RNA–Protein interactions for RNA: ENST00000570279.1

CFDP1-210, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-210ENST00000570279 WBP1LQ9NX94 342 aa6.68□□□□□ -1.34
CFDP1-210ENST00000570279 TSR3Q9UJK0 312 aaKnown RBP6.68□□□□□ -1.34
CFDP1-210ENST00000570279 MYO15BQ96JP2 1530 aa6.67□□□□□ -1.34
CFDP1-210ENST00000570279 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.67□□□□□ -1.34
CFDP1-210ENST00000570279 SLC4A3P48751 1232 aa6.67□□□□□ -1.34
CFDP1-210ENST00000570279 SLF2Q8IX21 1173 aa6.67□□□□□ -1.34
CFDP1-210ENST00000570279 ZC3H15Q8WU90 426 aaKnown RBP6.67□□□□□ -1.34
CFDP1-210ENST00000570279 TMEM134Q9H6X4 195 aa6.67□□□□□ -1.34
CFDP1-210ENST00000570279 PPP4CP60510 307 aa6.66□□□□□ -1.34
CFDP1-210ENST00000570279 NYAP1Q6ZVC0 841 aa6.66□□□□□ -1.34
CFDP1-210ENST00000570279 MINK1Q8N4C8 1332 aaPredicted RBP6.66□□□□□ -1.34
CFDP1-210ENST00000570279 IRF6O14896 467 aa6.65□□□□□ -1.34
CFDP1-210ENST00000570279 ZMYND10O75800 440 aa6.65□□□□□ -1.34
CFDP1-210ENST00000570279 NLRP7Q8WX94 980 aa6.64□□□□□ -1.35
CFDP1-210ENST00000570279 NECTIN2Q92692 538 aa6.64□□□□□ -1.35
CFDP1-210ENST00000570279 CCDC102AQ96A19 550 aa6.64□□□□□ -1.35
CFDP1-210ENST00000570279 PHOX2BQ99453 314 aa6.64□□□□□ -1.35
CFDP1-210ENST00000570279 BARGINQ6ZT62 677 aa6.63□□□□□ -1.35
CFDP1-210ENST00000570279 KRI1Q8N9T8 703 aaKnown RBP6.63□□□□□ -1.35
CFDP1-210ENST00000570279 PLA2G2EQ9NZK7 142 aa6.62□□□□□ -1.35
CFDP1-210ENST00000570279 DAXXQ9UER7 740 aaPredicted RBP6.61□□□□□ -1.35
CFDP1-210ENST00000570279 APLP1P51693 650 aa6.6□□□□□ -1.35
CFDP1-210ENST00000570279 SLC10A3P09131 477 aa6.59□□□□□ -1.35
CFDP1-210ENST00000570279 PRR14Q9BWN1 585 aa6.59□□□□□ -1.35
CFDP1-210ENST00000570279 DDX11L8A8MPP1 907 aa6.58□□□□□ -1.36
CFDP1-210ENST00000570279 ITGBL1O95965 494 aaPredicted RBP6.58□□□□□ -1.36
CFDP1-210ENST00000570279 CFHP08603 1231 aa6.58□□□□□ -1.36
CFDP1-210ENST00000570279 MDM2Q00987 491 aaPredicted RBP6.58□□□□□ -1.36
CFDP1-210ENST00000570279 RSPH4AQ5TD94 716 aa6.58□□□□□ -1.36
CFDP1-210ENST00000570279 SULF1Q8IWU6 871 aa6.58□□□□□ -1.36
CFDP1-210ENST00000570279 RDH13Q8NBN7 331 aa6.58□□□□□ -1.36
CFDP1-210ENST00000570279 KMT5BQ4FZB7 885 aa6.57□□□□□ -1.36
CFDP1-210ENST00000570279 CLCN1P35523 988 aa6.56□□□□□ -1.36
CFDP1-210ENST00000570279 GPCPD1Q9NPB8 672 aa6.56□□□□□ -1.36
CFDP1-210ENST00000570279 KCNC4Q03721 635 aa6.55□□□□□ -1.36
CFDP1-210ENST00000570279 TJAP1Q5JTD0 557 aa6.55□□□□□ -1.36
CFDP1-210ENST00000570279 IFFO2Q5TF58 517 aa6.55□□□□□ -1.36
CFDP1-210ENST00000570279 AK7Q96M32 723 aa6.55□□□□□ -1.36
CFDP1-210ENST00000570279 MTRQ99707 1265 aa6.55□□□□□ -1.36
CFDP1-210ENST00000570279 PCDHB3Q9Y5E6 796 aa6.55□□□□□ -1.36
CFDP1-210ENST00000570279 ACTN4O43707 911 aaKnown RBP6.54□□□□□ -1.36
CFDP1-210ENST00000570279 ZEB1P37275 1124 aaPredicted RBP6.54□□□□□ -1.36
CFDP1-210ENST00000570279 COPS2P61201 443 aa6.54□□□□□ -1.36
CFDP1-210ENST00000570279 TRIM26Q12899 539 aaPredicted RBP6.54□□□□□ -1.36
CFDP1-210ENST00000570279 TTLL12Q14166 644 aaPredicted RBP6.54□□□□□ -1.36
CFDP1-210ENST00000570279 AMHR2Q16671 573 aa6.54□□□□□ -1.36
CFDP1-210ENST00000570279 IL21Q9HBE4 155 aa6.54□□□□□ -1.36
CFDP1-210ENST00000570279 SLC24A3Q9HC58 644 aa6.54□□□□□ -1.36
CFDP1-210ENST00000570279 ABCC9O60706 1549 aa6.54□□□□□ -1.36
CFDP1-210ENST00000570279 TRIM66O15016 1216 aa6.53□□□□□ -1.36
CFDP1-210ENST00000570279 PCGF6Q9BYE7 350 aa6.53□□□□□ -1.36
CFDP1-210ENST00000570279 CD46P15529 392 aa6.52□□□□□ -1.37
CFDP1-210ENST00000570279 GCGRP47871 477 aa6.52□□□□□ -1.37
CFDP1-210ENST00000570279 BLOC1S3Q6QNY0 202 aa6.52□□□□□ -1.37
CFDP1-210ENST00000570279 TMUB1Q9BVT8 246 aa6.52□□□□□ -1.37
CFDP1-210ENST00000570279 REPIN1Q9BWE0 567 aaKnown RBP6.52□□□□□ -1.37
CFDP1-210ENST00000570279 FAM217BQ9NTX9 383 aaPredicted RBP6.52□□□□□ -1.37
CFDP1-210ENST00000570279 ZNF516Q92618 1163 aa6.51□□□□□ -1.37
CFDP1-210ENST00000570279 RSF1Q96T23 1441 aaPredicted RBP6.5□□□□□ -1.37
CFDP1-210ENST00000570279 ZPR1O75312 459 aa6.5□□□□□ -1.37
CFDP1-210ENST00000570279 FUT2Q10981 343 aa6.5□□□□□ -1.37
CFDP1-210ENST00000570279 PUS10Q3MIT2 529 aaKnown RBP6.5□□□□□ -1.37
CFDP1-210ENST00000570279 GIGYF2Q6Y7W6 1299 aaKnown RBP6.5□□□□□ -1.37
CFDP1-210ENST00000570279 A0A0G2JS52 829 aa6.49□□□□□ -1.37
CFDP1-210ENST00000570279 SSTR3P32745 418 aaPredicted RBP6.49□□□□□ -1.37
CFDP1-210ENST00000570279 PARP9Q8IXQ6 854 aa6.49□□□□□ -1.37
CFDP1-210ENST00000570279 NR1I2O75469 434 aa6.48□□□□□ -1.37
CFDP1-210ENST00000570279 ATP6V1AP38606 617 aa6.48□□□□□ -1.37
CFDP1-210ENST00000570279 PDE4DQ08499 809 aa6.48□□□□□ -1.37
CFDP1-210ENST00000570279 TLL1O43897 1013 aa6.47□□□□□ -1.37
CFDP1-210ENST00000570279 KDM4AO75164 1064 aa6.47□□□□□ -1.37
CFDP1-210ENST00000570279 NKX2-3Q8TAU0 364 aa6.47□□□□□ -1.37
CFDP1-210ENST00000570279 GRIPAP1Q4V328 841 aa6.46□□□□□ -1.38
CFDP1-210ENST00000570279 MORN1Q5T089 497 aa6.46□□□□□ -1.38
CFDP1-210ENST00000570279 SCUBE3Q8IX30 993 aa6.46□□□□□ -1.38
CFDP1-210ENST00000570279 RB1CC1Q8TDY2 1594 aa6.46□□□□□ -1.38
CFDP1-210ENST00000570279 USP46P62068 366 aa6.45□□□□□ -1.38
CFDP1-210ENST00000570279 NUTM1Q86Y26 1132 aa6.45□□□□□ -1.38
CFDP1-210ENST00000570279 NACADO15069 1562 aa6.44□□□□□ -1.38
CFDP1-210ENST00000570279 HOXA2O43364 376 aa6.44□□□□□ -1.38
CFDP1-210ENST00000570279 MS4A1P11836 297 aa6.44□□□□□ -1.38
CFDP1-210ENST00000570279 TPRNQ4KMQ1 711 aa6.44□□□□□ -1.38
CFDP1-210ENST00000570279 SLC27A5Q9Y2P5 690 aa6.44□□□□□ -1.38
CFDP1-210ENST00000570279 LOC105371045A0A1W2PR82 267 aa6.43□□□□□ -1.38
CFDP1-210ENST00000570279 ADH1BP00325 375 aa6.43□□□□□ -1.38
CFDP1-210ENST00000570279 PPP1R18Q6NYC8 613 aa6.43□□□□□ -1.38
CFDP1-210ENST00000570279 SPSB2Q99619 263 aa6.43□□□□□ -1.38
CFDP1-210ENST00000570279 BEGAINQ9BUH8 593 aa6.43□□□□□ -1.38
CFDP1-210ENST00000570279 GGCXP38435 758 aa6.42□□□□□ -1.38
CFDP1-210ENST00000570279 HLA-CQ95604 372 aa6.42□□□□□ -1.38
CFDP1-210ENST00000570279 FMNL1O95466 1100 aaPredicted RBP6.41□□□□□ -1.38
CFDP1-210ENST00000570279 GUCA2AQ02747 115 aa6.41□□□□□ -1.38
CFDP1-210ENST00000570279 Q3C1V9 767 aa6.41□□□□□ -1.38
CFDP1-210ENST00000570279 RNF19BQ6ZMZ0 732 aa6.41□□□□□ -1.38
CFDP1-210ENST00000570279 SPIRE2Q8WWL2 714 aa6.41□□□□□ -1.38
CFDP1-210ENST00000570279 THAP11Q96EK4 314 aa6.41□□□□□ -1.38
CFDP1-210ENST00000570279 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.41□□□□□ -1.38
CFDP1-210ENST00000570279 SALL2Q9Y467 1007 aaPredicted RBP6.41□□□□□ -1.38
CFDP1-210ENST00000570279 RGS20O76081 388 aa6.4□□□□□ -1.38
CFDP1-210ENST00000570279 S1PR4O95977 384 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms