RNA–Protein interactions for RNA: ENST00000571880.1

RAB40B-205, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,020 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-205ENST00000571880 SPHKAPQ2M3C7 1700 aa25.41■■□□□ 1.66
RAB40B-205ENST00000571880 NWD1Q149M9 1564 aa25.39■■□□□ 1.66
RAB40B-205ENST00000571880 ZFYVE9O95405 1425 aa25.39■■□□□ 1.66
RAB40B-205ENST00000571880 CHGAP10645 457 aaKnown RBP25.39■■□□□ 1.66
RAB40B-205ENST00000571880 BCANQ96GW7 911 aa25.39■■□□□ 1.66
RAB40B-205ENST00000571880 RIMS2Q9UQ26 1411 aa25.38■■□□□ 1.65
RAB40B-205ENST00000571880 SLC52A1Q9NWF4 448 aa25.38■■□□□ 1.65
RAB40B-205ENST00000571880 NUP155O75694 1391 aa25.38■■□□□ 1.65
RAB40B-205ENST00000571880 RBM33Q96EV2 1170 aaKnown RBP25.37■■□□□ 1.65
RAB40B-205ENST00000571880 CHD2O14647 1828 aaKnown RBP25.37■■□□□ 1.65
RAB40B-205ENST00000571880 PPP1R15AO75807 674 aaPredicted RBP25.34■■□□□ 1.65
RAB40B-205ENST00000571880 NUTM2DQ5VT03 806 aaPredicted RBP25.34■■□□□ 1.65
RAB40B-205ENST00000571880 TMEM94Q12767 1356 aa25.33■■□□□ 1.65
RAB40B-205ENST00000571880 RRBP1Q9P2E9 1410 aaKnown RBP25.32■■□□□ 1.64
RAB40B-205ENST00000571880 ROBO1Q9Y6N7 1651 aa25.3■■□□□ 1.64
RAB40B-205ENST00000571880 NKTRP30414 1462 aaKnown RBP25.3■■□□□ 1.64
RAB40B-205ENST00000571880 PLEKHG1Q9ULL1 1385 aa25.3■■□□□ 1.64
RAB40B-205ENST00000571880 KCNA6P17658 529 aa25.28■■□□□ 1.64
RAB40B-205ENST00000571880 CLTCL1P53675 1640 aa25.27■■□□□ 1.64
RAB40B-205ENST00000571880 PROSER2Q86WR7 435 aaPredicted RBP25.27■■□□□ 1.64
RAB40B-205ENST00000571880 NAIPQ13075 1403 aa25.23■■□□□ 1.63
RAB40B-205ENST00000571880 KIF1BO60333 1816 aa25.23■■□□□ 1.63
RAB40B-205ENST00000571880 NRXN3Q9Y4C0 1643 aa25.23■■□□□ 1.63
RAB40B-205ENST00000571880 DIP2AQ14689 1571 aa25.22■■□□□ 1.63
RAB40B-205ENST00000571880 ADAMTS13Q76LX8 1427 aa25.21■■□□□ 1.63
RAB40B-205ENST00000571880 SOCS7O14512 581 aa25.21■■□□□ 1.63
RAB40B-205ENST00000571880 PHLPP1O60346 1717 aa25.17■■□□□ 1.62
RAB40B-205ENST00000571880 TRPM2O94759 1503 aa25.17■■□□□ 1.62
RAB40B-205ENST00000571880 MSH6P52701 1360 aa25.17■■□□□ 1.62
RAB40B-205ENST00000571880 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.16■■□□□ 1.62
RAB40B-205ENST00000571880 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.15■■□□□ 1.62
RAB40B-205ENST00000571880 HDGFP51858 240 aaKnown RBP25.15■■□□□ 1.62
RAB40B-205ENST00000571880 PHF23Q9BUL5 403 aaPredicted RBP25.15■■□□□ 1.62
RAB40B-205ENST00000571880 XRN1Q8IZH2 1706 aaKnown RBP25.13■■□□□ 1.61
RAB40B-205ENST00000571880 FAM135BQ49AJ0 1406 aa25.12■■□□□ 1.61
RAB40B-205ENST00000571880 NEXMIFQ5QGS0 1516 aa25.12■■□□□ 1.61
RAB40B-205ENST00000571880 ZNF326Q5BKZ1 582 aaKnown RBP25.12■■□□□ 1.61
RAB40B-205ENST00000571880 SETBP1Q9Y6X0 1596 aa25.12■■□□□ 1.61
RAB40B-205ENST00000571880 HFM1A2PYH4 1435 aa25.12■■□□□ 1.61
RAB40B-205ENST00000571880 PTPRUQ92729 1446 aa25.12■■□□□ 1.61
RAB40B-205ENST00000571880 C14orf37Q86TY3 774 aa25.1■■□□□ 1.61
RAB40B-205ENST00000571880 TRIM52Q96A61 297 aa25.1■■□□□ 1.61
RAB40B-205ENST00000571880 TBX22Q9Y458 520 aa25.1■■□□□ 1.61
RAB40B-205ENST00000571880 SETD1AO15047 1707 aaKnown RBP25.04■■□□□ 1.6
RAB40B-205ENST00000571880 PPLO60437 1756 aa25.04■■□□□ 1.6
RAB40B-205ENST00000571880 COL16A1Q07092 1604 aaPredicted RBP25.04■■□□□ 1.6
RAB40B-205ENST00000571880 PIK3R4Q99570 1358 aa25.03■■□□□ 1.6
RAB40B-205ENST00000571880 NALCNQ8IZF0 1738 aa25.03■■□□□ 1.6
RAB40B-205ENST00000571880 AMOTL2Q9Y2J4 779 aa25.02■■□□□ 1.6
RAB40B-205ENST00000571880 SLAIN2Q9P270 581 aa25.01■■□□□ 1.59
RAB40B-205ENST00000571880 METP08581 1390 aa25■■□□□ 1.59
RAB40B-205ENST00000571880 FOXD1Q16676 465 aa24.98■■□□□ 1.59
RAB40B-205ENST00000571880 SLC4A1APQ9BWU0 796 aaKnown RBP24.98■■□□□ 1.59
RAB40B-205ENST00000571880 NCOA3Q9Y6Q9 1424 aa24.95■■□□□ 1.59
RAB40B-205ENST00000571880 AHDC1Q5TGY3 1603 aaPredicted RBP24.94■■□□□ 1.58
RAB40B-205ENST00000571880 ATF3P18847 181 aa24.93■■□□□ 1.58
RAB40B-205ENST00000571880 RGS17Q9UGC6 210 aaPredicted RBP24.93■■□□□ 1.58
RAB40B-205ENST00000571880 IFT172Q9UG01 1749 aa24.92■■□□□ 1.58
RAB40B-205ENST00000571880 C19orf44Q9H6X5 657 aa24.91■■□□□ 1.58
RAB40B-205ENST00000571880 SHPRHQ149N8 1683 aa24.91■■□□□ 1.58
RAB40B-205ENST00000571880 CADPS2Q86UW7 1296 aa24.9■■□□□ 1.58
RAB40B-205ENST00000571880 ASXL1Q8IXJ9 1541 aa24.89■■□□□ 1.57
RAB40B-205ENST00000571880 NHSL1Q5SYE7 1610 aa24.89■■□□□ 1.57
RAB40B-205ENST00000571880 JCADQ9P266 1359 aa24.88■■□□□ 1.57
RAB40B-205ENST00000571880 LRP6O75581 1613 aa24.87■■□□□ 1.57
RAB40B-205ENST00000571880 DCCP43146 1447 aa24.86■■□□□ 1.57
RAB40B-205ENST00000571880 MST1RQ04912 1400 aa24.86■■□□□ 1.57
RAB40B-205ENST00000571880 ADGRL3Q9HAR2 1447 aa24.86■■□□□ 1.57
RAB40B-205ENST00000571880 BRINP3Q76B58 766 aa24.84■■□□□ 1.57
RAB40B-205ENST00000571880 CCDC144AA2RUR9 1427 aa24.83■■□□□ 1.57
RAB40B-205ENST00000571880 POTEAQ6S8J7 498 aa24.82■■□□□ 1.56
RAB40B-205ENST00000571880 ROBO2Q9HCK4 1378 aa24.8■■□□□ 1.56
RAB40B-205ENST00000571880 PTCH1Q13635 1447 aa24.79■■□□□ 1.56
RAB40B-205ENST00000571880 VGFO15240 615 aaPredicted RBP24.79■■□□□ 1.56
RAB40B-205ENST00000571880 RGL3Q3MIN7 710 aa24.78■■□□□ 1.56
RAB40B-205ENST00000571880 DDX17Q92841 729 aaKnown RBP24.78■■□□□ 1.56
RAB40B-205ENST00000571880 MPHOSPH9Q99550 1183 aa24.78■■□□□ 1.56
RAB40B-205ENST00000571880 SPATA31E1Q6ZUB1 1445 aa24.76■■□□□ 1.55
RAB40B-205ENST00000571880 MEX3CQ5U5Q3 659 aaKnown RBP24.75■■□□□ 1.55
RAB40B-205ENST00000571880 RPGRIP1LQ68CZ1 1315 aa24.75■■□□□ 1.55
RAB40B-205ENST00000571880 ADGRF5Q8IZF2 1346 aa24.75■■□□□ 1.55
RAB40B-205ENST00000571880 SETD5Q9C0A6 1442 aa24.73■■□□□ 1.55
RAB40B-205ENST00000571880 KNDC1Q76NI1 1749 aa24.72■■□□□ 1.55
RAB40B-205ENST00000571880 NUTM2BA6NNL0 878 aaPredicted RBP24.72■■□□□ 1.55
RAB40B-205ENST00000571880 NUTM2EB1AL46 878 aaPredicted RBP24.72■■□□□ 1.55
RAB40B-205ENST00000571880 NUTM2AQ8IVF1 878 aaPredicted RBP24.72■■□□□ 1.55
RAB40B-205ENST00000571880 C1orf167Q5SNV9 1468 aa24.71■■□□□ 1.55
RAB40B-205ENST00000571880 SPATA31A6Q5VVP1 1343 aa24.71■■□□□ 1.55
RAB40B-205ENST00000571880 PRAG1Q86YV5 1406 aa24.69■■□□□ 1.54
RAB40B-205ENST00000571880 RAB3GAP2Q9H2M9 1393 aa24.68■■□□□ 1.54
RAB40B-205ENST00000571880 CDC42BPGQ6DT37 1551 aa24.68■■□□□ 1.54
RAB40B-205ENST00000571880 STK26Q9P289 416 aa24.67■■□□□ 1.54
RAB40B-205ENST00000571880 LAMC1P11047 1609 aa24.67■■□□□ 1.54
RAB40B-205ENST00000571880 PIK3C2GO75747 1445 aa24.65■■□□□ 1.54
RAB40B-205ENST00000571880 ORAI2Q96SN7 254 aa24.64■■□□□ 1.54
RAB40B-205ENST00000571880 PNPLA6Q8IY17 1366 aa24.64■■□□□ 1.53
RAB40B-205ENST00000571880 ANKRD30BQ9BXX2 1392 aa24.64■■□□□ 1.53
RAB40B-205ENST00000571880 TMEM132EQ6IEE7 984 aa24.63■■□□□ 1.53
RAB40B-205ENST00000571880 RGPD8O14715 1765 aaPredicted RBP24.62■■□□□ 1.53
RAB40B-205ENST00000571880 FMN2Q9NZ56 1722 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms