RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 SLC24A3Q9HC58 644 aa7.88□□□□□ -1.15
HMGB1P6-201ENST00000569046 WBP1LQ9NX94 342 aa7.86□□□□□ -1.15
HMGB1P6-201ENST00000569046 HPS5Q9UPZ3 1129 aa7.86□□□□□ -1.15
HMGB1P6-201ENST00000569046 RNF40O75150 1001 aa7.85□□□□□ -1.15
HMGB1P6-201ENST00000569046 HDGFP51858 240 aaKnown RBP7.84□□□□□ -1.15
HMGB1P6-201ENST00000569046 TPRNQ4KMQ1 711 aa7.84□□□□□ -1.15
HMGB1P6-201ENST00000569046 REPIN1Q9BWE0 567 aaKnown RBP7.84□□□□□ -1.15
HMGB1P6-201ENST00000569046 HCSTQ9UBK5 93 aa7.84□□□□□ -1.15
HMGB1P6-201ENST00000569046 TSR3Q9UJK0 312 aaKnown RBP7.84□□□□□ -1.15
HMGB1P6-201ENST00000569046 TRIM66O15016 1216 aa7.83□□□□□ -1.16
HMGB1P6-201ENST00000569046 MDM2Q00987 491 aaPredicted RBP7.83□□□□□ -1.16
HMGB1P6-201ENST00000569046 AK7Q96M32 723 aa7.83□□□□□ -1.16
HMGB1P6-201ENST00000569046 DAXXQ9UER7 740 aaPredicted RBP7.83□□□□□ -1.16
HMGB1P6-201ENST00000569046 SLC10A3P09131 477 aa7.82□□□□□ -1.16
HMGB1P6-201ENST00000569046 SLF2Q8IX21 1173 aa7.82□□□□□ -1.16
HMGB1P6-201ENST00000569046 PPP4CP60510 307 aa7.81□□□□□ -1.16
HMGB1P6-201ENST00000569046 TMUB1Q9BVT8 246 aa7.81□□□□□ -1.16
HMGB1P6-201ENST00000569046 PRKCSHP14314 528 aaPredicted RBP7.8□□□□□ -1.16
HMGB1P6-201ENST00000569046 AMHR2Q16671 573 aa7.8□□□□□ -1.16
HMGB1P6-201ENST00000569046 DDX11L8A8MPP1 907 aa7.79□□□□□ -1.16
HMGB1P6-201ENST00000569046 APLP1P51693 650 aa7.79□□□□□ -1.16
HMGB1P6-201ENST00000569046 GPCPD1Q9NPB8 672 aa7.78□□□□□ -1.16
HMGB1P6-201ENST00000569046 CLCN1P35523 988 aa7.77□□□□□ -1.17
HMGB1P6-201ENST00000569046 PDE4DQ08499 809 aa7.77□□□□□ -1.17
HMGB1P6-201ENST00000569046 PARP9Q8IXQ6 854 aa7.77□□□□□ -1.17
HMGB1P6-201ENST00000569046 FAM217BQ9NTX9 383 aaPredicted RBP7.77□□□□□ -1.17
HMGB1P6-201ENST00000569046 CFHP08603 1231 aa7.76□□□□□ -1.17
HMGB1P6-201ENST00000569046 SLC4A3P48751 1232 aa7.76□□□□□ -1.17
HMGB1P6-201ENST00000569046 TTLL12Q14166 644 aaPredicted RBP7.76□□□□□ -1.17
HMGB1P6-201ENST00000569046 RDH13Q8NBN7 331 aa7.76□□□□□ -1.17
HMGB1P6-201ENST00000569046 CD46P15529 392 aa7.75□□□□□ -1.17
HMGB1P6-201ENST00000569046 GIGYF2Q6Y7W6 1299 aaKnown RBP7.75□□□□□ -1.17
HMGB1P6-201ENST00000569046 NYAP1Q6ZVC0 841 aa7.75□□□□□ -1.17
HMGB1P6-201ENST00000569046 SULF1Q8IWU6 871 aa7.74□□□□□ -1.17
HMGB1P6-201ENST00000569046 SSTR3P32745 418 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P6-201ENST00000569046 NECTIN2Q92692 538 aa7.73□□□□□ -1.17
HMGB1P6-201ENST00000569046 MS4A1P11836 297 aa7.72□□□□□ -1.17
HMGB1P6-201ENST00000569046 GCGRP47871 477 aa7.72□□□□□ -1.17
HMGB1P6-201ENST00000569046 ACTN4O43707 911 aaKnown RBP7.71□□□□□ -1.18
HMGB1P6-201ENST00000569046 KMT5BQ4FZB7 885 aa7.71□□□□□ -1.18
HMGB1P6-201ENST00000569046 TJAP1Q5JTD0 557 aa7.71□□□□□ -1.18
HMGB1P6-201ENST00000569046 FUT2Q10981 343 aa7.7□□□□□ -1.18
HMGB1P6-201ENST00000569046 RSPH4AQ5TD94 716 aa7.7□□□□□ -1.18
HMGB1P6-201ENST00000569046 BLOC1S3Q6QNY0 202 aa7.7□□□□□ -1.18
HMGB1P6-201ENST00000569046 MTRQ99707 1265 aa7.7□□□□□ -1.18
HMGB1P6-201ENST00000569046 GPBP1L1Q9HC44 474 aaPredicted RBP7.7□□□□□ -1.18
HMGB1P6-201ENST00000569046 ITGBL1O95965 494 aaPredicted RBP7.69□□□□□ -1.18
HMGB1P6-201ENST00000569046 COPS2P61201 443 aa7.69□□□□□ -1.18
HMGB1P6-201ENST00000569046 PUS10Q3MIT2 529 aaKnown RBP7.69□□□□□ -1.18
HMGB1P6-201ENST00000569046 ZNF516Q92618 1163 aa7.69□□□□□ -1.18
HMGB1P6-201ENST00000569046 PRR14Q9BWN1 585 aa7.69□□□□□ -1.18
HMGB1P6-201ENST00000569046 PLA2G2EQ9NZK7 142 aa7.69□□□□□ -1.18
HMGB1P6-201ENST00000569046 PCDHB3Q9Y5E6 796 aa7.69□□□□□ -1.18
HMGB1P6-201ENST00000569046 BEGAINQ9BUH8 593 aa7.67□□□□□ -1.18
HMGB1P6-201ENST00000569046 KDM4AO75164 1064 aa7.66□□□□□ -1.18
HMGB1P6-201ENST00000569046 HLA-CQ95604 372 aa7.66□□□□□ -1.18
HMGB1P6-201ENST00000569046 KDM4CQ9H3R0 1056 aa7.66□□□□□ -1.18
HMGB1P6-201ENST00000569046 IL21Q9HBE4 155 aa7.66□□□□□ -1.18
HMGB1P6-201ENST00000569046 ATP6V1AP38606 617 aa7.65□□□□□ -1.18
HMGB1P6-201ENST00000569046 KCNC4Q03721 635 aa7.65□□□□□ -1.18
HMGB1P6-201ENST00000569046 MORN1Q5T089 497 aa7.65□□□□□ -1.18
HMGB1P6-201ENST00000569046 NKX2-3Q8TAU0 364 aa7.65□□□□□ -1.18
HMGB1P6-201ENST00000569046 ZPR1O75312 459 aa7.64□□□□□ -1.19
HMGB1P6-201ENST00000569046 BRPF1P55201 1214 aaPredicted RBP7.64□□□□□ -1.19
HMGB1P6-201ENST00000569046 SCUBE3Q8IX30 993 aa7.64□□□□□ -1.19
HMGB1P6-201ENST00000569046 SPIRE2Q8WWL2 714 aa7.64□□□□□ -1.19
HMGB1P6-201ENST00000569046 HOXA2O43364 376 aa7.63□□□□□ -1.19
HMGB1P6-201ENST00000569046 TLL1O43897 1013 aa7.63□□□□□ -1.19
HMGB1P6-201ENST00000569046 GUCA2AQ02747 115 aa7.63□□□□□ -1.19
HMGB1P6-201ENST00000569046 NEUROD2Q15784 382 aa7.63□□□□□ -1.19
HMGB1P6-201ENST00000569046 IFFO2Q5TF58 517 aa7.63□□□□□ -1.19
HMGB1P6-201ENST00000569046 FAM117AQ9C073 453 aa7.63□□□□□ -1.19
HMGB1P6-201ENST00000569046 SLC27A5Q9Y2P5 690 aa7.63□□□□□ -1.19
HMGB1P6-201ENST00000569046 NUTM1Q86Y26 1132 aa7.62□□□□□ -1.19
HMGB1P6-201ENST00000569046 NR1I2O75469 434 aa7.61□□□□□ -1.19
HMGB1P6-201ENST00000569046 NDUFV2P19404 249 aa7.61□□□□□ -1.19
HMGB1P6-201ENST00000569046 TBC1D2Q9BYX2 928 aa7.61□□□□□ -1.19
HMGB1P6-201ENST00000569046 PLEKHG3A1L390 1219 aa7.6□□□□□ -1.19
HMGB1P6-201ENST00000569046 MOXD2PA6NHM9 499 aa7.6□□□□□ -1.19
HMGB1P6-201ENST00000569046 USP46P62068 366 aa7.6□□□□□ -1.19
HMGB1P6-201ENST00000569046 RNF19BQ6ZMZ0 732 aa7.6□□□□□ -1.19
HMGB1P6-201ENST00000569046 THAP11Q96EK4 314 aa7.6□□□□□ -1.19
HMGB1P6-201ENST00000569046 PCDHGC3Q9UN70 934 aa7.59□□□□□ -1.19
HMGB1P6-201ENST00000569046 GRIPAP1Q4V328 841 aa7.58□□□□□ -1.2
HMGB1P6-201ENST00000569046 A0A0G2JS52 829 aa7.57□□□□□ -1.2
HMGB1P6-201ENST00000569046 MYSM1Q5VVJ2 828 aa7.57□□□□□ -1.2
HMGB1P6-201ENST00000569046 BRICD5Q6PL45 260 aa7.57□□□□□ -1.2
HMGB1P6-201ENST00000569046 SYMPKQ92797 1274 aaKnown RBP7.57□□□□□ -1.2
HMGB1P6-201ENST00000569046 SPSB2Q99619 263 aa7.57□□□□□ -1.2
HMGB1P6-201ENST00000569046 ADH1BP00325 375 aa7.56□□□□□ -1.2
HMGB1P6-201ENST00000569046 FDX1P10109 184 aa7.56□□□□□ -1.2
HMGB1P6-201ENST00000569046 RSBN1LQ6PCB5 846 aaPredicted RBP7.56□□□□□ -1.2
HMGB1P6-201ENST00000569046 LIMD1Q9UGP4 676 aa7.56□□□□□ -1.2
HMGB1P6-201ENST00000569046 SALL2Q9Y467 1007 aaPredicted RBP7.56□□□□□ -1.2
HMGB1P6-201ENST00000569046 PPP1R18Q6NYC8 613 aa7.55□□□□□ -1.2
HMGB1P6-201ENST00000569046 FAM160A2Q8N612 972 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P6-201ENST00000569046 IL27Q8NEV9 243 aa7.55□□□□□ -1.2
HMGB1P6-201ENST00000569046 PCDHB15Q9Y5E8 787 aa7.55□□□□□ -1.2
HMGB1P6-201ENST00000569046 SPTLC1O15269 473 aa7.54□□□□□ -1.2
HMGB1P6-201ENST00000569046 FMNL1O95466 1100 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms