RNA–Protein interactions for RNA: ENST00000569380.5

SPSB3-211, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-211ENST00000569380 CEP170BQ9Y4F5 1589 aaPredicted RBP29.21■■■□□ 2.27
SPSB3-211ENST00000569380 ZNF142P52746 1687 aaPredicted RBP29.2■■■□□ 2.27
SPSB3-211ENST00000569380 NEXMIFQ5QGS0 1516 aa29.19■■■□□ 2.26
SPSB3-211ENST00000569380 UBR1Q8IWV7 1749 aa29.19■■■□□ 2.26
SPSB3-211ENST00000569380 PRAG1Q86YV5 1406 aa29.18■■■□□ 2.26
SPSB3-211ENST00000569380 NLRP1Q9C000 1473 aa29.18■■■□□ 2.26
SPSB3-211ENST00000569380 ADGRF5Q8IZF2 1346 aa29.18■■■□□ 2.26
SPSB3-211ENST00000569380 SENP3Q9H4L4 574 aaPredicted RBP29.16■■■□□ 2.26
SPSB3-211ENST00000569380 ILDR1Q86SU0 546 aaPredicted RBP29.13■■■□□ 2.25
SPSB3-211ENST00000569380 MYOM2P54296 1465 aa29.12■■■□□ 2.25
SPSB3-211ENST00000569380 RPGRIP1LQ68CZ1 1315 aa29.11■■■□□ 2.25
SPSB3-211ENST00000569380 TRPM1Q7Z4N2 1603 aa29.09■■■□□ 2.25
SPSB3-211ENST00000569380 RIMS2Q9UQ26 1411 aa29.09■■■□□ 2.25
SPSB3-211ENST00000569380 KDM5AP29375 1690 aaKnown RBP29.09■■■□□ 2.25
SPSB3-211ENST00000569380 NRXN1Q9ULB1 1477 aa29.06■■■□□ 2.24
SPSB3-211ENST00000569380 NBPF1Q3BBV0 1214 aa29.06■■■□□ 2.24
SPSB3-211ENST00000569380 DMRT2Q9Y5R5 561 aa29.06■■■□□ 2.24
SPSB3-211ENST00000569380 RALGAPBQ86X10 1494 aa29.06■■■□□ 2.24
SPSB3-211ENST00000569380 ZFYVE9O95405 1425 aa29.06■■■□□ 2.24
SPSB3-211ENST00000569380 NCKAP5LQ9HCH0 1330 aa29.05■■■□□ 2.24
SPSB3-211ENST00000569380 TMEM2Q9UHN6 1383 aa29.03■■■□□ 2.24
SPSB3-211ENST00000569380 CFAP70Q5T0N1 1121 aa29.02■■■□□ 2.24
SPSB3-211ENST00000569380 PIK3C2GO75747 1445 aa29.02■■■□□ 2.24
SPSB3-211ENST00000569380 HIRIP3Q9BW71 556 aaPredicted RBP29.01■■■□□ 2.23
SPSB3-211ENST00000569380 VGFO15240 615 aaPredicted RBP29.01■■■□□ 2.23
SPSB3-211ENST00000569380 STAC3Q96MF2 364 aa29■■■□□ 2.23
SPSB3-211ENST00000569380 ROCK2O75116 1388 aaKnown RBP28.99■■■□□ 2.23
SPSB3-211ENST00000569380 LTKP29376 864 aa28.98■■■□□ 2.23
SPSB3-211ENST00000569380 ARHGAP23Q9P227 1491 aa28.96■■■□□ 2.23
SPSB3-211ENST00000569380 THEMISQ8N1K5 641 aaPredicted RBP28.96■■■□□ 2.23
SPSB3-211ENST00000569380 SLIT1O75093 1534 aa28.95■■■□□ 2.23
SPSB3-211ENST00000569380 CARD11Q9BXL7 1154 aa28.95■■■□□ 2.22
SPSB3-211ENST00000569380 KIAA1210Q9ULL0 1709 aa28.93■■■□□ 2.22
SPSB3-211ENST00000569380 TXNDC2Q86VQ3 553 aa28.93■■■□□ 2.22
SPSB3-211ENST00000569380 CERKQ8TCT0 537 aa28.93■■■□□ 2.22
SPSB3-211ENST00000569380 NRXN3Q9Y4C0 1643 aa28.91■■■□□ 2.22
SPSB3-211ENST00000569380 FBXO41Q8TF61 875 aa28.91■■■□□ 2.22
SPSB3-211ENST00000569380 C14orf93Q9H972 538 aaKnown RBP28.91■■■□□ 2.22
SPSB3-211ENST00000569380 GPRASP1Q5JY77 1395 aa28.91■■■□□ 2.22
SPSB3-211ENST00000569380 HSPA5P11021 654 aaKnown RBP28.9■■■□□ 2.22
SPSB3-211ENST00000569380 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.9■■■□□ 2.22
SPSB3-211ENST00000569380 IQGAP1P46940 1657 aa28.9■■■□□ 2.22
SPSB3-211ENST00000569380 TMEM132EQ6IEE7 984 aa28.9■■■□□ 2.22
SPSB3-211ENST00000569380 LTBP4Q8N2S1 1624 aa28.88■■■□□ 2.21
SPSB3-211ENST00000569380 POLR1AO95602 1720 aaPredicted RBP28.88■■■□□ 2.21
SPSB3-211ENST00000569380 ASXL1Q8IXJ9 1541 aa28.87■■■□□ 2.21
SPSB3-211ENST00000569380 ALKQ9UM73 1620 aa28.87■■■□□ 2.21
SPSB3-211ENST00000569380 USP47Q96K76 1375 aa28.87■■■□□ 2.21
SPSB3-211ENST00000569380 ADGRB1O14514 1584 aa28.85■■■□□ 2.21
SPSB3-211ENST00000569380 LAMC1P11047 1609 aa28.85■■■□□ 2.21
SPSB3-211ENST00000569380 SETD1AO15047 1707 aaKnown RBP28.85■■■□□ 2.21
SPSB3-211ENST00000569380 HDGFP51858 240 aaKnown RBP28.85■■■□□ 2.21
SPSB3-211ENST00000569380 EIF4G2P78344 907 aaKnown RBP eCLIP28.85■■■□□ 2.21
SPSB3-211ENST00000569380 EID1Q9Y6B2 187 aa28.85■■■□□ 2.21
SPSB3-211ENST00000569380 ZNF335Q9H4Z2 1342 aaPredicted RBP28.84■■■□□ 2.21
SPSB3-211ENST00000569380 SCAF11Q99590 1463 aaKnown RBP28.84■■■□□ 2.21
SPSB3-211ENST00000569380 ZNF316A6NFI3 1004 aaPredicted RBP28.84■■■□□ 2.21
SPSB3-211ENST00000569380 BCANQ96GW7 911 aa28.84■■■□□ 2.21
SPSB3-211ENST00000569380 SETBP1Q9Y6X0 1596 aa28.83■■■□□ 2.21
SPSB3-211ENST00000569380 PLEKHG1Q9ULL1 1385 aa28.82■■■□□ 2.2
SPSB3-211ENST00000569380 ANKLE2Q86XL3 938 aa28.8■■■□□ 2.2
SPSB3-211ENST00000569380 ADAMTS13Q76LX8 1427 aa28.8■■■□□ 2.2
SPSB3-211ENST00000569380 SLC26A8Q96RN1 970 aa28.78■■■□□ 2.2
SPSB3-211ENST00000569380 ST20-MTHFSA0A0A6YYL1 179 aa28.77■■■□□ 2.2
SPSB3-211ENST00000569380 METP08581 1390 aa28.77■■■□□ 2.2
SPSB3-211ENST00000569380 NPHP4O75161 1426 aaPredicted RBP28.76■■■□□ 2.19
SPSB3-211ENST00000569380 MED14O60244 1454 aa28.76■■■□□ 2.19
SPSB3-211ENST00000569380 STK26Q9P289 416 aa28.75■■■□□ 2.19
SPSB3-211ENST00000569380 TRAK1Q9UPV9 953 aa28.75■■■□□ 2.19
SPSB3-211ENST00000569380 C11orf95C9JLR9 678 aaPredicted RBP28.7■■■□□ 2.19
SPSB3-211ENST00000569380 YTHDC2Q9H6S0 1430 aaKnown RBP28.7■■■□□ 2.18
SPSB3-211ENST00000569380 ARHGEF28Q8N1W1 1705 aaKnown RBP28.68■■■□□ 2.18
SPSB3-211ENST00000569380 PTPRUQ92729 1446 aa28.65■■■□□ 2.18
SPSB3-211ENST00000569380 TESK2Q96S53 571 aa28.64■■■□□ 2.18
SPSB3-211ENST00000569380 TBX22Q9Y458 520 aa28.63■■■□□ 2.17
SPSB3-211ENST00000569380 IQSEC2Q5JU85 1478 aa28.63■■■□□ 2.17
SPSB3-211ENST00000569380 LRPPRCP42704 1394 aaKnown RBP28.63■■■□□ 2.17
SPSB3-211ENST00000569380 DIP2AQ14689 1571 aa28.61■■■□□ 2.17
SPSB3-211ENST00000569380 SAFB2Q14151 953 aaKnown RBP eCLIP28.6■■■□□ 2.17
SPSB3-211ENST00000569380 EIF3AQ14152 1382 aaKnown RBP28.6■■■□□ 2.17
SPSB3-211ENST00000569380 QRICH2Q9H0J4 1663 aa28.59■■■□□ 2.17
SPSB3-211ENST00000569380 WASHC2AQ641Q2 1341 aa28.59■■■□□ 2.17
SPSB3-211ENST00000569380 CENPJQ9HC77 1338 aaPredicted RBP28.57■■■□□ 2.16
SPSB3-211ENST00000569380 PLEKHH1Q9ULM0 1364 aa28.57■■■□□ 2.16
SPSB3-211ENST00000569380 CPS1P31327 1500 aa28.57■■■□□ 2.16
SPSB3-211ENST00000569380 DISP3Q9P2K9 1392 aa28.57■■■□□ 2.16
SPSB3-211ENST00000569380 WAPLQ7Z5K2 1190 aa28.57■■■□□ 2.16
SPSB3-211ENST00000569380 PRAM1Q96QH2 718 aa28.57■■■□□ 2.16
SPSB3-211ENST00000569380 ABCC11Q96J66 1382 aa28.56■■■□□ 2.16
SPSB3-211ENST00000569380 KNDC1Q76NI1 1749 aa28.55■■■□□ 2.16
SPSB3-211ENST00000569380 KIF7Q2M1P5 1343 aa28.55■■■□□ 2.16
SPSB3-211ENST00000569380 AMOTL2Q9Y2J4 779 aa28.54■■■□□ 2.16
SPSB3-211ENST00000569380 STRCP1A6NGW2 1772 aa28.54■■■□□ 2.16
SPSB3-211ENST00000569380 ROBO2Q9HCK4 1378 aa28.53■■■□□ 2.16
SPSB3-211ENST00000569380 POLR3GLQ9BT43 218 aa28.53■■■□□ 2.16
SPSB3-211ENST00000569380 CCDC7Q96M83 1385 aa28.53■■■□□ 2.16
SPSB3-211ENST00000569380 DLC1Q96QB1 1528 aa28.53■■■□□ 2.16
SPSB3-211ENST00000569380 XRN1Q8IZH2 1706 aaKnown RBP28.51■■■□□ 2.15
SPSB3-211ENST00000569380 TECPR2O15040 1411 aa28.51■■■□□ 2.15
SPSB3-211ENST00000569380 CHD2O14647 1828 aaKnown RBP28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms