RNA–Protein interactions for RNA: ENST00000569204.1

EPB42-208, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 3

Gene EPB42, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-208ENST00000569204 KCNA6P17658 529 aa24.46■■□□□ 1.51
EPB42-208ENST00000569204 ZFYVE9O95405 1425 aa24.45■■□□□ 1.51
EPB42-208ENST00000569204 MED1Q15648 1581 aaPredicted RBP24.45■■□□□ 1.5
EPB42-208ENST00000569204 NUP155O75694 1391 aa24.43■■□□□ 1.5
EPB42-208ENST00000569204 BCANQ96GW7 911 aa24.43■■□□□ 1.5
EPB42-208ENST00000569204 RIMS2Q9UQ26 1411 aa24.43■■□□□ 1.5
EPB42-208ENST00000569204 NWD1Q149M9 1564 aa24.42■■□□□ 1.5
EPB42-208ENST00000569204 HDGFP51858 240 aaKnown RBP24.42■■□□□ 1.5
EPB42-208ENST00000569204 TMEM94Q12767 1356 aa24.42■■□□□ 1.5
EPB42-208ENST00000569204 PLEKHG1Q9ULL1 1385 aa24.41■■□□□ 1.5
EPB42-208ENST00000569204 CHGAP10645 457 aaKnown RBP24.4■■□□□ 1.5
EPB42-208ENST00000569204 NKTRP30414 1462 aaKnown RBP24.39■■□□□ 1.5
EPB42-208ENST00000569204 PPP1R15AO75807 674 aaPredicted RBP24.39■■□□□ 1.49
EPB42-208ENST00000569204 PROSER2Q86WR7 435 aaPredicted RBP24.39■■□□□ 1.49
EPB42-208ENST00000569204 SENP3Q9H4L4 574 aaPredicted RBP24.39■■□□□ 1.49
EPB42-208ENST00000569204 CHD2O14647 1828 aaKnown RBP24.39■■□□□ 1.49
EPB42-208ENST00000569204 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.36■■□□□ 1.49
EPB42-208ENST00000569204 RRBP1Q9P2E9 1410 aaKnown RBP24.35■■□□□ 1.49
EPB42-208ENST00000569204 RBM33Q96EV2 1170 aaKnown RBP24.34■■□□□ 1.49
EPB42-208ENST00000569204 SPHKAPQ2M3C7 1700 aa24.33■■□□□ 1.49
EPB42-208ENST00000569204 FAM135BQ49AJ0 1406 aa24.33■■□□□ 1.49
EPB42-208ENST00000569204 TBX22Q9Y458 520 aa24.32■■□□□ 1.48
EPB42-208ENST00000569204 NUTM2DQ5VT03 806 aaPredicted RBP24.3■■□□□ 1.48
EPB42-208ENST00000569204 ADAMTS13Q76LX8 1427 aa24.29■■□□□ 1.48
EPB42-208ENST00000569204 ROBO1Q9Y6N7 1651 aa24.29■■□□□ 1.48
EPB42-208ENST00000569204 DIP2AQ14689 1571 aa24.29■■□□□ 1.48
EPB42-208ENST00000569204 MSH6P52701 1360 aa24.29■■□□□ 1.48
EPB42-208ENST00000569204 PHF23Q9BUL5 403 aaPredicted RBP24.26■■□□□ 1.47
EPB42-208ENST00000569204 NAIPQ13075 1403 aa24.26■■□□□ 1.47
EPB42-208ENST00000569204 PIK3R4Q99570 1358 aa24.24■■□□□ 1.47
EPB42-208ENST00000569204 TRPM2O94759 1503 aa24.21■■□□□ 1.47
EPB42-208ENST00000569204 NCOA3Q9Y6Q9 1424 aa24.21■■□□□ 1.47
EPB42-208ENST00000569204 SLAIN2Q9P270 581 aa24.19■■□□□ 1.46
EPB42-208ENST00000569204 CLTCL1P53675 1640 aa24.19■■□□□ 1.46
EPB42-208ENST00000569204 NRXN3Q9Y4C0 1643 aa24.18■■□□□ 1.46
EPB42-208ENST00000569204 KIF1BO60333 1816 aa24.17■■□□□ 1.46
EPB42-208ENST00000569204 ZNF326Q5BKZ1 582 aaKnown RBP24.17■■□□□ 1.46
EPB42-208ENST00000569204 SETBP1Q9Y6X0 1596 aa24.16■■□□□ 1.46
EPB42-208ENST00000569204 HFM1A2PYH4 1435 aa24.16■■□□□ 1.46
EPB42-208ENST00000569204 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.15■■□□□ 1.46
EPB42-208ENST00000569204 C14orf37Q86TY3 774 aa24.15■■□□□ 1.46
EPB42-208ENST00000569204 AMOTL2Q9Y2J4 779 aa24.15■■□□□ 1.46
EPB42-208ENST00000569204 PTPRUQ92729 1446 aa24.15■■□□□ 1.46
EPB42-208ENST00000569204 PHLPP1O60346 1717 aa24.15■■□□□ 1.46
EPB42-208ENST00000569204 NEXMIFQ5QGS0 1516 aa24.12■■□□□ 1.45
EPB42-208ENST00000569204 TRIM52Q96A61 297 aa24.12■■□□□ 1.45
EPB42-208ENST00000569204 C19orf44Q9H6X5 657 aa24.12■■□□□ 1.45
EPB42-208ENST00000569204 XRN1Q8IZH2 1706 aaKnown RBP24.12■■□□□ 1.45
EPB42-208ENST00000569204 CADPS2Q86UW7 1296 aa24.1■■□□□ 1.45
EPB42-208ENST00000569204 RGS17Q9UGC6 210 aaPredicted RBP24.09■■□□□ 1.45
EPB42-208ENST00000569204 ATF3P18847 181 aa24.08■■□□□ 1.45
EPB42-208ENST00000569204 COL16A1Q07092 1604 aaPredicted RBP24.06■■□□□ 1.44
EPB42-208ENST00000569204 METP08581 1390 aa24.06■■□□□ 1.44
EPB42-208ENST00000569204 SLC4A1APQ9BWU0 796 aaKnown RBP24.05■■□□□ 1.44
EPB42-208ENST00000569204 JCADQ9P266 1359 aa24.04■■□□□ 1.44
EPB42-208ENST00000569204 DCCP43146 1447 aa24.02■■□□□ 1.44
EPB42-208ENST00000569204 AHDC1Q5TGY3 1603 aaPredicted RBP24.02■■□□□ 1.44
EPB42-208ENST00000569204 SETD1AO15047 1707 aaKnown RBP23.99■■□□□ 1.43
EPB42-208ENST00000569204 VGFO15240 615 aaPredicted RBP23.98■■□□□ 1.43
EPB42-208ENST00000569204 PPLO60437 1756 aa23.98■■□□□ 1.43
EPB42-208ENST00000569204 RPGRIP1LQ68CZ1 1315 aa23.97■■□□□ 1.43
EPB42-208ENST00000569204 BRINP3Q76B58 766 aa23.96■■□□□ 1.43
EPB42-208ENST00000569204 NALCNQ8IZF0 1738 aa23.96■■□□□ 1.43
EPB42-208ENST00000569204 POTEAQ6S8J7 498 aa23.95■■□□□ 1.42
EPB42-208ENST00000569204 SHPRHQ149N8 1683 aa23.95■■□□□ 1.42
EPB42-208ENST00000569204 MST1RQ04912 1400 aa23.94■■□□□ 1.42
EPB42-208ENST00000569204 ADGRL3Q9HAR2 1447 aa23.94■■□□□ 1.42
EPB42-208ENST00000569204 FOXD1Q16676 465 aa23.93■■□□□ 1.42
EPB42-208ENST00000569204 ASXL1Q8IXJ9 1541 aa23.93■■□□□ 1.42
EPB42-208ENST00000569204 SPATA31A6Q5VVP1 1343 aa23.92■■□□□ 1.42
EPB42-208ENST00000569204 NHSL1Q5SYE7 1610 aa23.92■■□□□ 1.42
EPB42-208ENST00000569204 LRP6O75581 1613 aa23.9■■□□□ 1.42
EPB42-208ENST00000569204 PTCH1Q13635 1447 aa23.9■■□□□ 1.42
EPB42-208ENST00000569204 CCDC144AA2RUR9 1427 aa23.88■■□□□ 1.41
EPB42-208ENST00000569204 MPHOSPH9Q99550 1183 aa23.88■■□□□ 1.41
EPB42-208ENST00000569204 PRAG1Q86YV5 1406 aa23.86■■□□□ 1.41
EPB42-208ENST00000569204 ROBO2Q9HCK4 1378 aa23.86■■□□□ 1.41
EPB42-208ENST00000569204 SETD5Q9C0A6 1442 aa23.84■■□□□ 1.41
EPB42-208ENST00000569204 IFT172Q9UG01 1749 aa23.84■■□□□ 1.41
EPB42-208ENST00000569204 MEX3CQ5U5Q3 659 aaKnown RBP23.84■■□□□ 1.41
EPB42-208ENST00000569204 SPATA31E1Q6ZUB1 1445 aa23.84■■□□□ 1.41
EPB42-208ENST00000569204 C1orf167Q5SNV9 1468 aa23.81■■□□□ 1.4
EPB42-208ENST00000569204 RGL3Q3MIN7 710 aa23.81■■□□□ 1.4
EPB42-208ENST00000569204 ADGRF5Q8IZF2 1346 aa23.81■■□□□ 1.4
EPB42-208ENST00000569204 ACIN1Q9UKV3 1341 aaKnown RBP23.81■■□□□ 1.4
EPB42-208ENST00000569204 LRRC59Q96AG4 307 aaKnown RBP23.8■■□□□ 1.4
EPB42-208ENST00000569204 DDX17Q92841 729 aaKnown RBP23.79■■□□□ 1.4
EPB42-208ENST00000569204 ANKRD30BQ9BXX2 1392 aa23.78■■□□□ 1.4
EPB42-208ENST00000569204 NUTM2BA6NNL0 878 aaPredicted RBP23.78■■□□□ 1.4
EPB42-208ENST00000569204 NUTM2EB1AL46 878 aaPredicted RBP23.78■■□□□ 1.4
EPB42-208ENST00000569204 NUTM2AQ8IVF1 878 aaPredicted RBP23.78■■□□□ 1.4
EPB42-208ENST00000569204 LAMC1P11047 1609 aa23.77■■□□□ 1.4
EPB42-208ENST00000569204 ZNF772Q68DY9 489 aaPredicted RBP23.77■■□□□ 1.4
EPB42-208ENST00000569204 ORAI2Q96SN7 254 aa23.73■■□□□ 1.39
EPB42-208ENST00000569204 PNPLA6Q8IY17 1366 aa23.73■■□□□ 1.39
EPB42-208ENST00000569204 TECPR2O15040 1411 aa23.72■■□□□ 1.39
EPB42-208ENST00000569204 PIK3C2GO75747 1445 aa23.72■■□□□ 1.39
EPB42-208ENST00000569204 CDC42BPGQ6DT37 1551 aa23.72■■□□□ 1.39
EPB42-208ENST00000569204 KNDC1Q76NI1 1749 aa23.72■■□□□ 1.39
EPB42-208ENST00000569204 LRPPRCP42704 1394 aaKnown RBP23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms