RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 ZDHHC16Q969W1 377 aa10.56□□□□□ -0.72
LINC00556-201ENST00000569603 ASXL2Q76L83 1435 aa10.56□□□□□ -0.72
LINC00556-201ENST00000569603 BHMG1C9JSJ3 638 aaPredicted RBP10.55□□□□□ -0.72
LINC00556-201ENST00000569603 MAP3K9P80192 1104 aa10.55□□□□□ -0.72
LINC00556-201ENST00000569603 TSPOAP1O95153 1857 aa10.55□□□□□ -0.72
LINC00556-201ENST00000569603 PLB1Q6P1J6 1458 aa10.55□□□□□ -0.72
LINC00556-201ENST00000569603 CTTNBP2Q8WZ74 1663 aa10.53□□□□□ -0.72
LINC00556-201ENST00000569603 KDM6BO15054 1643 aa10.53□□□□□ -0.72
LINC00556-201ENST00000569603 ZCCHC11Q5TAX3 1644 aaKnown RBP10.52□□□□□ -0.73
LINC00556-201ENST00000569603 MAP3K4Q9Y6R4 1608 aa10.52□□□□□ -0.73
LINC00556-201ENST00000569603 PTPN5P54829 565 aa10.52□□□□□ -0.73
LINC00556-201ENST00000569603 EPRSP07814 1512 aaKnown RBP10.52□□□□□ -0.73
LINC00556-201ENST00000569603 PCDHGA10Q9Y5H3 936 aa10.51□□□□□ -0.73
LINC00556-201ENST00000569603 COL17A1Q9UMD9 1497 aaPredicted RBP10.5□□□□□ -0.73
LINC00556-201ENST00000569603 ABCA8O94911 1581 aa10.5□□□□□ -0.73
LINC00556-201ENST00000569603 THSD4Q6ZMP0 1018 aa10.49□□□□□ -0.73
LINC00556-201ENST00000569603 COL9A1P20849 921 aa10.47□□□□□ -0.73
LINC00556-201ENST00000569603 MRPL50Q8N5N7 158 aaKnown RBP10.47□□□□□ -0.73
LINC00556-201ENST00000569603 PPP1R3GB7ZBB8 358 aa10.46□□□□□ -0.73
LINC00556-201ENST00000569603 CAMK2BQ13554 666 aa10.46□□□□□ -0.73
LINC00556-201ENST00000569603 PROX2Q3B8N5 592 aa10.46□□□□□ -0.73
LINC00556-201ENST00000569603 GOLGA3Q08378 1498 aa10.46□□□□□ -0.74
LINC00556-201ENST00000569603 WDR7Q9Y4E6 1490 aa10.46□□□□□ -0.74
LINC00556-201ENST00000569603 TTBK1Q5TCY1 1321 aaPredicted RBP10.45□□□□□ -0.74
LINC00556-201ENST00000569603 WNT2BQ93097 391 aa10.45□□□□□ -0.74
LINC00556-201ENST00000569603 NBPF3Q9H094 633 aa10.44□□□□□ -0.74
LINC00556-201ENST00000569603 SAMD9Q5K651 1589 aa10.43□□□□□ -0.74
LINC00556-201ENST00000569603 GOLGA8CPA6NN73 597 aa10.43□□□□□ -0.74
LINC00556-201ENST00000569603 DPYSL4O14531 572 aa10.43□□□□□ -0.74
LINC00556-201ENST00000569603 PHF14O94880 888 aa10.43□□□□□ -0.74
LINC00556-201ENST00000569603 TYW1BQ6NUM6 668 aa10.43□□□□□ -0.74
LINC00556-201ENST00000569603 MAGI3Q5TCQ9 1506 aa10.42□□□□□ -0.74
LINC00556-201ENST00000569603 TEX14Q8IWB6 1497 aa10.41□□□□□ -0.74
LINC00556-201ENST00000569603 CFAP43Q8NDM7 1665 aa10.41□□□□□ -0.74
LINC00556-201ENST00000569603 FBXW7Q969H0 707 aa10.4□□□□□ -0.74
LINC00556-201ENST00000569603 RTN4Q9NQC3 1192 aaKnown RBP10.4□□□□□ -0.74
LINC00556-201ENST00000569603 RABGEF1Q9UJ41 708 aa10.4□□□□□ -0.74
LINC00556-201ENST00000569603 ATP10BO94823 1461 aa10.38□□□□□ -0.75
LINC00556-201ENST00000569603 AMER1Q5JTC6 1135 aaPredicted RBP10.37□□□□□ -0.75
LINC00556-201ENST00000569603 BBXQ8WY36 941 aaPredicted RBP10.37□□□□□ -0.75
LINC00556-201ENST00000569603 ADGRL1O94910 1474 aa10.36□□□□□ -0.75
LINC00556-201ENST00000569603 EEA1Q15075 1411 aa10.36□□□□□ -0.75
LINC00556-201ENST00000569603 CD109Q6YHK3 1445 aa10.36□□□□□ -0.75
LINC00556-201ENST00000569603 ABCA9Q8IUA7 1624 aa10.36□□□□□ -0.75
LINC00556-201ENST00000569603 C6orf132Q5T0Z8 1188 aa10.35□□□□□ -0.75
LINC00556-201ENST00000569603 DDX12PQ92771 950 aa10.35□□□□□ -0.75
LINC00556-201ENST00000569603 EPAS1Q99814 870 aa10.35□□□□□ -0.75
LINC00556-201ENST00000569603 ARAP3Q8WWN8 1544 aa10.34□□□□□ -0.75
LINC00556-201ENST00000569603 RAPGEF6Q8TEU7 1601 aa10.34□□□□□ -0.75
LINC00556-201ENST00000569603 BCAMP50895 628 aa10.34□□□□□ -0.75
LINC00556-201ENST00000569603 IFFO2Q5TF58 517 aa10.34□□□□□ -0.75
LINC00556-201ENST00000569603 ANKK1Q8NFD2 765 aa10.34□□□□□ -0.75
LINC00556-201ENST00000569603 RBM33Q96EV2 1170 aaKnown RBP10.34□□□□□ -0.75
LINC00556-201ENST00000569603 KIAA1468Q9P260 1216 aa10.34□□□□□ -0.75
LINC00556-201ENST00000569603 NUP153P49790 1475 aaKnown RBP10.34□□□□□ -0.75
LINC00556-201ENST00000569603 SEPT9Q9UHD8 586 aaPredicted RBP10.33□□□□□ -0.76
LINC00556-201ENST00000569603 KIF21BO75037 1637 aa10.33□□□□□ -0.76
LINC00556-201ENST00000569603 A0A0G2JS52 829 aa10.31□□□□□ -0.76
LINC00556-201ENST00000569603 LAPTM4BQ86VI4 370 aa10.3□□□□□ -0.76
LINC00556-201ENST00000569603 ZFRQ96KR1 1074 aaKnown RBP10.3□□□□□ -0.76
LINC00556-201ENST00000569603 SOWAHBA6NEL2 793 aa10.29□□□□□ -0.76
LINC00556-201ENST00000569603 TRIM6-TRIM34B2RNG4 842 aa10.29□□□□□ -0.76
LINC00556-201ENST00000569603 RGS20O76081 388 aa10.29□□□□□ -0.76
LINC00556-201ENST00000569603 PDIA6Q15084 440 aa10.29□□□□□ -0.76
LINC00556-201ENST00000569603 P3H3Q8IVL6 736 aa10.29□□□□□ -0.76
LINC00556-201ENST00000569603 FHOD3Q2V2M9 1422 aa10.29□□□□□ -0.76
LINC00556-201ENST00000569603 FRMPD1Q5SYB0 1578 aa10.29□□□□□ -0.76
LINC00556-201ENST00000569603 EFCAB5A4FU69 1503 aa10.28□□□□□ -0.76
LINC00556-201ENST00000569603 NBR1Q14596 966 aa10.28□□□□□ -0.76
LINC00556-201ENST00000569603 TSR1Q2NL82 804 aaKnown RBP10.28□□□□□ -0.76
LINC00556-201ENST00000569603 PHLDB1Q86UU1 1377 aa10.27□□□□□ -0.76
LINC00556-201ENST00000569603 ONECUT3O60422 494 aaPredicted RBP10.27□□□□□ -0.77
LINC00556-201ENST00000569603 EN1Q05925 392 aaPredicted RBP10.27□□□□□ -0.77
LINC00556-201ENST00000569603 SPRYD3Q8NCJ5 442 aa10.27□□□□□ -0.77
LINC00556-201ENST00000569603 NEO1Q92859 1461 aa10.27□□□□□ -0.77
LINC00556-201ENST00000569603 ARID3CA6NKF2 412 aa10.25□□□□□ -0.77
LINC00556-201ENST00000569603 ITGBL1O95965 494 aaPredicted RBP10.25□□□□□ -0.77
LINC00556-201ENST00000569603 WBP1LQ9NX94 342 aa10.25□□□□□ -0.77
LINC00556-201ENST00000569603 MAP3K7O43318 606 aa10.24□□□□□ -0.77
LINC00556-201ENST00000569603 PRIM1P49642 420 aaKnown RBP10.24□□□□□ -0.77
LINC00556-201ENST00000569603 FAM98CQ17RN3 349 aaKnown RBP10.24□□□□□ -0.77
LINC00556-201ENST00000569603 TSKSQ9UJT2 592 aa10.24□□□□□ -0.77
LINC00556-201ENST00000569603 ADAMTSL3P82987 1691 aa10.24□□□□□ -0.77
LINC00556-201ENST00000569603 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.23□□□□□ -0.77
LINC00556-201ENST00000569603 HECW2Q9P2P5 1572 aa10.23□□□□□ -0.77
LINC00556-201ENST00000569603 RICTORQ6R327 1708 aa10.23□□□□□ -0.77
LINC00556-201ENST00000569603 TTC37Q6PGP7 1564 aa10.22□□□□□ -0.77
LINC00556-201ENST00000569603 IRX2Q9BZI1 471 aaPredicted RBP10.22□□□□□ -0.77
LINC00556-201ENST00000569603 SPDYE16A6NNV3 312 aaPredicted RBP10.21□□□□□ -0.77
LINC00556-201ENST00000569603 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.21□□□□□ -0.77
LINC00556-201ENST00000569603 ARHGAP35Q9NRY4 1499 aa10.21□□□□□ -0.78
LINC00556-201ENST00000569603 RAPGEF3O95398 923 aa10.2□□□□□ -0.78
LINC00556-201ENST00000569603 CDK13Q14004 1512 aaKnown RBP10.2□□□□□ -0.78
LINC00556-201ENST00000569603 E2F4Q16254 413 aa10.2□□□□□ -0.78
LINC00556-201ENST00000569603 ZMYM4Q5VZL5 1548 aa10.2□□□□□ -0.78
LINC00556-201ENST00000569603 ARHGEF40Q8TER5 1519 aa10.2□□□□□ -0.78
LINC00556-201ENST00000569603 FAM198AQ9UFP1 575 aa10.2□□□□□ -0.78
LINC00556-201ENST00000569603 SIGLEC1Q9BZZ2 1709 aa10.19□□□□□ -0.78
LINC00556-201ENST00000569603 MYT1Q01538 1121 aa10.19□□□□□ -0.78
LINC00556-201ENST00000569603 PAXIP1Q6ZW49 1069 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms