RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 MYO5BQ9ULV0 1848 aa33.86■■■■□ 3.01
RAB40C-212ENST00000569575 EID1Q9Y6B2 187 aa33.86■■■■□ 3.01
RAB40C-212ENST00000569575 VGFO15240 615 aaPredicted RBP33.85■■■■□ 3.01
RAB40C-212ENST00000569575 RGL3Q3MIN7 710 aa33.85■■■■□ 3.01
RAB40C-212ENST00000569575 ZFYVE9O95405 1425 aa33.85■■■■□ 3.01
RAB40C-212ENST00000569575 ANKLE2Q86XL3 938 aa33.82■■■■□ 3
RAB40C-212ENST00000569575 RIMS2Q9UQ26 1411 aa33.81■■■■□ 3
RAB40C-212ENST00000569575 NEXMIFQ5QGS0 1516 aa33.79■■■■□ 3
RAB40C-212ENST00000569575 PPLO60437 1756 aa33.77■■■■□ 3
RAB40C-212ENST00000569575 IFT172Q9UG01 1749 aa33.77■■■■□ 3
RAB40C-212ENST00000569575 L3MBTL2Q969R5 705 aa33.77■■■■□ 3
RAB40C-212ENST00000569575 MYOM2P54296 1465 aa33.76■■■■□ 3
RAB40C-212ENST00000569575 TXNDC2Q86VQ3 553 aa33.76■■■□□ 2.99
RAB40C-212ENST00000569575 DCAF11Q8TEB1 546 aa33.75■■■□□ 2.99
RAB40C-212ENST00000569575 SCAF11Q99590 1463 aaKnown RBP33.74■■■□□ 2.99
RAB40C-212ENST00000569575 PPP1R15AO75807 674 aaPredicted RBP33.72■■■□□ 2.99
RAB40C-212ENST00000569575 MED14O60244 1454 aa33.69■■■□□ 2.98
RAB40C-212ENST00000569575 PLEKHG1Q9ULL1 1385 aa33.69■■■□□ 2.98
RAB40C-212ENST00000569575 LTKP29376 864 aa33.68■■■□□ 2.98
RAB40C-212ENST00000569575 NRXN1Q9ULB1 1477 aa33.68■■■□□ 2.98
RAB40C-212ENST00000569575 ZEB1P37275 1124 aaPredicted RBP33.67■■■□□ 2.98
RAB40C-212ENST00000569575 POLR1AO95602 1720 aaPredicted RBP33.67■■■□□ 2.98
RAB40C-212ENST00000569575 HSPA2P54652 639 aa33.65■■■□□ 2.98
RAB40C-212ENST00000569575 DMRT2Q9Y5R5 561 aa33.64■■■□□ 2.98
RAB40C-212ENST00000569575 KDM2AQ9Y2K7 1162 aa33.62■■■□□ 2.97
RAB40C-212ENST00000569575 PIK3C2GO75747 1445 aa33.6■■■□□ 2.97
RAB40C-212ENST00000569575 SETBP1Q9Y6X0 1596 aa33.6■■■□□ 2.97
RAB40C-212ENST00000569575 ADGRF5Q8IZF2 1346 aa33.59■■■□□ 2.97
RAB40C-212ENST00000569575 NPHP4O75161 1426 aaPredicted RBP33.58■■■□□ 2.97
RAB40C-212ENST00000569575 PRAG1Q86YV5 1406 aa33.58■■■□□ 2.97
RAB40C-212ENST00000569575 DIP2AQ14689 1571 aa33.55■■■□□ 2.96
RAB40C-212ENST00000569575 NCKAP5LQ9HCH0 1330 aa33.55■■■□□ 2.96
RAB40C-212ENST00000569575 LAMC1P11047 1609 aa33.55■■■□□ 2.96
RAB40C-212ENST00000569575 NUTM2DQ5VT03 806 aaPredicted RBP33.55■■■□□ 2.96
RAB40C-212ENST00000569575 TBX22Q9Y458 520 aa33.55■■■□□ 2.96
RAB40C-212ENST00000569575 STRCQ7RTU9 1775 aa33.55■■■□□ 2.96
RAB40C-212ENST00000569575 C14orf93Q9H972 538 aaKnown RBP33.54■■■□□ 2.96
RAB40C-212ENST00000569575 KIAA1210Q9ULL0 1709 aa33.53■■■□□ 2.96
RAB40C-212ENST00000569575 IQGAP1P46940 1657 aa33.53■■■□□ 2.96
RAB40C-212ENST00000569575 BCANQ96GW7 911 aa33.52■■■□□ 2.96
RAB40C-212ENST00000569575 PIK3R4Q99570 1358 aa33.49■■■□□ 2.95
RAB40C-212ENST00000569575 ADAMTS13Q76LX8 1427 aa33.47■■■□□ 2.95
RAB40C-212ENST00000569575 ALKQ9UM73 1620 aa33.46■■■□□ 2.95
RAB40C-212ENST00000569575 NRXN3Q9Y4C0 1643 aa33.46■■■□□ 2.95
RAB40C-212ENST00000569575 NBPF8Q3BBV2 869 aa33.41■■■□□ 2.94
RAB40C-212ENST00000569575 CFAP70Q5T0N1 1121 aa33.4■■■□□ 2.94
RAB40C-212ENST00000569575 TRPM1Q7Z4N2 1603 aa33.39■■■□□ 2.94
RAB40C-212ENST00000569575 RALGAPBQ86X10 1494 aa33.39■■■□□ 2.94
RAB40C-212ENST00000569575 SLC26A8Q96RN1 970 aa33.38■■■□□ 2.93
RAB40C-212ENST00000569575 SETD1AO15047 1707 aaKnown RBP33.38■■■□□ 2.93
RAB40C-212ENST00000569575 GPRASP1Q5JY77 1395 aa33.36■■■□□ 2.93
RAB40C-212ENST00000569575 ROCK2O75116 1388 aaKnown RBP33.34■■■□□ 2.93
RAB40C-212ENST00000569575 ADGRB1O14514 1584 aa33.31■■■□□ 2.92
RAB40C-212ENST00000569575 METP08581 1390 aa33.3■■■□□ 2.92
RAB40C-212ENST00000569575 KCNA6P17658 529 aa33.29■■■□□ 2.92
RAB40C-212ENST00000569575 SIRT1Q96EB6 747 aa33.29■■■□□ 2.92
RAB40C-212ENST00000569575 LRPPRCP42704 1394 aaKnown RBP33.29■■■□□ 2.92
RAB40C-212ENST00000569575 ABCC11Q96J66 1382 aa33.29■■■□□ 2.92
RAB40C-212ENST00000569575 CHD2O14647 1828 aaKnown RBP33.28■■■□□ 2.92
RAB40C-212ENST00000569575 NBPF1Q3BBV0 1214 aa33.27■■■□□ 2.92
RAB40C-212ENST00000569575 YTHDC2Q9H6S0 1430 aaKnown RBP33.27■■■□□ 2.92
RAB40C-212ENST00000569575 TECPR2O15040 1411 aa33.25■■■□□ 2.91
RAB40C-212ENST00000569575 CARD11Q9BXL7 1154 aa33.24■■■□□ 2.91
RAB40C-212ENST00000569575 ASXL1Q8IXJ9 1541 aa33.23■■■□□ 2.91
RAB40C-212ENST00000569575 TMEM132EQ6IEE7 984 aa33.23■■■□□ 2.91
RAB40C-212ENST00000569575 AMOTL2Q9Y2J4 779 aa33.23■■■□□ 2.91
RAB40C-212ENST00000569575 NWD1Q149M9 1564 aa33.22■■■□□ 2.91
RAB40C-212ENST00000569575 SENP3Q9H4L4 574 aaPredicted RBP33.22■■■□□ 2.91
RAB40C-212ENST00000569575 DLC1Q96QB1 1528 aa33.22■■■□□ 2.91
RAB40C-212ENST00000569575 KNDC1Q76NI1 1749 aa33.21■■■□□ 2.91
RAB40C-212ENST00000569575 NKTRP30414 1462 aaKnown RBP33.2■■■□□ 2.91
RAB40C-212ENST00000569575 EIF3AQ14152 1382 aaKnown RBP33.19■■■□□ 2.9
RAB40C-212ENST00000569575 XRN1Q8IZH2 1706 aaKnown RBP33.19■■■□□ 2.9
RAB40C-212ENST00000569575 PTCH1Q13635 1447 aa33.19■■■□□ 2.9
RAB40C-212ENST00000569575 FAM135BQ49AJ0 1406 aa33.19■■■□□ 2.9
RAB40C-212ENST00000569575 PTPRUQ92729 1446 aa33.18■■■□□ 2.9
RAB40C-212ENST00000569575 SLC24A1O60721 1099 aa33.16■■■□□ 2.9
RAB40C-212ENST00000569575 CPS1P31327 1500 aa33.15■■■□□ 2.9
RAB40C-212ENST00000569575 NCOA3Q9Y6Q9 1424 aa33.13■■■□□ 2.89
RAB40C-212ENST00000569575 STK26Q9P289 416 aa33.12■■■□□ 2.89
RAB40C-212ENST00000569575 TRAK1Q9UPV9 953 aa33.11■■■□□ 2.89
RAB40C-212ENST00000569575 EIF4G2P78344 907 aaKnown RBP eCLIP33.08■■■□□ 2.891e-6■■■■□ 25.9
RAB40C-212ENST00000569575 ZNF335Q9H4Z2 1342 aaPredicted RBP33.07■■■□□ 2.88
RAB40C-212ENST00000569575 USP47Q96K76 1375 aa33.06■■■□□ 2.88
RAB40C-212ENST00000569575 ARHGEF28Q8N1W1 1705 aaKnown RBP33.05■■■□□ 2.88
RAB40C-212ENST00000569575 POGKQ9P215 609 aa33.05■■■□□ 2.88
RAB40C-212ENST00000569575 ROBO2Q9HCK4 1378 aa33.05■■■□□ 2.88
RAB40C-212ENST00000569575 PROSER2Q86WR7 435 aaPredicted RBP33.04■■■□□ 2.88
RAB40C-212ENST00000569575 CENPJQ9HC77 1338 aaPredicted RBP33.03■■■□□ 2.88
RAB40C-212ENST00000569575 STRCP1A6NGW2 1772 aa33.03■■■□□ 2.88
RAB40C-212ENST00000569575 SBNO2Q9Y2G9 1366 aa33.02■■■□□ 2.88
RAB40C-212ENST00000569575 PRAM1Q96QH2 718 aa33.01■■■□□ 2.87
RAB40C-212ENST00000569575 LTBP4Q8N2S1 1624 aa32.99■■■□□ 2.87
RAB40C-212ENST00000569575 LRRC7Q96NW7 1537 aa32.96■■■□□ 2.87
RAB40C-212ENST00000569575 WAPLQ7Z5K2 1190 aa32.95■■■□□ 2.87
RAB40C-212ENST00000569575 ST20-MTHFSA0A0A6YYL1 179 aa32.94■■■□□ 2.86
RAB40C-212ENST00000569575 TMEM94Q12767 1356 aa32.93■■■□□ 2.86
RAB40C-212ENST00000569575 C19orf44Q9H6X5 657 aa32.91■■■□□ 2.86
RAB40C-212ENST00000569575 ADGRL3Q9HAR2 1447 aa32.91■■■□□ 2.86
RAB40C-212ENST00000569575 HSPA5P11021 654 aaKnown RBP32.9■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms