RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 NEURL4Q96JN8 1562 aa13.24□□□□□ -0.29
CHD9-219ENST00000569225 RGL3Q3MIN7 710 aa13.24□□□□□ -0.29
CHD9-219ENST00000569225 ZFYVE9O95405 1425 aa13.24□□□□□ -0.29
CHD9-219ENST00000569225 LTKP29376 864 aa13.23□□□□□ -0.29
CHD9-219ENST00000569225 NPHP4O75161 1426 aaPredicted RBP13.23□□□□□ -0.29
CHD9-219ENST00000569225 VGFO15240 615 aaPredicted RBP13.23□□□□□ -0.29
CHD9-219ENST00000569225 KIF1BO60333 1816 aa13.23□□□□□ -0.29
CHD9-219ENST00000569225 CLSPNQ9HAW4 1339 aa13.22□□□□□ -0.29
CHD9-219ENST00000569225 MED14O60244 1454 aa13.22□□□□□ -0.29
CHD9-219ENST00000569225 CCER1Q8TC90 406 aaPredicted RBP13.22□□□□□ -0.29
CHD9-219ENST00000569225 BCANQ96GW7 911 aa13.22□□□□□ -0.29
CHD9-219ENST00000569225 PLEKHG1Q9ULL1 1385 aa13.21□□□□□ -0.29
CHD9-219ENST00000569225 NEUROD1Q13562 356 aa13.2□□□□□ -0.3
CHD9-219ENST00000569225 NUTM2DQ5VT03 806 aaPredicted RBP13.2□□□□□ -0.3
CHD9-219ENST00000569225 STAC3Q96MF2 364 aa13.2□□□□□ -0.3
CHD9-219ENST00000569225 SIN3AQ96ST3 1273 aa13.19□□□□□ -0.3
CHD9-219ENST00000569225 NEXMIFQ5QGS0 1516 aa13.19□□□□□ -0.3
CHD9-219ENST00000569225 POLR1AO95602 1720 aaPredicted RBP13.18□□□□□ -0.3
CHD9-219ENST00000569225 STRCQ7RTU9 1775 aa13.18□□□□□ -0.3
CHD9-219ENST00000569225 DCAF11Q8TEB1 546 aa13.16□□□□□ -0.3
CHD9-219ENST00000569225 MYO5BQ9ULV0 1848 aa13.16□□□□□ -0.3
CHD9-219ENST00000569225 IQGAP1P46940 1657 aa13.16□□□□□ -0.3
CHD9-219ENST00000569225 MYOM2P54296 1465 aa13.15□□□□□ -0.3
CHD9-219ENST00000569225 TONSLQ96HA7 1378 aa13.15□□□□□ -0.3
CHD9-219ENST00000569225 SLC26A8Q96RN1 970 aa13.14□□□□□ -0.31
CHD9-219ENST00000569225 TBX22Q9Y458 520 aa13.14□□□□□ -0.31
CHD9-219ENST00000569225 ADGRF5Q8IZF2 1346 aa13.13□□□□□ -0.31
CHD9-219ENST00000569225 SENP3Q9H4L4 574 aaPredicted RBP13.13□□□□□ -0.31
CHD9-219ENST00000569225 KDM2AQ9Y2K7 1162 aa13.13□□□□□ -0.31
CHD9-219ENST00000569225 SETBP1Q9Y6X0 1596 aa13.13□□□□□ -0.31
CHD9-219ENST00000569225 L3MBTL2Q969R5 705 aa13.12□□□□□ -0.31
CHD9-219ENST00000569225 DIP2AQ14689 1571 aa13.12□□□□□ -0.31
CHD9-219ENST00000569225 PPLO60437 1756 aa13.12□□□□□ -0.31
CHD9-219ENST00000569225 ADAMTS13Q76LX8 1427 aa13.12□□□□□ -0.31
CHD9-219ENST00000569225 PIK3C2GO75747 1445 aa13.11□□□□□ -0.31
CHD9-219ENST00000569225 TIMELESSQ9UNS1 1208 aa13.11□□□□□ -0.31
CHD9-219ENST00000569225 PIK3R4Q99570 1358 aa13.11□□□□□ -0.31
CHD9-219ENST00000569225 NRXN1Q9ULB1 1477 aa13.11□□□□□ -0.31
CHD9-219ENST00000569225 IFT172Q9UG01 1749 aa13.09□□□□□ -0.31
CHD9-219ENST00000569225 ZNF335Q9H4Z2 1342 aaPredicted RBP13.09□□□□□ -0.31
CHD9-219ENST00000569225 KCNA6P17658 529 aa13.08□□□□□ -0.32
CHD9-219ENST00000569225 C14orf93Q9H972 538 aaKnown RBP13.08□□□□□ -0.32
CHD9-219ENST00000569225 ALKQ9UM73 1620 aa13.07□□□□□ -0.32
CHD9-219ENST00000569225 NRXN3Q9Y4C0 1643 aa13.07□□□□□ -0.32
CHD9-219ENST00000569225 PRAG1Q86YV5 1406 aa13.06□□□□□ -0.32
CHD9-219ENST00000569225 METP08581 1390 aa13.06□□□□□ -0.32
CHD9-219ENST00000569225 CFAP70Q5T0N1 1121 aa13.06□□□□□ -0.32
CHD9-219ENST00000569225 CPS1P31327 1500 aa13.05□□□□□ -0.32
CHD9-219ENST00000569225 LAMC1P11047 1609 aa13.05□□□□□ -0.32
CHD9-219ENST00000569225 AMOTL2Q9Y2J4 779 aa13.04□□□□□ -0.32
CHD9-219ENST00000569225 NKTRP30414 1462 aaKnown RBP13.04□□□□□ -0.32
CHD9-219ENST00000569225 NWD1Q149M9 1564 aa13.02□□□□□ -0.32
CHD9-219ENST00000569225 LRPPRCP42704 1394 aaKnown RBP13.02□□□□□ -0.33
CHD9-219ENST00000569225 LTBP4Q8N2S1 1624 aa13.02□□□□□ -0.33
CHD9-219ENST00000569225 TMEM132EQ6IEE7 984 aa13.02□□□□□ -0.33
CHD9-219ENST00000569225 PROSER2Q86WR7 435 aaPredicted RBP13.02□□□□□ -0.33
CHD9-219ENST00000569225 PTPRUQ92729 1446 aa13.01□□□□□ -0.33
CHD9-219ENST00000569225 YTHDC2Q9H6S0 1430 aaKnown RBP13□□□□□ -0.33
CHD9-219ENST00000569225 ABCC11Q96J66 1382 aa13□□□□□ -0.33
CHD9-219ENST00000569225 STK26Q9P289 416 aa13□□□□□ -0.33
CHD9-219ENST00000569225 PTCH1Q13635 1447 aa13□□□□□ -0.33
CHD9-219ENST00000569225 CERKQ8TCT0 537 aa12.99□□□□□ -0.33
CHD9-219ENST00000569225 SETD1AO15047 1707 aaKnown RBP12.99□□□□□ -0.33
CHD9-219ENST00000569225 ASXL1Q8IXJ9 1541 aa12.99□□□□□ -0.33
CHD9-219ENST00000569225 LRRC7Q96NW7 1537 aa12.99□□□□□ -0.33
CHD9-219ENST00000569225 TECPR2O15040 1411 aa12.98□□□□□ -0.33
CHD9-219ENST00000569225 ROCK2O75116 1388 aaKnown RBP12.98□□□□□ -0.33
CHD9-219ENST00000569225 TMEM94Q12767 1356 aa12.98□□□□□ -0.33
CHD9-219ENST00000569225 NBPF8Q3BBV2 869 aa12.98□□□□□ -0.33
CHD9-219ENST00000569225 SIRT1Q96EB6 747 aa12.98□□□□□ -0.33
CHD9-219ENST00000569225 ADGRB1O14514 1584 aa12.98□□□□□ -0.33
CHD9-219ENST00000569225 NCOA3Q9Y6Q9 1424 aa12.98□□□□□ -0.33
CHD9-219ENST00000569225 XRN1Q8IZH2 1706 aaKnown RBP12.98□□□□□ -0.33
CHD9-219ENST00000569225 KIAA1210Q9ULL0 1709 aa12.98□□□□□ -0.33
CHD9-219ENST00000569225 C14orf37Q86TY3 774 aa12.97□□□□□ -0.33
CHD9-219ENST00000569225 CHD2O14647 1828 aaKnown RBP12.97□□□□□ -0.33
CHD9-219ENST00000569225 IQSEC2Q5JU85 1478 aa12.97□□□□□ -0.33
CHD9-219ENST00000569225 NBPF1Q3BBV0 1214 aa12.97□□□□□ -0.33
CHD9-219ENST00000569225 ROBO2Q9HCK4 1378 aa12.96□□□□□ -0.33
CHD9-219ENST00000569225 RALGAPBQ86X10 1494 aa12.96□□□□□ -0.33
CHD9-219ENST00000569225 FAM135BQ49AJ0 1406 aa12.96□□□□□ -0.33
CHD9-219ENST00000569225 TRAK1Q9UPV9 953 aa12.95□□□□□ -0.34
CHD9-219ENST00000569225 POGKQ9P215 609 aa12.95□□□□□ -0.34
CHD9-219ENST00000569225 DLC1Q96QB1 1528 aa12.95□□□□□ -0.34
CHD9-219ENST00000569225 MSH6P52701 1360 aa12.95□□□□□ -0.34
CHD9-219ENST00000569225 GPRASP1Q5JY77 1395 aa12.95□□□□□ -0.34
CHD9-219ENST00000569225 STRCP1A6NGW2 1772 aa12.94□□□□□ -0.34
CHD9-219ENST00000569225 CARD11Q9BXL7 1154 aa12.94□□□□□ -0.34
CHD9-219ENST00000569225 RBM33Q96EV2 1170 aaKnown RBP12.93□□□□□ -0.34
CHD9-219ENST00000569225 PRAM1Q96QH2 718 aa12.93□□□□□ -0.34
CHD9-219ENST00000569225 TRPM1Q7Z4N2 1603 aa12.93□□□□□ -0.34
CHD9-219ENST00000569225 EIF3AQ14152 1382 aaKnown RBP12.93□□□□□ -0.34
CHD9-219ENST00000569225 C19orf44Q9H6X5 657 aa12.93□□□□□ -0.34
CHD9-219ENST00000569225 WAPLQ7Z5K2 1190 aa12.92□□□□□ -0.34
CHD9-219ENST00000569225 POTEDQ86YR6 584 aa12.92□□□□□ -0.34
CHD9-219ENST00000569225 KNDC1Q76NI1 1749 aa12.92□□□□□ -0.34
CHD9-219ENST00000569225 ADGRL3Q9HAR2 1447 aa12.92□□□□□ -0.34
CHD9-219ENST00000569225 TOM1O60784 492 aa12.91□□□□□ -0.34
CHD9-219ENST00000569225 ATF3P18847 181 aa12.91□□□□□ -0.34
CHD9-219ENST00000569225 CADPS2Q86UW7 1296 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 384.2 ms