RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 FGD6Q6ZV73 1430 aa19.58■□□□□ 0.72
SNX29-207ENST00000568949 LOC105371045A0A1W2PR82 267 aa19.57■□□□□ 0.72
SNX29-207ENST00000568949 BCANQ96GW7 911 aa19.57■□□□□ 0.72
SNX29-207ENST00000568949 CHD2O14647 1828 aaKnown RBP19.56■□□□□ 0.72
SNX29-207ENST00000568949 PLEKHG1Q9ULL1 1385 aa19.56■□□□□ 0.72
SNX29-207ENST00000568949 RPRD2Q5VT52 1461 aaKnown RBP19.55■□□□□ 0.72
SNX29-207ENST00000568949 ZFYVE9O95405 1425 aa19.55■□□□□ 0.72
SNX29-207ENST00000568949 HDGFP51858 240 aaKnown RBP19.55■□□□□ 0.72
SNX29-207ENST00000568949 CHIC2Q9UKJ5 165 aa19.55■□□□□ 0.72
SNX29-207ENST00000568949 NCOA3Q9Y6Q9 1424 aa19.55■□□□□ 0.72
SNX29-207ENST00000568949 APLP2Q06481 763 aa19.54■□□□□ 0.72
SNX29-207ENST00000568949 SETD1AO15047 1707 aaKnown RBP19.54■□□□□ 0.72
SNX29-207ENST00000568949 COL16A1Q07092 1604 aaPredicted RBP19.52■□□□□ 0.72
SNX29-207ENST00000568949 TBX22Q9Y458 520 aa19.52■□□□□ 0.72
SNX29-207ENST00000568949 ADGRL2O95490 1459 aa19.52■□□□□ 0.72
SNX29-207ENST00000568949 SPATA31A6Q5VVP1 1343 aa19.51■□□□□ 0.71
SNX29-207ENST00000568949 MYO5BQ9ULV0 1848 aa19.51■□□□□ 0.71
SNX29-207ENST00000568949 RIMS2Q9UQ26 1411 aa19.51■□□□□ 0.71
SNX29-207ENST00000568949 PPP1R15AO75807 674 aaPredicted RBP19.5■□□□□ 0.71
SNX29-207ENST00000568949 TMEM131LA2VDJ0 1609 aa19.48■□□□□ 0.71
SNX29-207ENST00000568949 ZNF772Q68DY9 489 aaPredicted RBP19.48■□□□□ 0.71
SNX29-207ENST00000568949 GCC2Q8IWJ2 1684 aa19.47■□□□□ 0.71
SNX29-207ENST00000568949 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.47■□□□□ 0.71
SNX29-207ENST00000568949 LRP6O75581 1613 aa19.47■□□□□ 0.71
SNX29-207ENST00000568949 ANKRD50Q9ULJ7 1429 aa19.46■□□□□ 0.71
SNX29-207ENST00000568949 CADPS2Q86UW7 1296 aa19.46■□□□□ 0.71
SNX29-207ENST00000568949 AHDC1Q5TGY3 1603 aaPredicted RBP19.46■□□□□ 0.71
SNX29-207ENST00000568949 PIK3R4Q99570 1358 aa19.45■□□□□ 0.7
SNX29-207ENST00000568949 MEX3CQ5U5Q3 659 aaKnown RBP19.45■□□□□ 0.7
SNX29-207ENST00000568949 C14orf37Q86TY3 774 aa19.45■□□□□ 0.7
SNX29-207ENST00000568949 C19orf44Q9H6X5 657 aa19.45■□□□□ 0.7
SNX29-207ENST00000568949 SHPRHQ149N8 1683 aa19.44■□□□□ 0.7
SNX29-207ENST00000568949 UPF1Q92900 1129 aaKnown RBP eCLIP19.44■□□□□ 0.7
SNX29-207ENST00000568949 DIP2AQ14689 1571 aa19.44■□□□□ 0.7
SNX29-207ENST00000568949 ADAMTS13Q76LX8 1427 aa19.43■□□□□ 0.7
SNX29-207ENST00000568949 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.43■□□□□ 0.7
SNX29-207ENST00000568949 ATF3P18847 181 aa19.43■□□□□ 0.7
SNX29-207ENST00000568949 CHGAP10645 457 aaKnown RBP19.39■□□□□ 0.69
SNX29-207ENST00000568949 TRIM52Q96A61 297 aa19.39■□□□□ 0.69
SNX29-207ENST00000568949 RXRBP28702 533 aa19.38■□□□□ 0.69
SNX29-207ENST00000568949 UNC13BO14795 1591 aa19.37■□□□□ 0.69
SNX29-207ENST00000568949 CDK12Q9NYV4 1490 aaPredicted RBP19.37■□□□□ 0.69
SNX29-207ENST00000568949 FAM50AQ14320 339 aaKnown RBP19.37■□□□□ 0.69
SNX29-207ENST00000568949 TRPM2O94759 1503 aa19.36■□□□□ 0.69
SNX29-207ENST00000568949 NUTM2DQ5VT03 806 aaPredicted RBP19.36■□□□□ 0.69
SNX29-207ENST00000568949 BRINP3Q76B58 766 aa19.36■□□□□ 0.69
SNX29-207ENST00000568949 DCCP43146 1447 aa19.35■□□□□ 0.69
SNX29-207ENST00000568949 AMOTL2Q9Y2J4 779 aa19.35■□□□□ 0.69
SNX29-207ENST00000568949 E9PCH4 1651 aa19.35■□□□□ 0.69
