RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 CCDC141Q6ZP82 1450 aa21.61■■□□□ 1.05
LITAF-209ENST00000571688 FSD2A1L4K1 749 aa21.6■■□□□ 1.05
LITAF-209ENST00000571688 BCAR3O75815 825 aa21.6■■□□□ 1.05
LITAF-209ENST00000571688 ABCC2Q92887 1545 aa21.6■■□□□ 1.05
LITAF-209ENST00000571688 PIK3C2GO75747 1445 aa21.6■■□□□ 1.05
LITAF-209ENST00000571688 XRCC6P12956 609 aaKnown RBP eCLIP21.6■■□□□ 1.05
LITAF-209ENST00000571688 CGNL1Q0VF96 1302 aa21.6■■□□□ 1.05
LITAF-209ENST00000571688 SYNJ2O15056 1496 aa21.6■■□□□ 1.05
LITAF-209ENST00000571688 RGL3Q3MIN7 710 aa21.59■■□□□ 1.05
LITAF-209ENST00000571688 CLCN1P35523 988 aa21.59■■□□□ 1.05
LITAF-209ENST00000571688 SPINK5Q9NQ38 1064 aaPredicted RBP21.59■■□□□ 1.05
LITAF-209ENST00000571688 AMER1Q5JTC6 1135 aaPredicted RBP21.58■■□□□ 1.05
LITAF-209ENST00000571688 GOLGA6L3A6NEY3 463 aa21.57■■□□□ 1.04
LITAF-209ENST00000571688 NINLQ9Y2I6 1382 aa21.57■■□□□ 1.04
LITAF-209ENST00000571688 PDE3AQ14432 1141 aa21.57■■□□□ 1.04
LITAF-209ENST00000571688 KNSTRNQ9Y448 316 aa21.57■■□□□ 1.04
LITAF-209ENST00000571688 PLXNC1O60486 1568 aa21.56■■□□□ 1.04
LITAF-209ENST00000571688 CLUAP1Q96AJ1 413 aa21.56■■□□□ 1.04
LITAF-209ENST00000571688 PNNQ9H307 717 aaKnown RBP21.56■■□□□ 1.04
LITAF-209ENST00000571688 ZMYM3Q14202 1370 aa21.56■■□□□ 1.04
LITAF-209ENST00000571688 SYNMO15061 1565 aa21.56■■□□□ 1.04
LITAF-209ENST00000571688 TBC1D32Q96NH3 1257 aa21.55■■□□□ 1.04
LITAF-209ENST00000571688 UNC13BO14795 1591 aa21.55■■□□□ 1.04
LITAF-209ENST00000571688 E9PSI1 815 aa21.54■■□□□ 1.04
LITAF-209ENST00000571688 TBC1D2Q9BYX2 928 aa21.54■■□□□ 1.04
LITAF-209ENST00000571688 NAP1L5Q96NT1 182 aaPredicted RBP21.54■■□□□ 1.04
LITAF-209ENST00000571688 ASXL1Q8IXJ9 1541 aa21.53■■□□□ 1.04
LITAF-209ENST00000571688 GRIN2AQ12879 1464 aa21.53■■□□□ 1.04
LITAF-209ENST00000571688 MAGI1Q96QZ7 1491 aaPredicted RBP21.52■■□□□ 1.04
LITAF-209ENST00000571688 CCDC146Q8IYE0 955 aa21.51■■□□□ 1.03
LITAF-209ENST00000571688 MCM4P33991 863 aa21.51■■□□□ 1.03
LITAF-209ENST00000571688 PANK2Q9BZ23 570 aa21.51■■□□□ 1.03
LITAF-209ENST00000571688 IQGAP1P46940 1657 aa21.51■■□□□ 1.03
LITAF-209ENST00000571688 UPF2Q9HAU5 1272 aaKnown RBP21.5■■□□□ 1.03
LITAF-209ENST00000571688 APAF1O14727 1248 aa21.5■■□□□ 1.03
LITAF-209ENST00000571688 RRP9O43818 475 aaKnown RBP21.5■■□□□ 1.03
LITAF-209ENST00000571688 HNRNPMP52272 730 aaKnown RBP eCLIP21.49■■□□□ 1.031e-6■■■□□ 15.6
LITAF-209ENST00000571688 NPC1L1Q9UHC9 1359 aa21.49■■□□□ 1.03
LITAF-209ENST00000571688 ABCA8O94911 1581 aa21.49■■□□□ 1.03
LITAF-209ENST00000571688 MYOM1P52179 1685 aa21.48■■□□□ 1.03
LITAF-209ENST00000571688 ARXQ96QS3 562 aa21.47■■□□□ 1.03
LITAF-209ENST00000571688 IQGAP3Q86VI3 1631 aa21.47■■□□□ 1.03
LITAF-209ENST00000571688 PLEKHD1A6NEE1 506 aa21.47■■□□□ 1.03
LITAF-209ENST00000571688 HSP90AA1P07900 732 aaKnown RBP21.47■■□□□ 1.03
LITAF-209ENST00000571688 HSP90AA2PQ14568 343 aaPredicted RBP21.47■■□□□ 1.03
LITAF-209ENST00000571688 COG6Q9Y2V7 657 aa21.47■■□□□ 1.03
LITAF-209ENST00000571688 NGEFQ8N5V2 710 aa21.46■■□□□ 1.03
LITAF-209ENST00000571688 PANK1Q8TE04 598 aa21.46■■□□□ 1.03
LITAF-209ENST00000571688 DMRT2Q9Y5R5 561 aa21.46■■□□□ 1.03
LITAF-209ENST00000571688 CENPJQ9HC77 1338 aaPredicted RBP21.46■■□□□ 1.03
LITAF-209ENST00000571688 ATP10AO60312 1499 aa21.45■■□□□ 1.03
LITAF-209ENST00000571688 PMFBP1Q8TBY8 1022 aa21.45■■□□□ 1.02
LITAF-209ENST00000571688 SAMD9LQ8IVG5 1584 aa21.45■■□□□ 1.02
LITAF-209ENST00000571688 MRE11P49959 708 aa21.44■■□□□ 1.02
LITAF-209ENST00000571688 VSIG10Q8N0Z9 540 aa21.44■■□□□ 1.02
LITAF-209ENST00000571688 AAMPQ13685 434 aa21.43■■□□□ 1.02
LITAF-209ENST00000571688 ZMYND15Q9H091 742 aa21.43■■□□□ 1.02
LITAF-209ENST00000571688 GZF1Q9H116 711 aaPredicted RBP21.42■■□□□ 1.02
LITAF-209ENST00000571688 IFT140Q96RY7 1462 aa21.42■■□□□ 1.02
LITAF-209ENST00000571688 MADDQ8WXG6 1647 aa21.42■■□□□ 1.02
LITAF-209ENST00000571688 ATP10BO94823 1461 aa21.42■■□□□ 1.02
LITAF-209ENST00000571688 TRAK2O60296 914 aa21.42■■□□□ 1.02
LITAF-209ENST00000571688 CANXP27824 592 aaKnown RBP21.42■■□□□ 1.02
LITAF-209ENST00000571688 MRC2Q9UBG0 1479 aa21.41■■□□□ 1.02
LITAF-209ENST00000571688 CDCA8Q53HL2 280 aa21.41■■□□□ 1.02
LITAF-209ENST00000571688 CHMP5Q9NZZ3 219 aa21.41■■□□□ 1.02
LITAF-209ENST00000571688 MAST1Q9Y2H9 1570 aa21.41■■□□□ 1.02
LITAF-209ENST00000571688 CDC42BPBQ9Y5S2 1711 aa21.4■■□□□ 1.02
LITAF-209ENST00000571688 RTEL1-TNFRSF6BF6WH68 1400 aa21.4■■□□□ 1.02
LITAF-209ENST00000571688 PDZRN3Q9UPQ7 1066 aa21.4■■□□□ 1.02
LITAF-209ENST00000571688 PCDHB15Q9Y5E8 787 aa21.39■■□□□ 1.01
LITAF-209ENST00000571688 CARMIL2Q6F5E8 1435 aa21.39■■□□□ 1.01
LITAF-209ENST00000571688 PREX2Q70Z35 1606 aa21.38■■□□□ 1.01
LITAF-209ENST00000571688 ISY1Q9ULR0 285 aaKnown RBP21.38■■□□□ 1.01
LITAF-209ENST00000571688 RSPH4AQ5TD94 716 aa21.37■■□□□ 1.01
LITAF-209ENST00000571688 SPRYD3Q8NCJ5 442 aa21.37■■□□□ 1.01
LITAF-209ENST00000571688 GRPEL1Q9HAV7 217 aa21.37■■□□□ 1.01
LITAF-209ENST00000571688 ESPNB1AK53 854 aa21.36■■□□□ 1.01
LITAF-209ENST00000571688 SCAF11Q99590 1463 aaKnown RBP21.35■■□□□ 1.01
LITAF-209ENST00000571688 WWC1Q8IX03 1113 aa21.35■■□□□ 1.01
LITAF-209ENST00000571688 MYH16Q9H6N6 1097 aa21.35■■□□□ 1.01
LITAF-209ENST00000571688 SCAPERQ9BY12 1400 aa21.35■■□□□ 1.01
LITAF-209ENST00000571688 KDM5AP29375 1690 aaKnown RBP21.34■■□□□ 1.01
LITAF-209ENST00000571688 ERBB4Q15303 1308 aa21.34■■□□□ 1.01
LITAF-209ENST00000571688 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.34■■□□□ 1.01
LITAF-209ENST00000571688 DDX11L8A8MPP1 907 aa21.33■■□□□ 1.01
LITAF-209ENST00000571688 RARSP54136 660 aaKnown RBP21.33■■□□□ 1.01
LITAF-209ENST00000571688 ZNF692Q9BU19 519 aaPredicted RBP21.32■■□□□ 1
LITAF-209ENST00000571688 CEP152O94986 1710 aa21.32■■□□□ 1
LITAF-209ENST00000571688 RLBP1P12271 317 aa21.32■■□□□ 1
LITAF-209ENST00000571688 C22orf23Q9BZE7 217 aa21.32■■□□□ 1
LITAF-209ENST00000571688 SPHKAPQ2M3C7 1700 aa21.32■■□□□ 1
LITAF-209ENST00000571688 RWDD1Q9H446 243 aaPredicted RBP21.31■■□□□ 1
LITAF-209ENST00000571688 SYCP2Q9BX26 1530 aa21.31■■□□□ 1
LITAF-209ENST00000571688 DUOX2Q9NRD8 1548 aa21.3■■□□□ 1
LITAF-209ENST00000571688 NCOA3Q9Y6Q9 1424 aa21.3■■□□□ 1
LITAF-209ENST00000571688 TNNQ9UQP3 1299 aa21.29■■□□□ 1
LITAF-209ENST00000571688 TTC37Q6PGP7 1564 aa21.28■■□□□ 1
LITAF-209ENST00000571688 POLR3AO14802 1390 aaPredicted RBP21.28■■□□□ 1
LITAF-209ENST00000571688 SHPRHQ149N8 1683 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms