RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.18■■■■□ 3.06
RBFOX1-219ENST00000569895 RIMS2Q9UQ26 1411 aa34.15■■■■□ 3.06
RBFOX1-219ENST00000569895 E9PCH4 1651 aa34.14■■■■□ 3.06
RBFOX1-219ENST00000569895 ZFYVE9O95405 1425 aa34.13■■■■□ 3.05
RBFOX1-219ENST00000569895 PLEKHG1Q9ULL1 1385 aa34.12■■■■□ 3.05
RBFOX1-219ENST00000569895 PROSER2Q86WR7 435 aaPredicted RBP34.12■■■■□ 3.05
RBFOX1-219ENST00000569895 TMEM131LA2VDJ0 1609 aa34.11■■■■□ 3.05
RBFOX1-219ENST00000569895 ALKQ9UM73 1620 aa34.09■■■■□ 3.05
RBFOX1-219ENST00000569895 ILDR2Q71H61 639 aa34.08■■■■□ 3.05
RBFOX1-219ENST00000569895 TMEM94Q12767 1356 aa34.07■■■■□ 3.04
RBFOX1-219ENST00000569895 SENP3Q9H4L4 574 aaPredicted RBP34.06■■■■□ 3.04
RBFOX1-219ENST00000569895 TBX22Q9Y458 520 aa34.06■■■■□ 3.04
RBFOX1-219ENST00000569895 NKTRP30414 1462 aaKnown RBP34.01■■■■□ 3.03
RBFOX1-219ENST00000569895 MYO5BQ9ULV0 1848 aa34■■■■□ 3.03
RBFOX1-219ENST00000569895 NAIPQ13075 1403 aa34■■■■□ 3.03
RBFOX1-219ENST00000569895 NUTM2DQ5VT03 806 aaPredicted RBP34■■■■□ 3.03
RBFOX1-219ENST00000569895 RBM33Q96EV2 1170 aaKnown RBP33.96■■■■□ 3.03
RBFOX1-219ENST00000569895 NWD1Q149M9 1564 aa33.95■■■■□ 3.03
RBFOX1-219ENST00000569895 TRIM52Q96A61 297 aa33.95■■■■□ 3.03
RBFOX1-219ENST00000569895 XIRP1Q702N8 1843 aaKnown RBP33.95■■■■□ 3.02
RBFOX1-219ENST00000569895 ZNF326Q5BKZ1 582 aaKnown RBP33.93■■■■□ 3.02
RBFOX1-219ENST00000569895 MSH6P52701 1360 aa33.93■■■■□ 3.02
RBFOX1-219ENST00000569895 FAM135BQ49AJ0 1406 aa33.93■■■■□ 3.02
RBFOX1-219ENST00000569895 HFM1A2PYH4 1435 aa33.91■■■■□ 3.02
RBFOX1-219ENST00000569895 SOCS7O14512 581 aa33.91■■■■□ 3.02
RBFOX1-219ENST00000569895 PIK3R4Q99570 1358 aa33.9■■■■□ 3.02
RBFOX1-219ENST00000569895 ADAMTS13Q76LX8 1427 aa33.88■■■■□ 3.01
RBFOX1-219ENST00000569895 SPHKAPQ2M3C7 1700 aa33.87■■■■□ 3.01
RBFOX1-219ENST00000569895 DIP2AQ14689 1571 aa33.86■■■■□ 3.01
RBFOX1-219ENST00000569895 MED1Q15648 1581 aaPredicted RBP33.86■■■■□ 3.01
RBFOX1-219ENST00000569895 NCOA3Q9Y6Q9 1424 aa33.86■■■■□ 3.01
RBFOX1-219ENST00000569895 CHD2O14647 1828 aaKnown RBP33.85■■■■□ 3.01
RBFOX1-219ENST00000569895 C14orf37Q86TY3 774 aa33.84■■■■□ 3.01
RBFOX1-219ENST00000569895 PHF23Q9BUL5 403 aaPredicted RBP33.83■■■■□ 3.01
RBFOX1-219ENST00000569895 SLC4A1APQ9BWU0 796 aaKnown RBP33.83■■■■□ 3.01
RBFOX1-219ENST00000569895 SLAIN2Q9P270 581 aa33.83■■■■□ 3.01
RBFOX1-219ENST00000569895 AMOTL2Q9Y2J4 779 aa33.8■■■■□ 3
RBFOX1-219ENST00000569895 TRPM2O94759 1503 aa33.79■■■■□ 3
RBFOX1-219ENST00000569895 C19orf44Q9H6X5 657 aa33.76■■■□□ 2.99
RBFOX1-219ENST00000569895 CADPS2Q86UW7 1296 aa33.74■■■□□ 2.99
RBFOX1-219ENST00000569895 ATF3P18847 181 aa33.73■■■□□ 2.99
RBFOX1-219ENST00000569895 CLTCL1P53675 1640 aa33.71■■■□□ 2.99
RBFOX1-219ENST00000569895 ROBO1Q9Y6N7 1651 aa33.71■■■□□ 2.99
RBFOX1-219ENST00000569895 SETBP1Q9Y6X0 1596 aa33.7■■■□□ 2.99
RBFOX1-219ENST00000569895 VGFO15240 615 aaPredicted RBP33.7■■■□□ 2.99
RBFOX1-219ENST00000569895 PTPRUQ92729 1446 aa33.68■■■□□ 2.98
RBFOX1-219ENST00000569895 RPGRIP1LQ68CZ1 1315 aa33.67■■■□□ 2.98
RBFOX1-219ENST00000569895 ACIN1Q9UKV3 1341 aaKnown RBP33.65■■■□□ 2.98
RBFOX1-219ENST00000569895 NEXMIFQ5QGS0 1516 aa33.64■■■□□ 2.98
RBFOX1-219ENST00000569895 KIF1BO60333 1816 aa33.64■■■□□ 2.98
RBFOX1-219ENST00000569895 METP08581 1390 aa33.63■■■□□ 2.97
RBFOX1-219ENST00000569895 NRXN3Q9Y4C0 1643 aa33.62■■■□□ 2.97
RBFOX1-219ENST00000569895 MPHOSPH9Q99550 1183 aa33.58■■■□□ 2.97
RBFOX1-219ENST00000569895 FOXD1Q16676 465 aa33.57■■■□□ 2.96
RBFOX1-219ENST00000569895 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.56■■■□□ 2.96
RBFOX1-219ENST00000569895 DCCP43146 1447 aa33.54■■■□□ 2.96
RBFOX1-219ENST00000569895 JCADQ9P266 1359 aa33.54■■■□□ 2.96
RBFOX1-219ENST00000569895 XRN1Q8IZH2 1706 aaKnown RBP33.53■■■□□ 2.96
RBFOX1-219ENST00000569895 CCDC144AA2RUR9 1427 aa33.52■■■□□ 2.96
RBFOX1-219ENST00000569895 PHLPP1O60346 1717 aa33.51■■■□□ 2.96
RBFOX1-219ENST00000569895 BRINP3Q76B58 766 aa33.47■■■□□ 2.95
RBFOX1-219ENST00000569895 RGS17Q9UGC6 210 aaPredicted RBP33.47■■■□□ 2.95
RBFOX1-219ENST00000569895 SETD5Q9C0A6 1442 aa33.46■■■□□ 2.95
RBFOX1-219ENST00000569895 RGL3Q3MIN7 710 aa33.45■■■□□ 2.95
RBFOX1-219ENST00000569895 ADGRL3Q9HAR2 1447 aa33.43■■■□□ 2.94
RBFOX1-219ENST00000569895 SPATA31A6Q5VVP1 1343 aa33.41■■■□□ 2.94
RBFOX1-219ENST00000569895 COL16A1Q07092 1604 aaPredicted RBP33.39■■■□□ 2.94
RBFOX1-219ENST00000569895 AHDC1Q5TGY3 1603 aaPredicted RBP33.39■■■□□ 2.94
RBFOX1-219ENST00000569895 MST1RQ04912 1400 aa33.39■■■□□ 2.94
RBFOX1-219ENST00000569895 PTCH1Q13635 1447 aa33.39■■■□□ 2.94
RBFOX1-219ENST00000569895 ANKRD30BQ9BXX2 1392 aa33.39■■■□□ 2.94
RBFOX1-219ENST00000569895 PPLO60437 1756 aa33.37■■■□□ 2.93
RBFOX1-219ENST00000569895 SPATA31E1Q6ZUB1 1445 aa33.36■■■□□ 2.93
RBFOX1-219ENST00000569895 ADGRF5Q8IZF2 1346 aa33.35■■■□□ 2.93
RBFOX1-219ENST00000569895 ROBO2Q9HCK4 1378 aa33.34■■■□□ 2.93
RBFOX1-219ENST00000569895 ASXL1Q8IXJ9 1541 aa33.33■■■□□ 2.93
RBFOX1-219ENST00000569895 MEX3CQ5U5Q3 659 aaKnown RBP33.32■■■□□ 2.92
RBFOX1-219ENST00000569895 PRAG1Q86YV5 1406 aa33.32■■■□□ 2.92
RBFOX1-219ENST00000569895 POTEAQ6S8J7 498 aa33.31■■■□□ 2.92
RBFOX1-219ENST00000569895 LRRC59Q96AG4 307 aaKnown RBP33.31■■■□□ 2.92
RBFOX1-219ENST00000569895 RAB3GAP2Q9H2M9 1393 aa33.3■■■□□ 2.92
RBFOX1-219ENST00000569895 SETD1AO15047 1707 aaKnown RBP33.3■■■□□ 2.92
RBFOX1-219ENST00000569895 NALCNQ8IZF0 1738 aa33.25■■■□□ 2.91
RBFOX1-219ENST00000569895 C1orf167Q5SNV9 1468 aa33.25■■■□□ 2.91
RBFOX1-219ENST00000569895 STK26Q9P289 416 aa33.23■■■□□ 2.91
RBFOX1-219ENST00000569895 SHPRHQ149N8 1683 aa33.22■■■□□ 2.91
RBFOX1-219ENST00000569895 NUTM2BA6NNL0 878 aaPredicted RBP33.21■■■□□ 2.91
RBFOX1-219ENST00000569895 NUTM2EB1AL46 878 aaPredicted RBP33.21■■■□□ 2.91
RBFOX1-219ENST00000569895 ZNF772Q68DY9 489 aaPredicted RBP33.21■■■□□ 2.91
RBFOX1-219ENST00000569895 NUTM2AQ8IVF1 878 aaPredicted RBP33.21■■■□□ 2.91
RBFOX1-219ENST00000569895 LRPPRCP42704 1394 aaKnown RBP33.2■■■□□ 2.9
RBFOX1-219ENST00000569895 DDX17Q92841 729 aaKnown RBP33.19■■■□□ 2.9
RBFOX1-219ENST00000569895 LRP6O75581 1613 aa33.19■■■□□ 2.9
RBFOX1-219ENST00000569895 PIK3C2GO75747 1445 aa33.19■■■□□ 2.9
RBFOX1-219ENST00000569895 HRCP23327 699 aa33.18■■■□□ 2.9
RBFOX1-219ENST00000569895 TMEM132EQ6IEE7 984 aa33.18■■■□□ 2.9
RBFOX1-219ENST00000569895 ABCC11Q96J66 1382 aa33.18■■■□□ 2.9
RBFOX1-219ENST00000569895 NHSL1Q5SYE7 1610 aa33.17■■■□□ 2.9
RBFOX1-219ENST00000569895 ORAI2Q96SN7 254 aa33.17■■■□□ 2.9
RBFOX1-219ENST00000569895 TECPR2O15040 1411 aa33.15■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms