RNA–Protein interactions for RNA: ENST00000568890.5

CNEP1R1-210, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 1,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-210ENST00000568890 RIMS2Q9UQ26 1411 aa24.37■■□□□ 1.49
CNEP1R1-210ENST00000568890 EID1Q9Y6B2 187 aa24.36■■□□□ 1.49
CNEP1R1-210ENST00000568890 NEURL4Q96JN8 1562 aa24.34■■□□□ 1.49
CNEP1R1-210ENST00000568890 SCAF11Q99590 1463 aaKnown RBP24.34■■□□□ 1.49
CNEP1R1-210ENST00000568890 MED14O60244 1454 aa24.32■■□□□ 1.48
CNEP1R1-210ENST00000568890 DMRT2Q9Y5R5 561 aa24.31■■□□□ 1.48
CNEP1R1-210ENST00000568890 NPHP4O75161 1426 aaPredicted RBP24.29■■□□□ 1.48
CNEP1R1-210ENST00000568890 HDGFP51858 240 aaKnown RBP24.29■■□□□ 1.48
CNEP1R1-210ENST00000568890 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.29■■□□□ 1.48
CNEP1R1-210ENST00000568890 NEUROD1Q13562 356 aa24.28■■□□□ 1.48
CNEP1R1-210ENST00000568890 SLC26A8Q96RN1 970 aa24.28■■□□□ 1.48
CNEP1R1-210ENST00000568890 KIF1BO60333 1816 aa24.28■■□□□ 1.48
CNEP1R1-210ENST00000568890 PPP1R15AO75807 674 aaPredicted RBP24.27■■□□□ 1.48
CNEP1R1-210ENST00000568890 NEXMIFQ5QGS0 1516 aa24.27■■□□□ 1.48
CNEP1R1-210ENST00000568890 RPGRIP1LQ68CZ1 1315 aa24.27■■□□□ 1.48
CNEP1R1-210ENST00000568890 ADGRF5Q8IZF2 1346 aa24.25■■□□□ 1.47
CNEP1R1-210ENST00000568890 PLEKHG1Q9ULL1 1385 aa24.24■■□□□ 1.47
CNEP1R1-210ENST00000568890 VGFO15240 615 aaPredicted RBP24.23■■□□□ 1.47
CNEP1R1-210ENST00000568890 BCANQ96GW7 911 aa24.23■■□□□ 1.47
CNEP1R1-210ENST00000568890 POLR1AO95602 1720 aaPredicted RBP24.23■■□□□ 1.47
CNEP1R1-210ENST00000568890 DCAF11Q8TEB1 546 aa24.22■■□□□ 1.47
CNEP1R1-210ENST00000568890 KDM2AQ9Y2K7 1162 aa24.21■■□□□ 1.47
CNEP1R1-210ENST00000568890 ZNF335Q9H4Z2 1342 aaPredicted RBP24.21■■□□□ 1.47
CNEP1R1-210ENST00000568890 ADAMTS13Q76LX8 1427 aa24.2■■□□□ 1.46
CNEP1R1-210ENST00000568890 L3MBTL2Q969R5 705 aa24.18■■□□□ 1.46
CNEP1R1-210ENST00000568890 IQGAP1P46940 1657 aa24.18■■□□□ 1.46
CNEP1R1-210ENST00000568890 TBX22Q9Y458 520 aa24.17■■□□□ 1.46
CNEP1R1-210ENST00000568890 CCER1Q8TC90 406 aaPredicted RBP24.16■■□□□ 1.46
CNEP1R1-210ENST00000568890 PPLO60437 1756 aa24.14■■□□□ 1.46
CNEP1R1-210ENST00000568890 NRXN3Q9Y4C0 1643 aa24.12■■□□□ 1.45
CNEP1R1-210ENST00000568890 METP08581 1390 aa24.12■■□□□ 1.45
CNEP1R1-210ENST00000568890 SETBP1Q9Y6X0 1596 aa24.1■■□□□ 1.45
CNEP1R1-210ENST00000568890 IFT172Q9UG01 1749 aa24.1■■□□□ 1.45
CNEP1R1-210ENST00000568890 NRXN1Q9ULB1 1477 aa24.1■■□□□ 1.45
CNEP1R1-210ENST00000568890 CFAP70Q5T0N1 1121 aa24.09■■□□□ 1.45
CNEP1R1-210ENST00000568890 PIK3C2GO75747 1445 aa24.09■■□□□ 1.45
CNEP1R1-210ENST00000568890 CLSPNQ9HAW4 1339 aa24.08■■□□□ 1.45
CNEP1R1-210ENST00000568890 C14orf93Q9H972 538 aaKnown RBP24.07■■□□□ 1.44
CNEP1R1-210ENST00000568890 LTBP4Q8N2S1 1624 aa24.07■■□□□ 1.44
CNEP1R1-210ENST00000568890 PTPRUQ92729 1446 aa24.07■■□□□ 1.44
CNEP1R1-210ENST00000568890 MYOM2P54296 1465 aa24.07■■□□□ 1.44
CNEP1R1-210ENST00000568890 KCNA6P17658 529 aa24.07■■□□□ 1.44
CNEP1R1-210ENST00000568890 TMEM132EQ6IEE7 984 aa24.07■■□□□ 1.44
CNEP1R1-210ENST00000568890 STAC3Q96MF2 364 aa24.05■■□□□ 1.44
CNEP1R1-210ENST00000568890 ALKQ9UM73 1620 aa24.04■■□□□ 1.44
CNEP1R1-210ENST00000568890 RBM33Q96EV2 1170 aaKnown RBP24.04■■□□□ 1.44
CNEP1R1-210ENST00000568890 AMOTL2Q9Y2J4 779 aa24.03■■□□□ 1.44
CNEP1R1-210ENST00000568890 STRCP1A6NGW2 1772 aa24.03■■□□□ 1.44
CNEP1R1-210ENST00000568890 NBPF8Q3BBV2 869 aa24.01■■□□□ 1.43
CNEP1R1-210ENST00000568890 TONSLQ96HA7 1378 aa23.99■■□□□ 1.43
CNEP1R1-210ENST00000568890 PIK3R4Q99570 1358 aa23.99■■□□□ 1.43
CNEP1R1-210ENST00000568890 NBPF1Q3BBV0 1214 aa23.99■■□□□ 1.43
CNEP1R1-210ENST00000568890 PRAG1Q86YV5 1406 aa23.98■■□□□ 1.43
CNEP1R1-210ENST00000568890 SETD1AO15047 1707 aaKnown RBP23.98■■□□□ 1.43
CNEP1R1-210ENST00000568890 DIP2AQ14689 1571 aa23.98■■□□□ 1.43
CNEP1R1-210ENST00000568890 CERKQ8TCT0 537 aa23.98■■□□□ 1.43
CNEP1R1-210ENST00000568890 ASXL1Q8IXJ9 1541 aa23.96■■□□□ 1.43
CNEP1R1-210ENST00000568890 STK26Q9P289 416 aa23.96■■□□□ 1.43
CNEP1R1-210ENST00000568890 PROSER2Q86WR7 435 aaPredicted RBP23.95■■□□□ 1.42
CNEP1R1-210ENST00000568890 CHD2O14647 1828 aaKnown RBP23.94■■□□□ 1.42
CNEP1R1-210ENST00000568890 LRRC7Q96NW7 1537 aa23.94■■□□□ 1.42
CNEP1R1-210ENST00000568890 TMEM94Q12767 1356 aa23.91■■□□□ 1.42
CNEP1R1-210ENST00000568890 ROBO2Q9HCK4 1378 aa23.91■■□□□ 1.42
CNEP1R1-210ENST00000568890 NWD1Q149M9 1564 aa23.91■■□□□ 1.42
CNEP1R1-210ENST00000568890 CPS1P31327 1500 aa23.91■■□□□ 1.42
CNEP1R1-210ENST00000568890 ADGRB1O14514 1584 aa23.9■■□□□ 1.42
CNEP1R1-210ENST00000568890 WAPLQ7Z5K2 1190 aa23.89■■□□□ 1.42
CNEP1R1-210ENST00000568890 LRPPRCP42704 1394 aaKnown RBP23.89■■□□□ 1.42
CNEP1R1-210ENST00000568890 YTHDC2Q9H6S0 1430 aaKnown RBP23.89■■□□□ 1.41
CNEP1R1-210ENST00000568890 TIMELESSQ9UNS1 1208 aa23.89■■□□□ 1.41
CNEP1R1-210ENST00000568890 ABCC11Q96J66 1382 aa23.88■■□□□ 1.41
CNEP1R1-210ENST00000568890 XRN1Q8IZH2 1706 aaKnown RBP23.86■■□□□ 1.41
CNEP1R1-210ENST00000568890 NKTRP30414 1462 aaKnown RBP23.86■■□□□ 1.41
CNEP1R1-210ENST00000568890 TRAK1Q9UPV9 953 aa23.86■■□□□ 1.41
CNEP1R1-210ENST00000568890 PLEKHH1Q9ULM0 1364 aa23.84■■□□□ 1.41
CNEP1R1-210ENST00000568890 TECPR2O15040 1411 aa23.83■■□□□ 1.41
CNEP1R1-210ENST00000568890 PTCH1Q13635 1447 aa23.8■■□□□ 1.4
CNEP1R1-210ENST00000568890 LAMC1P11047 1609 aa23.8■■□□□ 1.4
CNEP1R1-210ENST00000568890 XIRP1Q702N8 1843 aaKnown RBP23.8■■□□□ 1.4
CNEP1R1-210ENST00000568890 SIRT1Q96EB6 747 aa23.8■■□□□ 1.4
CNEP1R1-210ENST00000568890 PRAM1Q96QH2 718 aa23.8■■□□□ 1.4
CNEP1R1-210ENST00000568890 SAFB2Q14151 953 aaKnown RBP eCLIP23.79■■□□□ 1.4
CNEP1R1-210ENST00000568890 C19orf44Q9H6X5 657 aa23.78■■□□□ 1.4
CNEP1R1-210ENST00000568890 ROCK2O75116 1388 aaKnown RBP23.77■■□□□ 1.4
CNEP1R1-210ENST00000568890 TRPM1Q7Z4N2 1603 aa23.77■■□□□ 1.4
CNEP1R1-210ENST00000568890 C14orf37Q86TY3 774 aa23.76■■□□□ 1.39
CNEP1R1-210ENST00000568890 NCOA3Q9Y6Q9 1424 aa23.76■■□□□ 1.39
CNEP1R1-210ENST00000568890 KIAA1210Q9ULL0 1709 aa23.75■■□□□ 1.39
CNEP1R1-210ENST00000568890 GPRASP1Q5JY77 1395 aa23.75■■□□□ 1.39
CNEP1R1-210ENST00000568890 FAM135BQ49AJ0 1406 aa23.74■■□□□ 1.39
CNEP1R1-210ENST00000568890 IQSEC2Q5JU85 1478 aa23.74■■□□□ 1.39
CNEP1R1-210ENST00000568890 UBAP1LF5GYI3 381 aa23.74■■□□□ 1.39
CNEP1R1-210ENST00000568890 CARD11Q9BXL7 1154 aa23.72■■□□□ 1.39
CNEP1R1-210ENST00000568890 POGKQ9P215 609 aa23.72■■□□□ 1.39
CNEP1R1-210ENST00000568890 RALGAPBQ86X10 1494 aa23.72■■□□□ 1.39
CNEP1R1-210ENST00000568890 MSH6P52701 1360 aa23.71■■□□□ 1.39
CNEP1R1-210ENST00000568890 DLC1Q96QB1 1528 aa23.7■■□□□ 1.38
CNEP1R1-210ENST00000568890 HIRIP3Q9BW71 556 aaPredicted RBP23.7■■□□□ 1.38
CNEP1R1-210ENST00000568890 ADGRL3Q9HAR2 1447 aa23.69■■□□□ 1.38
CNEP1R1-210ENST00000568890 KNDC1Q76NI1 1749 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms