RNA–Protein interactions for RNA: ENST00000569124.1

SCAMP2-210, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 4

Gene SCAMP2, Length 538 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-210ENST00000569124 TMEM131LA2VDJ0 1609 aa23.74■■□□□ 1.39
SCAMP2-210ENST00000569124 KCNA6P17658 529 aa23.74■■□□□ 1.39
SCAMP2-210ENST00000569124 SLC26A8Q96RN1 970 aa23.73■■□□□ 1.39
SCAMP2-210ENST00000569124 ANKRD50Q9ULJ7 1429 aa23.73■■□□□ 1.39
SCAMP2-210ENST00000569124 E9PCH4 1651 aa23.73■■□□□ 1.39
SCAMP2-210ENST00000569124 SLC52A1Q9NWF4 448 aa23.71■■□□□ 1.39
SCAMP2-210ENST00000569124 PROSER2Q86WR7 435 aaPredicted RBP23.7■■□□□ 1.38
SCAMP2-210ENST00000569124 FAM50AQ14320 339 aaKnown RBP23.69■■□□□ 1.38
SCAMP2-210ENST00000569124 BCANQ96GW7 911 aa23.69■■□□□ 1.38
SCAMP2-210ENST00000569124 ZFYVE9O95405 1425 aa23.68■■□□□ 1.38
SCAMP2-210ENST00000569124 IQGAP3Q86VI3 1631 aa23.68■■□□□ 1.38
SCAMP2-210ENST00000569124 MSH6P52701 1360 aa23.67■■□□□ 1.38
SCAMP2-210ENST00000569124 PLEKHG1Q9ULL1 1385 aa23.65■■□□□ 1.38
SCAMP2-210ENST00000569124 DIP2AQ14689 1571 aa23.65■■□□□ 1.38
SCAMP2-210ENST00000569124 RIMS2Q9UQ26 1411 aa23.65■■□□□ 1.38
SCAMP2-210ENST00000569124 RBM33Q96EV2 1170 aaKnown RBP23.64■■□□□ 1.37
SCAMP2-210ENST00000569124 PPP1R15AO75807 674 aaPredicted RBP23.63■■□□□ 1.37
SCAMP2-210ENST00000569124 PPARGC1BQ86YN6 1023 aaKnown RBP23.63■■□□□ 1.37
SCAMP2-210ENST00000569124 RGS17Q9UGC6 210 aaPredicted RBP23.63■■□□□ 1.37
SCAMP2-210ENST00000569124 SETD1AO15047 1707 aaKnown RBP23.62■■□□□ 1.37
SCAMP2-210ENST00000569124 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.62■■□□□ 1.37
SCAMP2-210ENST00000569124 COL16A1Q07092 1604 aaPredicted RBP23.61■■□□□ 1.37
SCAMP2-210ENST00000569124 SPHKAPQ2M3C7 1700 aa23.59■■□□□ 1.37
SCAMP2-210ENST00000569124 HDGFP51858 240 aaKnown RBP23.59■■□□□ 1.37
SCAMP2-210ENST00000569124 TRPM2O94759 1503 aa23.55■■□□□ 1.36
SCAMP2-210ENST00000569124 SHPRHQ149N8 1683 aa23.55■■□□□ 1.36
SCAMP2-210ENST00000569124 CHGAP10645 457 aaKnown RBP23.54■■□□□ 1.36
SCAMP2-210ENST00000569124 SLAIN2Q9P270 581 aa23.54■■□□□ 1.36
SCAMP2-210ENST00000569124 ROCK1Q13464 1354 aa23.53■■□□□ 1.36
SCAMP2-210ENST00000569124 NCOA3Q9Y6Q9 1424 aa23.53■■□□□ 1.36
SCAMP2-210ENST00000569124 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.53■■□□□ 1.36
SCAMP2-210ENST00000569124 JCADQ9P266 1359 aa23.52■■□□□ 1.36
SCAMP2-210ENST00000569124 AHDC1Q5TGY3 1603 aaPredicted RBP23.51■■□□□ 1.35
SCAMP2-210ENST00000569124 ADAMTS13Q76LX8 1427 aa23.51■■□□□ 1.35
SCAMP2-210ENST00000569124 POTEAQ6S8J7 498 aa23.51■■□□□ 1.35
SCAMP2-210ENST00000569124 C14orf37Q86TY3 774 aa23.5■■□□□ 1.35
SCAMP2-210ENST00000569124 TBX22Q9Y458 520 aa23.5■■□□□ 1.35
SCAMP2-210ENST00000569124 NRXN3Q9Y4C0 1643 aa23.49■■□□□ 1.35
SCAMP2-210ENST00000569124 XRN1Q8IZH2 1706 aaKnown RBP23.49■■□□□ 1.35
SCAMP2-210ENST00000569124 PIK3R4Q99570 1358 aa23.49■■□□□ 1.35
SCAMP2-210ENST00000569124 KIF1BO60333 1816 aa23.47■■□□□ 1.35
SCAMP2-210ENST00000569124 NUTM2DQ5VT03 806 aaPredicted RBP23.45■■□□□ 1.34
SCAMP2-210ENST00000569124 SETBP1Q9Y6X0 1596 aa23.44■■□□□ 1.34
SCAMP2-210ENST00000569124 NUP155O75694 1391 aa23.43■■□□□ 1.34
SCAMP2-210ENST00000569124 LRP6O75581 1613 aa23.43■■□□□ 1.34
SCAMP2-210ENST00000569124 NHSL1Q5SYE7 1610 aa23.42■■□□□ 1.34
SCAMP2-210ENST00000569124 CADPS2Q86UW7 1296 aa23.42■■□□□ 1.34
SCAMP2-210ENST00000569124 SPATA31A6Q5VVP1 1343 aa23.4■■□□□ 1.34
SCAMP2-210ENST00000569124 ATF3P18847 181 aa23.4■■□□□ 1.34
SCAMP2-210ENST00000569124 C19orf44Q9H6X5 657 aa23.39■■□□□ 1.33
SCAMP2-210ENST00000569124 DCCP43146 1447 aa23.39■■□□□ 1.33
SCAMP2-210ENST00000569124 NALCNQ8IZF0 1738 aa23.39■■□□□ 1.33
SCAMP2-210ENST00000569124 CLTCL1P53675 1640 aa23.38■■□□□ 1.33
SCAMP2-210ENST00000569124 PTPRUQ92729 1446 aa23.38■■□□□ 1.33
SCAMP2-210ENST00000569124 MEX3CQ5U5Q3 659 aaKnown RBP23.37■■□□□ 1.33
SCAMP2-210ENST00000569124 ITGAEP38570 1179 aa23.36■■□□□ 1.33
SCAMP2-210ENST00000569124 ASXL1Q8IXJ9 1541 aa23.36■■□□□ 1.33
SCAMP2-210ENST00000569124 AMOTL2Q9Y2J4 779 aa23.35■■□□□ 1.33
SCAMP2-210ENST00000569124 NEXMIFQ5QGS0 1516 aa23.33■■□□□ 1.33
SCAMP2-210ENST00000569124 RRBP1Q9P2E9 1410 aaKnown RBP23.33■■□□□ 1.32
SCAMP2-210ENST00000569124 ZNF772Q68DY9 489 aaPredicted RBP23.3■■□□□ 1.32
SCAMP2-210ENST00000569124 MST1RQ04912 1400 aa23.29■■□□□ 1.32
SCAMP2-210ENST00000569124 ZNF326Q5BKZ1 582 aaKnown RBP23.29■■□□□ 1.32
SCAMP2-210ENST00000569124 BRINP3Q76B58 766 aa23.29■■□□□ 1.32
SCAMP2-210ENST00000569124 ADGRL3Q9HAR2 1447 aa23.26■■□□□ 1.31
SCAMP2-210ENST00000569124 PPLO60437 1756 aa23.25■■□□□ 1.31
SCAMP2-210ENST00000569124 SETD5Q9C0A6 1442 aa23.25■■□□□ 1.31
SCAMP2-210ENST00000569124 METP08581 1390 aa23.24■■□□□ 1.31
SCAMP2-210ENST00000569124 LAMC1P11047 1609 aa23.22■■□□□ 1.31
SCAMP2-210ENST00000569124 NUTM2BA6NNL0 878 aaPredicted RBP23.22■■□□□ 1.31
SCAMP2-210ENST00000569124 NUTM2EB1AL46 878 aaPredicted RBP23.22■■□□□ 1.31
SCAMP2-210ENST00000569124 NUTM2AQ8IVF1 878 aaPredicted RBP23.22■■□□□ 1.31
SCAMP2-210ENST00000569124 TRIM52Q96A61 297 aa23.22■■□□□ 1.31
SCAMP2-210ENST00000569124 CDK12Q9NYV4 1490 aaPredicted RBP23.21■■□□□ 1.31
SCAMP2-210ENST00000569124 TRIM26Q12899 539 aaPredicted RBP23.18■■□□□ 1.3
SCAMP2-210ENST00000569124 RXRBP28702 533 aa23.17■■□□□ 1.3
SCAMP2-210ENST00000569124 PTCH1Q13635 1447 aa23.16■■□□□ 1.3
SCAMP2-210ENST00000569124 AFF2P51816 1311 aa23.16■■□□□ 1.3
SCAMP2-210ENST00000569124 NAIPQ13075 1403 aa23.16■■□□□ 1.3
SCAMP2-210ENST00000569124 LRRC59Q96AG4 307 aaKnown RBP23.15■■□□□ 1.3
SCAMP2-210ENST00000569124 PNPLA6Q8IY17 1366 aa23.14■■□□□ 1.3
SCAMP2-210ENST00000569124 UPF1Q92900 1129 aaKnown RBP eCLIP23.14■■□□□ 1.29
SCAMP2-210ENST00000569124 MARF1Q9Y4F3 1742 aaKnown RBP23.13■■□□□ 1.29
SCAMP2-210ENST00000569124 C1orf167Q5SNV9 1468 aa23.12■■□□□ 1.29
SCAMP2-210ENST00000569124 DDX17Q92841 729 aaKnown RBP23.1■■□□□ 1.29
SCAMP2-210ENST00000569124 COL22A1Q8NFW1 1626 aaPredicted RBP23.1■■□□□ 1.29
SCAMP2-210ENST00000569124 IFT172Q9UG01 1749 aa23.1■■□□□ 1.29
SCAMP2-210ENST00000569124 PRAG1Q86YV5 1406 aa23.09■■□□□ 1.29
SCAMP2-210ENST00000569124 C8orf37Q96NL8 207 aa23.09■■□□□ 1.29
SCAMP2-210ENST00000569124 RGS12O14924 1447 aa23.08■■□□□ 1.28
SCAMP2-210ENST00000569124 CDC42BPGQ6DT37 1551 aa23.07■■□□□ 1.28
SCAMP2-210ENST00000569124 HFM1A2PYH4 1435 aa23.07■■□□□ 1.28
SCAMP2-210ENST00000569124 ROBO2Q9HCK4 1378 aa23.06■■□□□ 1.28
SCAMP2-210ENST00000569124 VGFO15240 615 aaPredicted RBP23.06■■□□□ 1.28
SCAMP2-210ENST00000569124 KNDC1Q76NI1 1749 aa23.05■■□□□ 1.28
SCAMP2-210ENST00000569124 RBM6P78332 1123 aaKnown RBP23.02■■□□□ 1.28
SCAMP2-210ENST00000569124 RPGRIP1LQ68CZ1 1315 aa23.02■■□□□ 1.28
SCAMP2-210ENST00000569124 QTRT2Q9H974 415 aaKnown RBP23■■□□□ 1.27
SCAMP2-210ENST00000569124 ADAMTS2O95450 1211 aa22.99■■□□□ 1.27
SCAMP2-210ENST00000569124 NGLY1Q96IV0 654 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms