RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 RIMS2Q9UQ26 1411 aa20.65■□□□□ 0.9
RPAIN-211ENST00000572174 MPHOSPH9Q99550 1183 aa20.65■□□□□ 0.9
RPAIN-211ENST00000572174 PPP1R15AO75807 674 aaPredicted RBP20.63■□□□□ 0.89
RPAIN-211ENST00000572174 DIP2AQ14689 1571 aa20.63■□□□□ 0.89
RPAIN-211ENST00000572174 CCDC144AA2RUR9 1427 aa20.62■□□□□ 0.89
RPAIN-211ENST00000572174 LTKP29376 864 aa20.61■□□□□ 0.89
RPAIN-211ENST00000572174 CERKQ8TCT0 537 aa20.61■□□□□ 0.89
RPAIN-211ENST00000572174 PLEKHG1Q9ULL1 1385 aa20.6■□□□□ 0.89
RPAIN-211ENST00000572174 ZNF335Q9H4Z2 1342 aaPredicted RBP20.58■□□□□ 0.89
RPAIN-211ENST00000572174 PPLO60437 1756 aa20.58■□□□□ 0.89
RPAIN-211ENST00000572174 ZNF326Q5BKZ1 582 aaKnown RBP20.57■□□□□ 0.88
RPAIN-211ENST00000572174 NEXMIFQ5QGS0 1516 aa20.55■□□□□ 0.88
RPAIN-211ENST00000572174 BCANQ96GW7 911 aa20.55■□□□□ 0.88
RPAIN-211ENST00000572174 STRCP1A6NGW2 1772 aa20.54■□□□□ 0.88
RPAIN-211ENST00000572174 CHD2O14647 1828 aaKnown RBP20.54■□□□□ 0.88
RPAIN-211ENST00000572174 RPGRIP1LQ68CZ1 1315 aa20.53■□□□□ 0.88
RPAIN-211ENST00000572174 FBXO41Q8TF61 875 aa20.53■□□□□ 0.88
RPAIN-211ENST00000572174 NWD1Q149M9 1564 aa20.53■□□□□ 0.88
RPAIN-211ENST00000572174 SETBP1Q9Y6X0 1596 aa20.53■□□□□ 0.88
RPAIN-211ENST00000572174 IFT172Q9UG01 1749 aa20.53■□□□□ 0.88
RPAIN-211ENST00000572174 NKTRP30414 1462 aaKnown RBP20.51■□□□□ 0.87
RPAIN-211ENST00000572174 TRIM26Q12899 539 aaPredicted RBP20.5■□□□□ 0.87
RPAIN-211ENST00000572174 FOXD1Q16676 465 aa20.5■□□□□ 0.87
RPAIN-211ENST00000572174 PIK3R4Q99570 1358 aa20.49■□□□□ 0.87
RPAIN-211ENST00000572174 VGFO15240 615 aaPredicted RBP20.49■□□□□ 0.87
RPAIN-211ENST00000572174 NRXN3Q9Y4C0 1643 aa20.47■□□□□ 0.87
RPAIN-211ENST00000572174 TBX22Q9Y458 520 aa20.47■□□□□ 0.87
RPAIN-211ENST00000572174 SPATA31E1Q6ZUB1 1445 aa20.46■□□□□ 0.87
RPAIN-211ENST00000572174 ANKRD30BQ9BXX2 1392 aa20.46■□□□□ 0.87
RPAIN-211ENST00000572174 KCNA6P17658 529 aa20.45■□□□□ 0.86
RPAIN-211ENST00000572174 SLC26A8Q96RN1 970 aa20.45■□□□□ 0.86
RPAIN-211ENST00000572174 ADAMTS13Q76LX8 1427 aa20.44■□□□□ 0.86
RPAIN-211ENST00000572174 XIRP1Q702N8 1843 aaKnown RBP20.43■□□□□ 0.86
RPAIN-211ENST00000572174 LRRC7Q96NW7 1537 aa20.43■□□□□ 0.86
RPAIN-211ENST00000572174 NUTM2DQ5VT03 806 aaPredicted RBP20.42■□□□□ 0.86
RPAIN-211ENST00000572174 LAMC1P11047 1609 aa20.42■□□□□ 0.86
RPAIN-211ENST00000572174 SETD1AO15047 1707 aaKnown RBP20.41■□□□□ 0.86
RPAIN-211ENST00000572174 XRN1Q8IZH2 1706 aaKnown RBP20.4■□□□□ 0.86
RPAIN-211ENST00000572174 ILDR1Q86SU0 546 aaPredicted RBP20.39■□□□□ 0.85
RPAIN-211ENST00000572174 MYOM2P54296 1465 aa20.38■□□□□ 0.85
RPAIN-211ENST00000572174 TOM1O60784 492 aa20.37■□□□□ 0.85
RPAIN-211ENST00000572174 RGL3Q3MIN7 710 aa20.37■□□□□ 0.85
RPAIN-211ENST00000572174 ALKQ9UM73 1620 aa20.37■□□□□ 0.85
RPAIN-211ENST00000572174 NCOA3Q9Y6Q9 1424 aa20.36■□□□□ 0.85
RPAIN-211ENST00000572174 STAC3Q96MF2 364 aa20.36■□□□□ 0.85
RPAIN-211ENST00000572174 UBAP1LF5GYI3 381 aa20.34■□□□□ 0.85
RPAIN-211ENST00000572174 PROSER2Q86WR7 435 aaPredicted RBP20.34■□□□□ 0.85
RPAIN-211ENST00000572174 SENP3Q9H4L4 574 aaPredicted RBP20.33■□□□□ 0.85
RPAIN-211ENST00000572174 TMEM94Q12767 1356 aa20.33■□□□□ 0.84
RPAIN-211ENST00000572174 PIK3C2GO75747 1445 aa20.32■□□□□ 0.84
RPAIN-211ENST00000572174 MSH6P52701 1360 aa20.31■□□□□ 0.84
RPAIN-211ENST00000572174 NRXN1Q9ULB1 1477 aa20.3■□□□□ 0.84
RPAIN-211ENST00000572174 KNDC1Q76NI1 1749 aa20.3■□□□□ 0.84
RPAIN-211ENST00000572174 PRAG1Q86YV5 1406 aa20.29■□□□□ 0.84
RPAIN-211ENST00000572174 AMOTL2Q9Y2J4 779 aa20.29■□□□□ 0.84
RPAIN-211ENST00000572174 PTCH1Q13635 1447 aa20.28■□□□□ 0.84
RPAIN-211ENST00000572174 METP08581 1390 aa20.28■□□□□ 0.84
RPAIN-211ENST00000572174 PTPRUQ92729 1446 aa20.27■□□□□ 0.83
RPAIN-211ENST00000572174 ADGRF5Q8IZF2 1346 aa20.27■□□□□ 0.83
RPAIN-211ENST00000572174 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.25■□□□□ 0.83
RPAIN-211ENST00000572174 C14orf37Q86TY3 774 aa20.25■□□□□ 0.83
RPAIN-211ENST00000572174 DCCP43146 1447 aa20.25■□□□□ 0.83
RPAIN-211ENST00000572174 KIAA1210Q9ULL0 1709 aa20.24■□□□□ 0.83
RPAIN-211ENST00000572174 DHX57Q6P158 1386 aaKnown RBP20.23■□□□□ 0.83
RPAIN-211ENST00000572174 SCAF1Q9H7N4 1312 aaKnown RBP20.23■□□□□ 0.83
RPAIN-211ENST00000572174 NALCNQ8IZF0 1738 aa20.22■□□□□ 0.83
RPAIN-211ENST00000572174 TECPR2O15040 1411 aa20.2■□□□□ 0.82
RPAIN-211ENST00000572174 DCAF11Q8TEB1 546 aa20.2■□□□□ 0.82
RPAIN-211ENST00000572174 ADGRL3Q9HAR2 1447 aa20.19■□□□□ 0.82
RPAIN-211ENST00000572174 CADPS2Q86UW7 1296 aa20.19■□□□□ 0.82
RPAIN-211ENST00000572174 C19orf44Q9H6X5 657 aa20.19■□□□□ 0.82
RPAIN-211ENST00000572174 C14orf93Q9H972 538 aaKnown RBP20.19■□□□□ 0.82
RPAIN-211ENST00000572174 LRPPRCP42704 1394 aaKnown RBP20.19■□□□□ 0.82
RPAIN-211ENST00000572174 ASXL1Q8IXJ9 1541 aa20.18■□□□□ 0.82
RPAIN-211ENST00000572174 PIP4K2BP78356 416 aa20.18■□□□□ 0.82
RPAIN-211ENST00000572174 ROBO1Q9Y6N7 1651 aa20.18■□□□□ 0.82
RPAIN-211ENST00000572174 ATF3P18847 181 aa20.17■□□□□ 0.82
RPAIN-211ENST00000572174 YTHDC2Q9H6S0 1430 aaKnown RBP20.17■□□□□ 0.82
RPAIN-211ENST00000572174 ABCC11Q96J66 1382 aa20.16■□□□□ 0.82
RPAIN-211ENST00000572174 FAM135BQ49AJ0 1406 aa20.16■□□□□ 0.82
RPAIN-211ENST00000572174 DLC1Q96QB1 1528 aa20.14■□□□□ 0.81
RPAIN-211ENST00000572174 KDM2AQ9Y2K7 1162 aa20.14■□□□□ 0.81
RPAIN-211ENST00000572174 ROBO2Q9HCK4 1378 aa20.13■□□□□ 0.81
RPAIN-211ENST00000572174 RBM33Q96EV2 1170 aaKnown RBP20.13■□□□□ 0.81
RPAIN-211ENST00000572174 ADGRB1O14514 1584 aa20.12■□□□□ 0.81
RPAIN-211ENST00000572174 CDC42BPGQ6DT37 1551 aa20.12■□□□□ 0.81
RPAIN-211ENST00000572174 SIRT1Q96EB6 747 aa20.11■□□□□ 0.81
RPAIN-211ENST00000572174 SLAIN2Q9P270 581 aa20.11■□□□□ 0.81
RPAIN-211ENST00000572174 CFAP70Q5T0N1 1121 aa20.1■□□□□ 0.81
RPAIN-211ENST00000572174 PHLPP1O60346 1717 aa20.09■□□□□ 0.81
RPAIN-211ENST00000572174 ARHGEF28Q8N1W1 1705 aaKnown RBP20.08■□□□□ 0.81
RPAIN-211ENST00000572174 TMEM132EQ6IEE7 984 aa20.08■□□□□ 0.81
RPAIN-211ENST00000572174 PCGF6Q9BYE7 350 aa20.08■□□□□ 0.81
RPAIN-211ENST00000572174 STK26Q9P289 416 aa20.08■□□□□ 0.81
RPAIN-211ENST00000572174 TONSLQ96HA7 1378 aa20.07■□□□□ 0.8
RPAIN-211ENST00000572174 CLSPNQ9HAW4 1339 aa20.06■□□□□ 0.8
RPAIN-211ENST00000572174 NEUROD1Q13562 356 aa20.06■□□□□ 0.8
RPAIN-211ENST00000572174 TRPM1Q7Z4N2 1603 aa20.05■□□□□ 0.8
RPAIN-211ENST00000572174 MST1RQ04912 1400 aa20.05■□□□□ 0.8
RPAIN-211ENST00000572174 AHDC1Q5TGY3 1603 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms