RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 TXNDC2Q86VQ3 553 aa19.06■□□□□ 0.64
CNOT1-217ENST00000569263 PPP1R15AO75807 674 aaPredicted RBP19.05■□□□□ 0.64
CNOT1-217ENST00000569263 HDGFP51858 240 aaKnown RBP19.05■□□□□ 0.64
CNOT1-217ENST00000569263 PPLO60437 1756 aa19.05■□□□□ 0.64
CNOT1-217ENST00000569263 NEXMIFQ5QGS0 1516 aa19.05■□□□□ 0.64
CNOT1-217ENST00000569263 NPHP4O75161 1426 aaPredicted RBP19.04■□□□□ 0.64
CNOT1-217ENST00000569263 SPATA31E1Q6ZUB1 1445 aa19.04■□□□□ 0.64
CNOT1-217ENST00000569263 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.04■□□□□ 0.64
CNOT1-217ENST00000569263 IFT172Q9UG01 1749 aa19.04■□□□□ 0.64
CNOT1-217ENST00000569263 DMRT2Q9Y5R5 561 aa19.04■□□□□ 0.64
CNOT1-217ENST00000569263 MED14O60244 1454 aa19.03■□□□□ 0.64
CNOT1-217ENST00000569263 LTKP29376 864 aa19.03■□□□□ 0.64
CNOT1-217ENST00000569263 RGL3Q3MIN7 710 aa19.02■□□□□ 0.64
CNOT1-217ENST00000569263 NUTM2DQ5VT03 806 aaPredicted RBP19.01■□□□□ 0.63
CNOT1-217ENST00000569263 RPGRIP1LQ68CZ1 1315 aa19■□□□□ 0.63
CNOT1-217ENST00000569263 BCANQ96GW7 911 aa18.99■□□□□ 0.63
CNOT1-217ENST00000569263 PLEKHG1Q9ULL1 1385 aa18.98■□□□□ 0.63
CNOT1-217ENST00000569263 SENP3Q9H4L4 574 aaPredicted RBP18.96■□□□□ 0.63
CNOT1-217ENST00000569263 SIN3AQ96ST3 1273 aa18.95■□□□□ 0.62
CNOT1-217ENST00000569263 DIP2AQ14689 1571 aa18.94■□□□□ 0.62
CNOT1-217ENST00000569263 VGFO15240 615 aaPredicted RBP18.94■□□□□ 0.62
CNOT1-217ENST00000569263 NEUROD1Q13562 356 aa18.94■□□□□ 0.62
CNOT1-217ENST00000569263 SETBP1Q9Y6X0 1596 aa18.93■□□□□ 0.62
CNOT1-217ENST00000569263 NRXN3Q9Y4C0 1643 aa18.92■□□□□ 0.62
CNOT1-217ENST00000569263 MYOM2P54296 1465 aa18.92■□□□□ 0.62
CNOT1-217ENST00000569263 CCER1Q8TC90 406 aaPredicted RBP18.92■□□□□ 0.62
CNOT1-217ENST00000569263 SLC26A8Q96RN1 970 aa18.89■□□□□ 0.61
CNOT1-217ENST00000569263 CLSPNQ9HAW4 1339 aa18.89■□□□□ 0.61
CNOT1-217ENST00000569263 DCAF11Q8TEB1 546 aa18.88■□□□□ 0.61
CNOT1-217ENST00000569263 ADAMTS13Q76LX8 1427 aa18.88■□□□□ 0.61
CNOT1-217ENST00000569263 SETD1AO15047 1707 aaKnown RBP18.87■□□□□ 0.61
CNOT1-217ENST00000569263 LAMC1P11047 1609 aa18.87■□□□□ 0.61
CNOT1-217ENST00000569263 ADGRF5Q8IZF2 1346 aa18.87■□□□□ 0.61
CNOT1-217ENST00000569263 ALKQ9UM73 1620 aa18.86■□□□□ 0.61
CNOT1-217ENST00000569263 PIK3C2GO75747 1445 aa18.86■□□□□ 0.61
CNOT1-217ENST00000569263 TONSLQ96HA7 1378 aa18.86■□□□□ 0.61
CNOT1-217ENST00000569263 KDM2AQ9Y2K7 1162 aa18.86■□□□□ 0.61
CNOT1-217ENST00000569263 NRXN1Q9ULB1 1477 aa18.85■□□□□ 0.61
CNOT1-217ENST00000569263 ZNF335Q9H4Z2 1342 aaPredicted RBP18.85■□□□□ 0.61
CNOT1-217ENST00000569263 STAC3Q96MF2 364 aa18.85■□□□□ 0.61
CNOT1-217ENST00000569263 CHD2O14647 1828 aaKnown RBP18.85■□□□□ 0.61
CNOT1-217ENST00000569263 STRCP1A6NGW2 1772 aa18.84■□□□□ 0.61
CNOT1-217ENST00000569263 TBX22Q9Y458 520 aa18.84■□□□□ 0.61
CNOT1-217ENST00000569263 NWD1Q149M9 1564 aa18.83■□□□□ 0.6
CNOT1-217ENST00000569263 L3MBTL2Q969R5 705 aa18.82■□□□□ 0.6
CNOT1-217ENST00000569263 LTBP4Q8N2S1 1624 aa18.82■□□□□ 0.6
CNOT1-217ENST00000569263 PIK3R4Q99570 1358 aa18.81■□□□□ 0.6
CNOT1-217ENST00000569263 CPS1P31327 1500 aa18.81■□□□□ 0.6
CNOT1-217ENST00000569263 XRN1Q8IZH2 1706 aaKnown RBP18.79■□□□□ 0.6
CNOT1-217ENST00000569263 NKTRP30414 1462 aaKnown RBP18.78■□□□□ 0.6
CNOT1-217ENST00000569263 KIAA1210Q9ULL0 1709 aa18.78■□□□□ 0.6
CNOT1-217ENST00000569263 METP08581 1390 aa18.78■□□□□ 0.6
CNOT1-217ENST00000569263 PRAG1Q86YV5 1406 aa18.77■□□□□ 0.6
CNOT1-217ENST00000569263 KCNA6P17658 529 aa18.77■□□□□ 0.6
CNOT1-217ENST00000569263 ASXL1Q8IXJ9 1541 aa18.76■□□□□ 0.59
CNOT1-217ENST00000569263 PTPRUQ92729 1446 aa18.75■□□□□ 0.59
CNOT1-217ENST00000569263 CFAP70Q5T0N1 1121 aa18.75■□□□□ 0.59
CNOT1-217ENST00000569263 C14orf93Q9H972 538 aaKnown RBP18.75■□□□□ 0.59
CNOT1-217ENST00000569263 KNDC1Q76NI1 1749 aa18.74■□□□□ 0.59
CNOT1-217ENST00000569263 TRPM1Q7Z4N2 1603 aa18.74■□□□□ 0.59
CNOT1-217ENST00000569263 AMOTL2Q9Y2J4 779 aa18.73■□□□□ 0.59
CNOT1-217ENST00000569263 LRRC7Q96NW7 1537 aa18.72■□□□□ 0.59
CNOT1-217ENST00000569263 TMEM132EQ6IEE7 984 aa18.71■□□□□ 0.59
CNOT1-217ENST00000569263 XIRP1Q702N8 1843 aaKnown RBP18.71■□□□□ 0.59
CNOT1-217ENST00000569263 ADGRB1O14514 1584 aa18.71■□□□□ 0.59
CNOT1-217ENST00000569263 PROSER2Q86WR7 435 aaPredicted RBP18.7■□□□□ 0.58
CNOT1-217ENST00000569263 YTHDC2Q9H6S0 1430 aaKnown RBP18.7■□□□□ 0.58
CNOT1-217ENST00000569263 TIMELESSQ9UNS1 1208 aa18.7■□□□□ 0.58
CNOT1-217ENST00000569263 LRPPRCP42704 1394 aaKnown RBP18.69■□□□□ 0.58
CNOT1-217ENST00000569263 PTCH1Q13635 1447 aa18.69■□□□□ 0.58
CNOT1-217ENST00000569263 CERKQ8TCT0 537 aa18.69■□□□□ 0.58
CNOT1-217ENST00000569263 STK26Q9P289 416 aa18.69■□□□□ 0.58
CNOT1-217ENST00000569263 IQSEC2Q5JU85 1478 aa18.69■□□□□ 0.58
CNOT1-217ENST00000569263 TMEM94Q12767 1356 aa18.68■□□□□ 0.58
CNOT1-217ENST00000569263 TECPR2O15040 1411 aa18.66■□□□□ 0.58
CNOT1-217ENST00000569263 ROCK2O75116 1388 aaKnown RBP18.65■□□□□ 0.58
CNOT1-217ENST00000569263 ABCC11Q96J66 1382 aa18.65■□□□□ 0.58
CNOT1-217ENST00000569263 ROBO2Q9HCK4 1378 aa18.65■□□□□ 0.58
CNOT1-217ENST00000569263 RALGAPBQ86X10 1494 aa18.65■□□□□ 0.58
CNOT1-217ENST00000569263 ARHGEF28Q8N1W1 1705 aaKnown RBP18.64■□□□□ 0.57
CNOT1-217ENST00000569263 NBPF8Q3BBV2 869 aa18.64■□□□□ 0.57
CNOT1-217ENST00000569263 C14orf37Q86TY3 774 aa18.64■□□□□ 0.57
CNOT1-217ENST00000569263 RBM33Q96EV2 1170 aaKnown RBP18.64■□□□□ 0.57
CNOT1-217ENST00000569263 DLC1Q96QB1 1528 aa18.64■□□□□ 0.57
CNOT1-217ENST00000569263 NALCNQ8IZF0 1738 aa18.63■□□□□ 0.57
CNOT1-217ENST00000569263 NBPF1Q3BBV0 1214 aa18.62■□□□□ 0.57
CNOT1-217ENST00000569263 NCOA3Q9Y6Q9 1424 aa18.62■□□□□ 0.57
CNOT1-217ENST00000569263 MSH6P52701 1360 aa18.61■□□□□ 0.57
CNOT1-217ENST00000569263 TRAK1Q9UPV9 953 aa18.61■□□□□ 0.57
CNOT1-217ENST00000569263 FAM135BQ49AJ0 1406 aa18.6■□□□□ 0.57
CNOT1-217ENST00000569263 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.6■□□□□ 0.57
CNOT1-217ENST00000569263 ADGRL3Q9HAR2 1447 aa18.59■□□□□ 0.57
CNOT1-217ENST00000569263 POGKQ9P215 609 aa18.58■□□□□ 0.56
CNOT1-217ENST00000569263 GPRASP1Q5JY77 1395 aa18.57■□□□□ 0.56
CNOT1-217ENST00000569263 SIRT1Q96EB6 747 aa18.57■□□□□ 0.56
CNOT1-217ENST00000569263 PLEKHH1Q9ULM0 1364 aa18.56■□□□□ 0.56
CNOT1-217ENST00000569263 WAPLQ7Z5K2 1190 aa18.56■□□□□ 0.56
CNOT1-217ENST00000569263 PRAM1Q96QH2 718 aa18.56■□□□□ 0.56
CNOT1-217ENST00000569263 CARD11Q9BXL7 1154 aa18.56■□□□□ 0.56
CNOT1-217ENST00000569263 EIF3AQ14152 1382 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms