RNA–Protein interactions for RNA: ENST00000569348.5

NAE1-220, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 4

Gene NAE1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-220ENST00000569348 XIRP1Q702N8 1843 aaKnown RBP30.14■■■□□ 2.42
NAE1-220ENST00000569348 E9PCH4 1651 aa30.14■■■□□ 2.41
NAE1-220ENST00000569348 NUP155O75694 1391 aa30.12■■■□□ 2.41
NAE1-220ENST00000569348 ZFYVE9O95405 1425 aa30.09■■■□□ 2.41
NAE1-220ENST00000569348 KCNA6P17658 529 aa30.09■■■□□ 2.41
NAE1-220ENST00000569348 IQGAP3Q86VI3 1631 aa30.09■■■□□ 2.41
NAE1-220ENST00000569348 RIMS2Q9UQ26 1411 aa30.09■■■□□ 2.41
NAE1-220ENST00000569348 TMEM131LA2VDJ0 1609 aa30.08■■■□□ 2.41
NAE1-220ENST00000569348 NUTM2DQ5VT03 806 aaPredicted RBP30.08■■■□□ 2.41
NAE1-220ENST00000569348 TMEM94Q12767 1356 aa30.07■■■□□ 2.4
NAE1-220ENST00000569348 PPP1R15AO75807 674 aaPredicted RBP30.07■■■□□ 2.4
NAE1-220ENST00000569348 MED1Q15648 1581 aaPredicted RBP30.06■■■□□ 2.4
NAE1-220ENST00000569348 PROSER2Q86WR7 435 aaPredicted RBP30.05■■■□□ 2.4
NAE1-220ENST00000569348 SOCS7O14512 581 aa30.04■■■□□ 2.4
NAE1-220ENST00000569348 PLEKHG1Q9ULL1 1385 aa30.02■■■□□ 2.4
NAE1-220ENST00000569348 HDGFP51858 240 aaKnown RBP29.97■■■□□ 2.39
NAE1-220ENST00000569348 NWD1Q149M9 1564 aa29.97■■■□□ 2.39
NAE1-220ENST00000569348 NKTRP30414 1462 aaKnown RBP29.93■■■□□ 2.38
NAE1-220ENST00000569348 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.93■■■□□ 2.38
NAE1-220ENST00000569348 ADAMTS13Q76LX8 1427 aa29.9■■■□□ 2.38
NAE1-220ENST00000569348 TBX22Q9Y458 520 aa29.9■■■□□ 2.38
NAE1-220ENST00000569348 CHD2O14647 1828 aaKnown RBP29.89■■■□□ 2.38
NAE1-220ENST00000569348 NAIPQ13075 1403 aa29.88■■■□□ 2.37
NAE1-220ENST00000569348 FAM135BQ49AJ0 1406 aa29.88■■■□□ 2.37
NAE1-220ENST00000569348 PHF23Q9BUL5 403 aaPredicted RBP29.87■■■□□ 2.37
NAE1-220ENST00000569348 SPHKAPQ2M3C7 1700 aa29.86■■■□□ 2.37
NAE1-220ENST00000569348 MSH6P52701 1360 aa29.86■■■□□ 2.37
NAE1-220ENST00000569348 ROBO1Q9Y6N7 1651 aa29.85■■■□□ 2.37
NAE1-220ENST00000569348 ZNF326Q5BKZ1 582 aaKnown RBP29.83■■■□□ 2.37
NAE1-220ENST00000569348 C14orf37Q86TY3 774 aa29.79■■■□□ 2.36
NAE1-220ENST00000569348 TRIM52Q96A61 297 aa29.79■■■□□ 2.36
NAE1-220ENST00000569348 SLAIN2Q9P270 581 aa29.79■■■□□ 2.36
NAE1-220ENST00000569348 PTPRUQ92729 1446 aa29.78■■■□□ 2.36
NAE1-220ENST00000569348 DIP2AQ14689 1571 aa29.77■■■□□ 2.36
NAE1-220ENST00000569348 CLTCL1P53675 1640 aa29.77■■■□□ 2.36
NAE1-220ENST00000569348 HFM1A2PYH4 1435 aa29.77■■■□□ 2.36
NAE1-220ENST00000569348 AMOTL2Q9Y2J4 779 aa29.75■■■□□ 2.35
NAE1-220ENST00000569348 TRPM2O94759 1503 aa29.74■■■□□ 2.35
NAE1-220ENST00000569348 NRXN3Q9Y4C0 1643 aa29.74■■■□□ 2.35
NAE1-220ENST00000569348 PIK3R4Q99570 1358 aa29.73■■■□□ 2.35
NAE1-220ENST00000569348 RGS17Q9UGC6 210 aaPredicted RBP29.7■■■□□ 2.35
NAE1-220ENST00000569348 NCOA3Q9Y6Q9 1424 aa29.68■■■□□ 2.34
NAE1-220ENST00000569348 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.68■■■□□ 2.34
NAE1-220ENST00000569348 METP08581 1390 aa29.67■■■□□ 2.34
NAE1-220ENST00000569348 SETBP1Q9Y6X0 1596 aa29.67■■■□□ 2.34
NAE1-220ENST00000569348 NEXMIFQ5QGS0 1516 aa29.66■■■□□ 2.34
NAE1-220ENST00000569348 PHLPP1O60346 1717 aa29.66■■■□□ 2.34
NAE1-220ENST00000569348 SLC4A1APQ9BWU0 796 aaKnown RBP29.66■■■□□ 2.34
NAE1-220ENST00000569348 C19orf44Q9H6X5 657 aa29.65■■■□□ 2.34
NAE1-220ENST00000569348 ATF3P18847 181 aa29.64■■■□□ 2.34
NAE1-220ENST00000569348 FOXD1Q16676 465 aa29.64■■■□□ 2.34
NAE1-220ENST00000569348 KIF1BO60333 1816 aa29.63■■■□□ 2.33
NAE1-220ENST00000569348 CADPS2Q86UW7 1296 aa29.62■■■□□ 2.33
NAE1-220ENST00000569348 XRN1Q8IZH2 1706 aaKnown RBP29.61■■■□□ 2.33
NAE1-220ENST00000569348 COL16A1Q07092 1604 aaPredicted RBP29.56■■■□□ 2.32
NAE1-220ENST00000569348 SETD5Q9C0A6 1442 aa29.56■■■□□ 2.32
NAE1-220ENST00000569348 ACIN1Q9UKV3 1341 aaKnown RBP29.56■■■□□ 2.32
NAE1-220ENST00000569348 JCADQ9P266 1359 aa29.55■■■□□ 2.32
NAE1-220ENST00000569348 POTEAQ6S8J7 498 aa29.54■■■□□ 2.32
NAE1-220ENST00000569348 BRINP3Q76B58 766 aa29.53■■■□□ 2.32
NAE1-220ENST00000569348 VGFO15240 615 aaPredicted RBP29.49■■■□□ 2.31
NAE1-220ENST00000569348 AHDC1Q5TGY3 1603 aaPredicted RBP29.48■■■□□ 2.31
NAE1-220ENST00000569348 MST1RQ04912 1400 aa29.47■■■□□ 2.31
NAE1-220ENST00000569348 DCCP43146 1447 aa29.46■■■□□ 2.31
NAE1-220ENST00000569348 SETD1AO15047 1707 aaKnown RBP29.45■■■□□ 2.31
NAE1-220ENST00000569348 HRCP23327 699 aa29.45■■■□□ 2.31
NAE1-220ENST00000569348 MPHOSPH9Q99550 1183 aa29.45■■■□□ 2.31
NAE1-220ENST00000569348 LRP6O75581 1613 aa29.45■■■□□ 2.3
NAE1-220ENST00000569348 ADGRL3Q9HAR2 1447 aa29.45■■■□□ 2.3
NAE1-220ENST00000569348 RPGRIP1LQ68CZ1 1315 aa29.45■■■□□ 2.3
NAE1-220ENST00000569348 NALCNQ8IZF0 1738 aa29.44■■■□□ 2.3
NAE1-220ENST00000569348 PPLO60437 1756 aa29.44■■■□□ 2.3
NAE1-220ENST00000569348 RAB3GAP2Q9H2M9 1393 aa29.43■■■□□ 2.3
NAE1-220ENST00000569348 TRIM26Q12899 539 aaPredicted RBP29.43■■■□□ 2.3
NAE1-220ENST00000569348 RGL3Q3MIN7 710 aa29.43■■■□□ 2.3
NAE1-220ENST00000569348 DDX17Q92841 729 aaKnown RBP29.43■■■□□ 2.3
NAE1-220ENST00000569348 ASXL1Q8IXJ9 1541 aa29.43■■■□□ 2.3
NAE1-220ENST00000569348 ROBO2Q9HCK4 1378 aa29.41■■■□□ 2.3
NAE1-220ENST00000569348 CCDC144AA2RUR9 1427 aa29.39■■■□□ 2.3
NAE1-220ENST00000569348 ADGRF5Q8IZF2 1346 aa29.39■■■□□ 2.3
NAE1-220ENST00000569348 MEX3CQ5U5Q3 659 aaKnown RBP29.38■■■□□ 2.29
NAE1-220ENST00000569348 SPATA31A6Q5VVP1 1343 aa29.38■■■□□ 2.29
NAE1-220ENST00000569348 PTCH1Q13635 1447 aa29.37■■■□□ 2.29
NAE1-220ENST00000569348 NUTM2BA6NNL0 878 aaPredicted RBP29.36■■■□□ 2.29
NAE1-220ENST00000569348 NUTM2EB1AL46 878 aaPredicted RBP29.36■■■□□ 2.29
NAE1-220ENST00000569348 NUTM2AQ8IVF1 878 aaPredicted RBP29.36■■■□□ 2.29
NAE1-220ENST00000569348 SHPRHQ149N8 1683 aa29.36■■■□□ 2.29
NAE1-220ENST00000569348 SPATA31E1Q6ZUB1 1445 aa29.34■■■□□ 2.29
NAE1-220ENST00000569348 C1orf167Q5SNV9 1468 aa29.33■■■□□ 2.29
NAE1-220ENST00000569348 NHSL1Q5SYE7 1610 aa29.33■■■□□ 2.29
NAE1-220ENST00000569348 ORAI2Q96SN7 254 aa29.29■■■□□ 2.28
NAE1-220ENST00000569348 STK26Q9P289 416 aa29.29■■■□□ 2.28
NAE1-220ENST00000569348 TMEM132EQ6IEE7 984 aa29.26■■■□□ 2.27
NAE1-220ENST00000569348 LRRC59Q96AG4 307 aaKnown RBP29.26■■■□□ 2.27
NAE1-220ENST00000569348 IFT172Q9UG01 1749 aa29.25■■■□□ 2.27
NAE1-220ENST00000569348 PRAG1Q86YV5 1406 aa29.25■■■□□ 2.27
NAE1-220ENST00000569348 ANKRD30BQ9BXX2 1392 aa29.24■■■□□ 2.27
NAE1-220ENST00000569348 WAPLQ7Z5K2 1190 aa29.23■■■□□ 2.27
NAE1-220ENST00000569348 PNPLA6Q8IY17 1366 aa29.22■■■□□ 2.27
NAE1-220ENST00000569348 ZNF772Q68DY9 489 aaPredicted RBP29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms