7RTU9	1775 aa		13.4	□□□□□ -0.26
NPLOC4-208	ENST00000572351	NRXN3	Q9Y4C0	1643 aa		13.39	□□□□□ -0.27
NPLOC4-208	ENST00000572351	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.39	□□□□□ -0.27
NPLOC4-208	ENST00000572351	LRPPRC	P42704	1394 aa	Known RBP	13.38	□□□□□ -0.27
NPLOC4-208	ENST00000572351	TRAK1	Q9UPV9	953 aa		13.38	□□□□□ -0.27
NPLOC4-208	ENST00000572351	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.38	□□□□□ -0.27
NPLOC4-208	ENST00000572351	RALGAPB	Q86X10	1494 aa		13.37	□□□□□ -0.27
NPLOC4-208	ENST00000572351	LAMC1	P11047	1609 aa		13.37	□□□□□ -0.27
NPLOC4-208	ENST00000572351	PTPRU	Q92729	1446 aa		13.36	□□□□□ -0.27
NPLOC4-208	ENST00000572351	C14orf37	Q86TY3	774 aa		13.35	□□□□□ -0.27
NPLOC4-208	ENST00000572351	PROSER2	Q86WR7	435 aa	Predicted RBP	13.35	□□□□□ -0.27
NPLOC4-208	ENST00000572351	POGK	Q9P215	609 aa		13.35	□□□□□ -0.27
NPLOC4-208	ENST00000572351	ADGRB1	O14514	1584 aa		13.35	□□□□□ -0.27
NPLOC4-208	ENST00000572351	ASXL1	Q8IXJ9	1541 aa		13.34	□□□□□ -0.27
NPLOC4-208	ENST00000572351	EIF3A	Q14152	1382 aa	Known RBP	13.34	□□□□□ -0.27
NPLOC4-208	ENST00000572351	GPRASP1	Q5JY77	1395 aa		13.34	□□□□□ -0.27
NPLOC4-208	ENST00000572351	ABCC11	Q96J66	1382 aa		13.34	□□□□□ -0.27
NPLOC4-208	ENST00000572351	KCNA4	P22459	653 aa		13.34	□□□□□ -0.27
NPLOC4-208	ENST00000572351	PRAM1	Q96QH2	718 aa		13.33	□□□□□ -0.28
NPLOC4-208	ENST00000572351	ROBO2	Q9HCK4	1378 aa		13.32	□□□□□ -0.28
NPLOC4-208	ENST00000572351	TRPM1	Q7Z4N2	1603 aa		13.32	□□□□□ -0.28
NPLOC4-208	ENST00000572351	NKTR	P30414	1462 aa	Known RBP	13.32	□□□□□ -0.28
NPLOC4-208	ENST00000572351	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.32	□□□□□ -0.28
NPLOC4-208	ENST00000572351	RBM33	Q96EV2	1170 aa	Known RBP	13.32	□□□□□ -0.28
NPLOC4-208	ENST00000572351	TECPR2	O15040	1411 aa		13.31	□□□□□ -0.28
NPLOC4-208	ENST00000572351	PTCH1	Q13635	1447 aa		13.31	□□□□□ -0.28
NPLOC4-208	ENST00000572351	KIAA1210	Q9ULL0	1709 aa		13.31	□□□□□ -0.28
NPLOC4-208	ENST00000572351	WAPL	Q7Z5K2	1190 aa		13.31	□□□□□ -0.28
NPLOC4-208	ENST00000572351	SIRT1	Q96EB6	747 aa		13.31	□□□□□ -0.28
NPLOC4-208	ENST00000572351	USP47	Q96K76	1375 aa		13.31	□□□□□ -0.28
NPLOC4-208	ENST00000572351	CPS1	P31327	1500 aa		13.3	□□□□□ -0.28
NPLOC4-208	ENST00000572351	NWD1	Q149M9	1564 aa		13.3	□□□□□ -0.28
NPLOC4-208	ENST00000572351	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.3	□□□□□ -0.28
NPLOC4-208	ENST00000572351	TMEM94	Q12767	1356 aa		13.3	□□□□□ -0.28
NPLOC4-208	ENST00000572351	SETD1A	O15047	1707 aa	Known RBP	13.3	□□□□□ -0.28
NPLOC4-208	ENST00000572351	FAM135B	Q49AJ0	1406 aa		13.3	□□□□□ -0.28
NPLOC4-208	ENST00000572351	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.29	□□□□□ -0.28
NPLOC4-208	ENST00000572351	PLEKHH1	Q9ULM0	1364 aa		13.29	□□□□□ -0.28
NPLOC4-208	ENST00000572351	DLC1	Q96QB1	1528 aa		13.29	□□□□□ -0.28
NPLOC4-208	ENST00000572351	XRN1	Q8IZH2	1706 aa	Known RBP	13.27	□□□□□ -0.29
NPLOC4-208	ENST00000572351	ST20-MTHFS	A0A0A6YYL1	179 aa		13.26	□□□□□ -0.29
NPLOC4-208	ENST00000572351	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.26	□□□□□ -0.29
NPLOC4-208	ENST00000572351	LRRC7	Q96NW7	1537 aa		13.26	□□□□□ -0.29

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