SNX29-207ENST00000568949 PTPRUQ92729 1446 aa19.33■□□□□ 0.68
SNX29-207ENST00000568949 SETD5Q9C0A6 1442 aa19.32■□□□□ 0.68
SNX29-207ENST00000568949 NUTM2BA6NNL0 878 aaPredicted RBP19.31■□□□□ 0.68
SNX29-207ENST00000568949 NUTM2EB1AL46 878 aaPredicted RBP19.31■□□□□ 0.68
SNX29-207ENST00000568949 NUTM2AQ8IVF1 878 aaPredicted RBP19.31■□□□□ 0.68
SNX29-207ENST00000568949 ASXL1Q8IXJ9 1541 aa19.3■□□□□ 0.68
SNX29-207ENST00000568949 IQGAP3Q86VI3 1631 aa19.3■□□□□ 0.68
SNX29-207ENST00000568949 AFF2P51816 1311 aa19.29■□□□□ 0.68
SNX29-207ENST00000568949 XRN1Q8IZH2 1706 aaKnown RBP19.28■□□□□ 0.68
SNX29-207ENST00000568949 LRRC59Q96AG4 307 aaKnown RBP19.28■□□□□ 0.68
SNX29-207ENST00000568949 ROCK1Q13464 1354 aa19.28■□□□□ 0.68
SNX29-207ENST00000568949 MST1RQ04912 1400 aa19.27■□□□□ 0.68
SNX29-207ENST00000568949 NHSL1Q5SYE7 1610 aa19.27■□□□□ 0.68
SNX29-207ENST00000568949 SETBP1Q9Y6X0 1596 aa19.26■□□□□ 0.67
SNX29-207ENST00000568949 NRXN3Q9Y4C0 1643 aa19.25■□□□□ 0.67
SNX29-207ENST00000568949 NUP155O75694 1391 aa19.24■□□□□ 0.67
SNX29-207ENST00000568949 RBM6P78332 1123 aaKnown RBP19.23■□□□□ 0.67
SNX29-207ENST00000568949 QTRT2Q9H974 415 aaKnown RBP19.22■□□□□ 0.67
SNX29-207ENST00000568949 RGS12O14924 1447 aa19.22■□□□□ 0.67
SNX29-207ENST00000568949 PNPLA6Q8IY17 1366 aa19.21■□□□□ 0.67
SNX29-207ENST00000568949 C8orf37Q96NL8 207 aa19.21■□□□□ 0.67
SNX29-207ENST00000568949 ADGRL3Q9HAR2 1447 aa19.21■□□□□ 0.67
SNX29-207ENST00000568949 METP08581 1390 aa19.2■□□□□ 0.66
SNX29-207ENST00000568949 SPHKAPQ2M3C7 1700 aa19.17■□□□□ 0.66
SNX29-207ENST00000568949 ZNF326Q5BKZ1 582 aaKnown RBP19.16■□□□□ 0.66
SNX29-207ENST00000568949 DDX17Q92841 729 aaKnown RBP19.16■□□□□ 0.66
SNX29-207ENST00000568949 NGLY1Q96IV0 654 aa19.16■□□□□ 0.66
SNX29-207ENST00000568949 LAMC1P11047 1609 aa19.14■□□□□ 0.66
SNX29-207ENST00000568949 NALCNQ8IZF0 1738 aa19.14■□□□□ 0.66
SNX29-207ENST00000568949 C1orf167Q5SNV9 1468 aa19.13■□□□□ 0.65
SNX29-207ENST00000568949 NEXMIFQ5QGS0 1516 aa19.12■□□□□ 0.65
SNX29-207ENST00000568949 ADAMTS2O95450 1211 aa19.12■□□□□ 0.65
SNX29-207ENST00000568949 ATAD2Q6PL18 1390 aa19.11■□□□□ 0.65
SNX29-207ENST00000568949 SOS2Q07890 1332 aaPredicted RBP19.11■□□□□ 0.65
SNX29-207ENST00000568949 PTCH1Q13635 1447 aa19.09■□□□□ 0.65
SNX29-207ENST00000568949 USP21Q9UK80 565 aa19.09■□□□□ 0.65
SNX29-207ENST00000568949 TRPC5Q9UL62 973 aaPredicted RBP19.09■□□□□ 0.65
SNX29-207ENST00000568949 FOXD1Q16676 465 aa19.08■□□□□ 0.64
SNX29-207ENST00000568949 FNBP4Q8N3X1 1017 aaPredicted RBP19.08■□□□□ 0.64
SNX29-207ENST00000568949 CLTCL1P53675 1640 aa19.07■□□□□ 0.64
SNX29-207ENST00000568949 ITGAEP38570 1179 aa19.06■□□□□ 0.64
SNX29-207ENST00000568949 ORAI2Q96SN7 254 aa19.06■□□□□ 0.64
SNX29-207ENST00000568949 PRAG1Q86YV5 1406 aa19.06■□□□□ 0.64
SNX29-207ENST00000568949 KIF1BO60333 1816 aa19.05■□□□□ 0.64
SNX29-207ENST00000568949 ATRNO75882 1429 aa19.05■□□□□ 0.64
SNX29-207ENST00000568949 COL22A1Q8NFW1 1626 aaPredicted RBP19.04■□□□□ 0.64
SNX29-207ENST00000568949 VGFO15240 615 aaPredicted RBP19.04■□□□□ 0.64
SNX29-207ENST00000568949 ROBO2Q9HCK4 1378 aa19.04■□□□□ 0.64
SNX29-207ENST00000568949 CCDC125Q86Z20 511 aa19.02■□□□□ 0.64
SNX29-207ENST00000568949 ZRANB1Q9UGI0 708 aa19.02■□□□□ 0.64
SNX29-207ENST00000568949 HFM1A2PYH4 1435 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms