RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 SLC26A8Q96RN1 970 aa13.96□□□□□ -0.17
UBR1-210ENST00000569337 RAB3GAP2Q9H2M9 1393 aa13.96□□□□□ -0.18
UBR1-210ENST00000569337 KDM5AP29375 1690 aaKnown RBP13.95□□□□□ -0.18
UBR1-210ENST00000569337 SENP3Q9H4L4 574 aaPredicted RBP13.95□□□□□ -0.18
UBR1-210ENST00000569337 RIMS2Q9UQ26 1411 aa13.94□□□□□ -0.18
UBR1-210ENST00000569337 TOM1O60784 492 aa13.93□□□□□ -0.18
UBR1-210ENST00000569337 NUTM2DQ5VT03 806 aaPredicted RBP13.93□□□□□ -0.18
UBR1-210ENST00000569337 ZFYVE9O95405 1425 aa13.92□□□□□ -0.18
UBR1-210ENST00000569337 ZNF326Q5BKZ1 582 aaKnown RBP13.92□□□□□ -0.18
UBR1-210ENST00000569337 KCNA6P17658 529 aa13.91□□□□□ -0.18
UBR1-210ENST00000569337 PLEKHG1Q9ULL1 1385 aa13.91□□□□□ -0.18
UBR1-210ENST00000569337 ACIN1Q9UKV3 1341 aaKnown RBP13.9□□□□□ -0.18
UBR1-210ENST00000569337 TMEM131LA2VDJ0 1609 aa13.9□□□□□ -0.18
UBR1-210ENST00000569337 SCAF1Q9H7N4 1312 aaKnown RBP13.9□□□□□ -0.19
UBR1-210ENST00000569337 PIP4K2BP78356 416 aa13.89□□□□□ -0.19
UBR1-210ENST00000569337 TBX22Q9Y458 520 aa13.89□□□□□ -0.19
UBR1-210ENST00000569337 LRRC7Q96NW7 1537 aa13.89□□□□□ -0.19
UBR1-210ENST00000569337 HRCP23327 699 aa13.88□□□□□ -0.19
UBR1-210ENST00000569337 MPHOSPH9Q99550 1183 aa13.88□□□□□ -0.19
UBR1-210ENST00000569337 FOXD1Q16676 465 aa13.87□□□□□ -0.19
UBR1-210ENST00000569337 PROSER2Q86WR7 435 aaPredicted RBP13.87□□□□□ -0.19
UBR1-210ENST00000569337 TRPM2O94759 1503 aa13.85□□□□□ -0.19
UBR1-210ENST00000569337 SPHKAPQ2M3C7 1700 aa13.84□□□□□ -0.19
UBR1-210ENST00000569337 TMEM94Q12767 1356 aa13.83□□□□□ -0.19
UBR1-210ENST00000569337 RBM33Q96EV2 1170 aaKnown RBP13.83□□□□□ -0.2
UBR1-210ENST00000569337 STRCP1A6NGW2 1772 aa13.83□□□□□ -0.2
UBR1-210ENST00000569337 VGFO15240 615 aaPredicted RBP13.82□□□□□ -0.2
UBR1-210ENST00000569337 MYO5BQ9ULV0 1848 aa13.82□□□□□ -0.2
UBR1-210ENST00000569337 ADAMTS13Q76LX8 1427 aa13.81□□□□□ -0.2
UBR1-210ENST00000569337 CLTCL1P53675 1640 aa13.81□□□□□ -0.2
UBR1-210ENST00000569337 RPGRIP1LQ68CZ1 1315 aa13.81□□□□□ -0.2
UBR1-210ENST00000569337 PIK3R4Q99570 1358 aa13.81□□□□□ -0.2
UBR1-210ENST00000569337 AMOTL2Q9Y2J4 779 aa13.8□□□□□ -0.2
UBR1-210ENST00000569337 DHX57Q6P158 1386 aaKnown RBP13.8□□□□□ -0.2
UBR1-210ENST00000569337 CCDC144AA2RUR9 1427 aa13.8□□□□□ -0.2
UBR1-210ENST00000569337 NKTRP30414 1462 aaKnown RBP13.8□□□□□ -0.2
UBR1-210ENST00000569337 HSPA1LP34931 641 aa13.79□□□□□ -0.2
UBR1-210ENST00000569337 RGL3Q3MIN7 710 aa13.79□□□□□ -0.2
UBR1-210ENST00000569337 C14orf37Q86TY3 774 aa13.78□□□□□ -0.2
UBR1-210ENST00000569337 MSH6P52701 1360 aa13.77□□□□□ -0.21
UBR1-210ENST00000569337 DIP2AQ14689 1571 aa13.77□□□□□ -0.21
UBR1-210ENST00000569337 NWD1Q149M9 1564 aa13.76□□□□□ -0.21
UBR1-210ENST00000569337 NEXMIFQ5QGS0 1516 aa13.75□□□□□ -0.21
UBR1-210ENST00000569337 ALKQ9UM73 1620 aa13.75□□□□□ -0.21
UBR1-210ENST00000569337 SETBP1Q9Y6X0 1596 aa13.75□□□□□ -0.21
UBR1-210ENST00000569337 PTPRUQ92729 1446 aa13.74□□□□□ -0.21
UBR1-210ENST00000569337 NCOA3Q9Y6Q9 1424 aa13.74□□□□□ -0.21
UBR1-210ENST00000569337 METP08581 1390 aa13.74□□□□□ -0.21
UBR1-210ENST00000569337 KIF1BO60333 1816 aa13.74□□□□□ -0.21
UBR1-210ENST00000569337 C19orf44Q9H6X5 657 aa13.73□□□□□ -0.21
UBR1-210ENST00000569337 SLAIN2Q9P270 581 aa13.73□□□□□ -0.21
UBR1-210ENST00000569337 FAM135BQ49AJ0 1406 aa13.72□□□□□ -0.21
UBR1-210ENST00000569337 ANKRD30BQ9BXX2 1392 aa13.71□□□□□ -0.21
UBR1-210ENST00000569337 DISP3Q9P2K9 1392 aa13.71□□□□□ -0.21
UBR1-210ENST00000569337 CHD2O14647 1828 aaKnown RBP13.71□□□□□ -0.21
UBR1-210ENST00000569337 ATF3P18847 181 aa13.71□□□□□ -0.21
UBR1-210ENST00000569337 CADPS2Q86UW7 1296 aa13.71□□□□□ -0.21
UBR1-210ENST00000569337 SPATA31E1Q6ZUB1 1445 aa13.71□□□□□ -0.22
UBR1-210ENST00000569337 ADGRF5Q8IZF2 1346 aa13.7□□□□□ -0.22
UBR1-210ENST00000569337 NRXN3Q9Y4C0 1643 aa13.7□□□□□ -0.22
UBR1-210ENST00000569337 XIRP1Q702N8 1843 aaKnown RBP13.69□□□□□ -0.22
UBR1-210ENST00000569337 CCER1Q8TC90 406 aaPredicted RBP13.66□□□□□ -0.22
UBR1-210ENST00000569337 SIN3AQ96ST3 1273 aa13.64□□□□□ -0.23
UBR1-210ENST00000569337 STK26Q9P289 416 aa13.64□□□□□ -0.23
UBR1-210ENST00000569337 ROBO2Q9HCK4 1378 aa13.63□□□□□ -0.23
UBR1-210ENST00000569337 TMEM132EQ6IEE7 984 aa13.63□□□□□ -0.23
UBR1-210ENST00000569337 XRN1Q8IZH2 1706 aaKnown RBP13.63□□□□□ -0.23
UBR1-210ENST00000569337 DCCP43146 1447 aa13.63□□□□□ -0.23
UBR1-210ENST00000569337 PPLO60437 1756 aa13.63□□□□□ -0.23
UBR1-210ENST00000569337 DCAF11Q8TEB1 546 aa13.62□□□□□ -0.23
UBR1-210ENST00000569337 C14orf93Q9H972 538 aaKnown RBP13.62□□□□□ -0.23
UBR1-210ENST00000569337 KDM2AQ9Y2K7 1162 aa13.62□□□□□ -0.23
UBR1-210ENST00000569337 PTCH1Q13635 1447 aa13.62□□□□□ -0.23
UBR1-210ENST00000569337 ROBO1Q9Y6N7 1651 aa13.61□□□□□ -0.23
UBR1-210ENST00000569337 CFAP70Q5T0N1 1121 aa13.61□□□□□ -0.23
UBR1-210ENST00000569337 BRINP3Q76B58 766 aa13.61□□□□□ -0.23
UBR1-210ENST00000569337 PIK3C2GO75747 1445 aa13.61□□□□□ -0.23
UBR1-210ENST00000569337 ADGRL3Q9HAR2 1447 aa13.61□□□□□ -0.23
UBR1-210ENST00000569337 STAC3Q96MF2 364 aa13.6□□□□□ -0.23
UBR1-210ENST00000569337 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.6□□□□□ -0.23
UBR1-210ENST00000569337 CLSPNQ9HAW4 1339 aa13.6□□□□□ -0.23
UBR1-210ENST00000569337 LRPPRCP42704 1394 aaKnown RBP13.59□□□□□ -0.23
UBR1-210ENST00000569337 ABCC11Q96J66 1382 aa13.59□□□□□ -0.23
UBR1-210ENST00000569337 PRAG1Q86YV5 1406 aa13.59□□□□□ -0.23
UBR1-210ENST00000569337 WAPLQ7Z5K2 1190 aa13.59□□□□□ -0.23
UBR1-210ENST00000569337 NEUROD1Q13562 356 aa13.58□□□□□ -0.24
UBR1-210ENST00000569337 MYOM2P54296 1465 aa13.58□□□□□ -0.24
UBR1-210ENST00000569337 MST1RQ04912 1400 aa13.57□□□□□ -0.24
UBR1-210ENST00000569337 SETD1AO15047 1707 aaKnown RBP13.57□□□□□ -0.24
UBR1-210ENST00000569337 ILDR2Q71H61 639 aa13.57□□□□□ -0.24
UBR1-210ENST00000569337 YTHDC2Q9H6S0 1430 aaKnown RBP13.56□□□□□ -0.24
UBR1-210ENST00000569337 NRXN1Q9ULB1 1477 aa13.56□□□□□ -0.24
UBR1-210ENST00000569337 SIRT1Q96EB6 747 aa13.56□□□□□ -0.24
UBR1-210ENST00000569337 MED1Q15648 1581 aaPredicted RBP13.56□□□□□ -0.24
UBR1-210ENST00000569337 JCADQ9P266 1359 aa13.56□□□□□ -0.24
UBR1-210ENST00000569337 IFT172Q9UG01 1749 aa13.56□□□□□ -0.24
UBR1-210ENST00000569337 TECPR2O15040 1411 aa13.56□□□□□ -0.24
UBR1-210ENST00000569337 ORAI2Q96SN7 254 aa13.54□□□□□ -0.24
UBR1-210ENST00000569337 C1orf167Q5SNV9 1468 aa13.54□□□□□ -0.24
UBR1-210ENST00000569337 PLEKHH1Q9ULM0 1364 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms