RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 BCANQ96GW7 911 aa13.62□□□□□ -0.23
NPLOC4-208ENST00000572351 RIMS2Q9UQ26 1411 aa13.62□□□□□ -0.23
NPLOC4-208ENST00000572351 TMEM131LA2VDJ0 1609 aa13.61□□□□□ -0.23
NPLOC4-208ENST00000572351 CFAP65Q6ZU64 1925 aaKnown RBP13.6□□□□□ -0.23
NPLOC4-208ENST00000572351 ZNF142P52746 1687 aaPredicted RBP13.6□□□□□ -0.23
NPLOC4-208ENST00000572351 VGFO15240 615 aaPredicted RBP13.6□□□□□ -0.23
NPLOC4-208ENST00000572351 DCAF11Q8TEB1 546 aa13.6□□□□□ -0.23
NPLOC4-208ENST00000572351 KDM2AQ9Y2K7 1162 aa13.6□□□□□ -0.23
NPLOC4-208ENST00000572351 L3MBTL2Q969R5 705 aa13.59□□□□□ -0.23
NPLOC4-208ENST00000572351 NCKAP5LQ9HCH0 1330 aa13.59□□□□□ -0.23
NPLOC4-208ENST00000572351 LTKP29376 864 aa13.58□□□□□ -0.24
NPLOC4-208ENST00000572351 SCAF11Q99590 1463 aaKnown RBP13.58□□□□□ -0.24
NPLOC4-208ENST00000572351 ARHGAP23Q9P227 1491 aa13.58□□□□□ -0.24
NPLOC4-208ENST00000572351 UBR1Q8IWV7 1749 aa13.58□□□□□ -0.24
NPLOC4-208ENST00000572351 SLIT1O75093 1534 aa13.58□□□□□ -0.24
NPLOC4-208ENST00000572351 NEURL4Q96JN8 1562 aa13.58□□□□□ -0.24
NPLOC4-208ENST00000572351 ZFYVE9O95405 1425 aa13.57□□□□□ -0.24
NPLOC4-208ENST00000572351 KDM5AP29375 1690 aaKnown RBP13.56□□□□□ -0.24
NPLOC4-208ENST00000572351 SETD1BQ9UPS6 1966 aaKnown RBP13.56□□□□□ -0.24
NPLOC4-208ENST00000572351 STAC3Q96MF2 364 aa13.56□□□□□ -0.24
NPLOC4-208ENST00000572351 TIMELESSQ9UNS1 1208 aa13.56□□□□□ -0.24
NPLOC4-208ENST00000572351 KIF1BO60333 1816 aa13.55□□□□□ -0.24
NPLOC4-208ENST00000572351 NEXMIFQ5QGS0 1516 aa13.54□□□□□ -0.24
NPLOC4-208ENST00000572351 ADGRF5Q8IZF2 1346 aa13.54□□□□□ -0.24
NPLOC4-208ENST00000572351 PLEKHG1Q9ULL1 1385 aa13.54□□□□□ -0.24
NPLOC4-208ENST00000572351 NPHP4O75161 1426 aaPredicted RBP13.54□□□□□ -0.24
NPLOC4-208ENST00000572351 DMRT2Q9Y5R5 561 aa13.53□□□□□ -0.24
NPLOC4-208ENST00000572351 MYOM2P54296 1465 aa13.52□□□□□ -0.25
NPLOC4-208ENST00000572351 SLC26A8Q96RN1 970 aa13.51□□□□□ -0.25
NPLOC4-208ENST00000572351 PIK3C2GO75747 1445 aa13.49□□□□□ -0.25
NPLOC4-208ENST00000572351 PPP4R3CPQ6ZMV5 832 aa13.49□□□□□ -0.25
NPLOC4-208ENST00000572351 MED14O60244 1454 aa13.48□□□□□ -0.25
NPLOC4-208ENST00000572351 PRAG1Q86YV5 1406 aa13.47□□□□□ -0.25
NPLOC4-208ENST00000572351 CFAP70Q5T0N1 1121 aa13.47□□□□□ -0.25
NPLOC4-208ENST00000572351 C14orf93Q9H972 538 aaKnown RBP13.47□□□□□ -0.25
NPLOC4-208ENST00000572351 TBX22Q9Y458 520 aa13.47□□□□□ -0.25
NPLOC4-208ENST00000572351 NRXN1Q9ULB1 1477 aa13.47□□□□□ -0.25
NPLOC4-208ENST00000572351 ZEB1P37275 1124 aaPredicted RBP13.46□□□□□ -0.25
NPLOC4-208ENST00000572351 ADAMTS13Q76LX8 1427 aa13.46□□□□□ -0.26
NPLOC4-208ENST00000572351 MYO5BQ9ULV0 1848 aa13.46□□□□□ -0.26
NPLOC4-208ENST00000572351 NBPF8Q3BBV2 869 aa13.45□□□□□ -0.26
NPLOC4-208ENST00000572351 SETBP1Q9Y6X0 1596 aa13.45□□□□□ -0.26
NPLOC4-208ENST00000572351 TMEM132EQ6IEE7 984 aa13.44□□□□□ -0.26
NPLOC4-208ENST00000572351 PPLO60437 1756 aa13.44□□□□□ -0.26
NPLOC4-208ENST00000572351 POLR1AO95602 1720 aaPredicted RBP13.43□□□□□ -0.26
NPLOC4-208ENST00000572351 IQGAP1P46940 1657 aa13.43□□□□□ -0.26
NPLOC4-208ENST00000572351 ROCK2O75116 1388 aaKnown RBP13.43□□□□□ -0.26
NPLOC4-208ENST00000572351 METP08581 1390 aa13.43□□□□□ -0.26
NPLOC4-208ENST00000572351 IFT172Q9UG01 1749 aa13.42□□□□□ -0.26
NPLOC4-208ENST00000572351 STK26Q9P289 416 aa13.42□□□□□ -0.26
NPLOC4-208ENST00000572351 ALKQ9UM73 1620 aa13.42□□□□□ -0.26
NPLOC4-208ENST00000572351 DIP2AQ14689 1571 aa13.41□□□□□ -0.26
NPLOC4-208ENST00000572351 NBPF1Q3BBV0 1214 aa13.41□□□□□ -0.26
NPLOC4-208ENST00000572351 PIK3R4Q99570 1358 aa13.41□□□□□ -0.26
NPLOC4-208ENST00000572351 KCNA6P17658 529 aa13.4□□□□□ -0.26
NPLOC4-208ENST00000572351 CARD11Q9BXL7 1154 aa13.4□□□□□ -0.26
NPLOC4-208ENST00000572351 AMOTL2Q9Y2J4 779 aa13.4□□□□□ -0.26
NPLOC4-208ENST00000572351 STRCQ7RTU9 1775 aa13.4□□□□□ -0.26
NPLOC4-208ENST00000572351 NRXN3Q9Y4C0 1643 aa13.39□□□□□ -0.27
NPLOC4-208ENST00000572351 ZNF335Q9H4Z2 1342 aaPredicted RBP13.39□□□□□ -0.27
NPLOC4-208ENST00000572351 LRPPRCP42704 1394 aaKnown RBP13.38□□□□□ -0.27
NPLOC4-208ENST00000572351 TRAK1Q9UPV9 953 aa13.38□□□□□ -0.27
NPLOC4-208ENST00000572351 YTHDC2Q9H6S0 1430 aaKnown RBP13.38□□□□□ -0.27
NPLOC4-208ENST00000572351 RALGAPBQ86X10 1494 aa13.37□□□□□ -0.27
NPLOC4-208ENST00000572351 LAMC1P11047 1609 aa13.37□□□□□ -0.27
NPLOC4-208ENST00000572351 PTPRUQ92729 1446 aa13.36□□□□□ -0.27
NPLOC4-208ENST00000572351 C14orf37Q86TY3 774 aa13.35□□□□□ -0.27
NPLOC4-208ENST00000572351 PROSER2Q86WR7 435 aaPredicted RBP13.35□□□□□ -0.27
NPLOC4-208ENST00000572351 POGKQ9P215 609 aa13.35□□□□□ -0.27
NPLOC4-208ENST00000572351 ADGRB1O14514 1584 aa13.35□□□□□ -0.27
NPLOC4-208ENST00000572351 ASXL1Q8IXJ9 1541 aa13.34□□□□□ -0.27
NPLOC4-208ENST00000572351 EIF3AQ14152 1382 aaKnown RBP13.34□□□□□ -0.27
NPLOC4-208ENST00000572351 GPRASP1Q5JY77 1395 aa13.34□□□□□ -0.27
NPLOC4-208ENST00000572351 ABCC11Q96J66 1382 aa13.34□□□□□ -0.27
NPLOC4-208ENST00000572351 KCNA4P22459 653 aa13.34□□□□□ -0.27
NPLOC4-208ENST00000572351 PRAM1Q96QH2 718 aa13.33□□□□□ -0.28
NPLOC4-208ENST00000572351 ROBO2Q9HCK4 1378 aa13.32□□□□□ -0.28
NPLOC4-208ENST00000572351 TRPM1Q7Z4N2 1603 aa13.32□□□□□ -0.28
NPLOC4-208ENST00000572351 NKTRP30414 1462 aaKnown RBP13.32□□□□□ -0.28
NPLOC4-208ENST00000572351 SAFB2Q14151 953 aaKnown RBP eCLIP13.32□□□□□ -0.28
NPLOC4-208ENST00000572351 RBM33Q96EV2 1170 aaKnown RBP13.32□□□□□ -0.28
NPLOC4-208ENST00000572351 TECPR2O15040 1411 aa13.31□□□□□ -0.28
NPLOC4-208ENST00000572351 PTCH1Q13635 1447 aa13.31□□□□□ -0.28
NPLOC4-208ENST00000572351 KIAA1210Q9ULL0 1709 aa13.31□□□□□ -0.28
NPLOC4-208ENST00000572351 WAPLQ7Z5K2 1190 aa13.31□□□□□ -0.28
NPLOC4-208ENST00000572351 SIRT1Q96EB6 747 aa13.31□□□□□ -0.28
NPLOC4-208ENST00000572351 USP47Q96K76 1375 aa13.31□□□□□ -0.28
NPLOC4-208ENST00000572351 CPS1P31327 1500 aa13.3□□□□□ -0.28
NPLOC4-208ENST00000572351 NWD1Q149M9 1564 aa13.3□□□□□ -0.28
NPLOC4-208ENST00000572351 CENPJQ9HC77 1338 aaPredicted RBP13.3□□□□□ -0.28
NPLOC4-208ENST00000572351 TMEM94Q12767 1356 aa13.3□□□□□ -0.28
NPLOC4-208ENST00000572351 SETD1AO15047 1707 aaKnown RBP13.3□□□□□ -0.28
NPLOC4-208ENST00000572351 FAM135BQ49AJ0 1406 aa13.3□□□□□ -0.28
NPLOC4-208ENST00000572351 EIF4G2P78344 907 aaKnown RBP eCLIP13.29□□□□□ -0.28
NPLOC4-208ENST00000572351 PLEKHH1Q9ULM0 1364 aa13.29□□□□□ -0.28
NPLOC4-208ENST00000572351 DLC1Q96QB1 1528 aa13.29□□□□□ -0.28
NPLOC4-208ENST00000572351 XRN1Q8IZH2 1706 aaKnown RBP13.27□□□□□ -0.29
NPLOC4-208ENST00000572351 ST20-MTHFSA0A0A6YYL1 179 aa13.26□□□□□ -0.29
NPLOC4-208ENST00000572351 MINK1Q8N4C8 1332 aaPredicted RBP13.26□□□□□ -0.29
NPLOC4-208ENST00000572351 LRRC7Q96NW7 1537 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms