RNA–Protein interactions for RNA: ENST00000569288.1

LINC00555-201, long intergenic non-protein coding RNA 555, humanhuman

BASIC

Gene LINC00555, Length 442 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00555-201ENST00000569288 THEMISQ8N1K5 641 aaPredicted RBP13.42□□□□□ -0.26
LINC00555-201ENST00000569288 DCAF11Q8TEB1 546 aa13.42□□□□□ -0.26
LINC00555-201ENST00000569288 SLIT1O75093 1534 aa13.42□□□□□ -0.26
LINC00555-201ENST00000569288 GPRASP1Q5JY77 1395 aa13.42□□□□□ -0.26
LINC00555-201ENST00000569288 CLTCL1P53675 1640 aa13.41□□□□□ -0.26
LINC00555-201ENST00000569288 ARHGAP23Q9P227 1491 aa13.41□□□□□ -0.26
LINC00555-201ENST00000569288 RALGAPBQ86X10 1494 aa13.4□□□□□ -0.26
LINC00555-201ENST00000569288 PRAG1Q86YV5 1406 aa13.39□□□□□ -0.27
LINC00555-201ENST00000569288 DIEXFQ68CQ4 756 aaKnown RBP13.39□□□□□ -0.27
LINC00555-201ENST00000569288 ZFYVE9O95405 1425 aa13.39□□□□□ -0.27
LINC00555-201ENST00000569288 MED14O60244 1454 aa13.37□□□□□ -0.27
LINC00555-201ENST00000569288 HSPA2P54652 639 aa13.37□□□□□ -0.27
LINC00555-201ENST00000569288 MYOM2P54296 1465 aa13.36□□□□□ -0.27
LINC00555-201ENST00000569288 VGFO15240 615 aaPredicted RBP13.36□□□□□ -0.27
LINC00555-201ENST00000569288 TMEM2Q9UHN6 1383 aa13.35□□□□□ -0.27
LINC00555-201ENST00000569288 RGL3Q3MIN7 710 aa13.35□□□□□ -0.27
LINC00555-201ENST00000569288 DMRT2Q9Y5R5 561 aa13.35□□□□□ -0.27
LINC00555-201ENST00000569288 NRXN1Q9ULB1 1477 aa13.34□□□□□ -0.27
LINC00555-201ENST00000569288 IFT172Q9UG01 1749 aa13.33□□□□□ -0.27
LINC00555-201ENST00000569288 PPLO60437 1756 aa13.33□□□□□ -0.28
LINC00555-201ENST00000569288 LAMC1P11047 1609 aa13.33□□□□□ -0.28
LINC00555-201ENST00000569288 HDGFP51858 240 aaKnown RBP13.33□□□□□ -0.28
LINC00555-201ENST00000569288 ANKLE2Q86XL3 938 aa13.33□□□□□ -0.28
LINC00555-201ENST00000569288 STAG3Q9UJ98 1225 aa13.33□□□□□ -0.28
LINC00555-201ENST00000569288 SCAF11Q99590 1463 aaKnown RBP13.33□□□□□ -0.28
LINC00555-201ENST00000569288 IQGAP1P46940 1657 aa13.33□□□□□ -0.28
LINC00555-201ENST00000569288 HSPA5P11021 654 aaKnown RBP13.32□□□□□ -0.28
LINC00555-201ENST00000569288 CARD11Q9BXL7 1154 aa13.32□□□□□ -0.28
LINC00555-201ENST00000569288 KDM2AQ9Y2K7 1162 aa13.31□□□□□ -0.28
LINC00555-201ENST00000569288 KIAA1210Q9ULL0 1709 aa13.3□□□□□ -0.28
LINC00555-201ENST00000569288 NEXMIFQ5QGS0 1516 aa13.3□□□□□ -0.28
LINC00555-201ENST00000569288 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.3□□□□□ -0.28
LINC00555-201ENST00000569288 EID1Q9Y6B2 187 aa13.3□□□□□ -0.28
LINC00555-201ENST00000569288 ROCK2O75116 1388 aaKnown RBP13.3□□□□□ -0.28
LINC00555-201ENST00000569288 C14orf93Q9H972 538 aaKnown RBP13.29□□□□□ -0.28
LINC00555-201ENST00000569288 USP47Q96K76 1375 aa13.29□□□□□ -0.28
LINC00555-201ENST00000569288 RIMS2Q9UQ26 1411 aa13.29□□□□□ -0.28
LINC00555-201ENST00000569288 LTKP29376 864 aa13.28□□□□□ -0.28
LINC00555-201ENST00000569288 TXNDC2Q86VQ3 553 aa13.28□□□□□ -0.28
LINC00555-201ENST00000569288 NPHP4O75161 1426 aaPredicted RBP13.28□□□□□ -0.28
LINC00555-201ENST00000569288 NCKAP5LQ9HCH0 1330 aa13.27□□□□□ -0.29
LINC00555-201ENST00000569288 PLEKHG1Q9ULL1 1385 aa13.27□□□□□ -0.29
LINC00555-201ENST00000569288 DIP2AQ14689 1571 aa13.26□□□□□ -0.29
LINC00555-201ENST00000569288 TRPM1Q7Z4N2 1603 aa13.26□□□□□ -0.29
LINC00555-201ENST00000569288 SETBP1Q9Y6X0 1596 aa13.25□□□□□ -0.29
LINC00555-201ENST00000569288 CHGAP10645 457 aaKnown RBP13.25□□□□□ -0.29
LINC00555-201ENST00000569288 CDCA8Q53HL2 280 aa13.25□□□□□ -0.29
LINC00555-201ENST00000569288 ZNF326Q5BKZ1 582 aaKnown RBP13.25□□□□□ -0.29
LINC00555-201ENST00000569288 PUS7Q96PZ0 661 aaKnown RBP13.25□□□□□ -0.29
LINC00555-201ENST00000569288 NRXN3Q9Y4C0 1643 aa13.24□□□□□ -0.29
LINC00555-201ENST00000569288 PIK3C2GO75747 1445 aa13.24□□□□□ -0.29
LINC00555-201ENST00000569288 EIF3AQ14152 1382 aaKnown RBP13.24□□□□□ -0.29
LINC00555-201ENST00000569288 CHD2O14647 1828 aaKnown RBP13.24□□□□□ -0.29
LINC00555-201ENST00000569288 SBNO2Q9Y2G9 1366 aa13.23□□□□□ -0.29
LINC00555-201ENST00000569288 NBPF1Q3BBV0 1214 aa13.23□□□□□ -0.29
LINC00555-201ENST00000569288 SETD1AO15047 1707 aaKnown RBP13.22□□□□□ -0.29
LINC00555-201ENST00000569288 CCDC7Q96M83 1385 aa13.22□□□□□ -0.29
LINC00555-201ENST00000569288 WASHC2AQ641Q2 1341 aa13.21□□□□□ -0.29
LINC00555-201ENST00000569288 ADGRF5Q8IZF2 1346 aa13.21□□□□□ -0.29
LINC00555-201ENST00000569288 ST20-MTHFSA0A0A6YYL1 179 aa13.21□□□□□ -0.29
LINC00555-201ENST00000569288 ADAMTS13Q76LX8 1427 aa13.21□□□□□ -0.3
LINC00555-201ENST00000569288 PIK3R4Q99570 1358 aa13.2□□□□□ -0.3
LINC00555-201ENST00000569288 SIRT1Q96EB6 747 aa13.2□□□□□ -0.3
LINC00555-201ENST00000569288 TBX22Q9Y458 520 aa13.2□□□□□ -0.3
LINC00555-201ENST00000569288 LTBP4Q8N2S1 1624 aa13.2□□□□□ -0.3
LINC00555-201ENST00000569288 STRCP1A6NGW2 1772 aa13.2□□□□□ -0.3
LINC00555-201ENST00000569288 TMF1P82094 1093 aa13.19□□□□□ -0.3
LINC00555-201ENST00000569288 TESK2Q96S53 571 aa13.19□□□□□ -0.3
LINC00555-201ENST00000569288 NWD1Q149M9 1564 aa13.19□□□□□ -0.3
LINC00555-201ENST00000569288 DDX10Q13206 875 aaKnown RBP13.18□□□□□ -0.3
LINC00555-201ENST00000569288 CPS1P31327 1500 aa13.18□□□□□ -0.3
LINC00555-201ENST00000569288 KIF7Q2M1P5 1343 aa13.17□□□□□ -0.3
LINC00555-201ENST00000569288 CCER2I3L3R5 266 aa13.17□□□□□ -0.3
LINC00555-201ENST00000569288 CFAP70Q5T0N1 1121 aa13.17□□□□□ -0.3
LINC00555-201ENST00000569288 ALKQ9UM73 1620 aa13.17□□□□□ -0.3
LINC00555-201ENST00000569288 IQSEC2Q5JU85 1478 aa13.16□□□□□ -0.3
LINC00555-201ENST00000569288 C11orf95C9JLR9 678 aaPredicted RBP13.15□□□□□ -0.3
LINC00555-201ENST00000569288 XRN1Q8IZH2 1706 aaKnown RBP13.15□□□□□ -0.3
LINC00555-201ENST00000569288 KTN1Q86UP2 1357 aaKnown RBP13.15□□□□□ -0.3
LINC00555-201ENST00000569288 XIRP1Q702N8 1843 aaKnown RBP13.14□□□□□ -0.31
LINC00555-201ENST00000569288 ANP32CO43423 234 aa13.14□□□□□ -0.31
LINC00555-201ENST00000569288 NUTM2DQ5VT03 806 aaPredicted RBP13.14□□□□□ -0.31
LINC00555-201ENST00000569288 NKTRP30414 1462 aaKnown RBP13.14□□□□□ -0.31
LINC00555-201ENST00000569288 ADGRB1O14514 1584 aa13.13□□□□□ -0.31
LINC00555-201ENST00000569288 KCNA6P17658 529 aa13.13□□□□□ -0.31
LINC00555-201ENST00000569288 SLC26A8Q96RN1 970 aa13.13□□□□□ -0.31
LINC00555-201ENST00000569288 HIRIP3Q9BW71 556 aaPredicted RBP13.13□□□□□ -0.31
LINC00555-201ENST00000569288 KNDC1Q76NI1 1749 aa13.13□□□□□ -0.31
LINC00555-201ENST00000569288 ZNF335Q9H4Z2 1342 aaPredicted RBP13.13□□□□□ -0.31
LINC00555-201ENST00000569288 MIER1Q8N108 512 aa13.12□□□□□ -0.31
LINC00555-201ENST00000569288 ABCC11Q96J66 1382 aa13.11□□□□□ -0.31
LINC00555-201ENST00000569288 BCANQ96GW7 911 aa13.11□□□□□ -0.31
LINC00555-201ENST00000569288 CENPJQ9HC77 1338 aaPredicted RBP13.11□□□□□ -0.31
LINC00555-201ENST00000569288 NCOA3Q9Y6Q9 1424 aa13.1□□□□□ -0.31
LINC00555-201ENST00000569288 LRRC7Q96NW7 1537 aa13.09□□□□□ -0.31
LINC00555-201ENST00000569288 ASXL1Q8IXJ9 1541 aa13.08□□□□□ -0.31
LINC00555-201ENST00000569288 DLC1Q96QB1 1528 aa13.08□□□□□ -0.31
LINC00555-201ENST00000569288 METP08581 1390 aa13.08□□□□□ -0.31
LINC00555-201ENST00000569288 LRPPRCP42704 1394 aaKnown RBP13.08□□□□□ -0.31
LINC00555-201ENST00000569288 TECPR2O15040 1411 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms