RNA–Protein interactions for RNA: ENST00000568549.5

SCAPER-221, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-221ENST00000568549 LMTK3Q96Q04 1460 aa11.12□□□□□ -0.63
SCAPER-221ENST00000568549 NEXMIFQ5QGS0 1516 aa11.11□□□□□ -0.63
SCAPER-221ENST00000568549 RGL3Q3MIN7 710 aa11.11□□□□□ -0.63
SCAPER-221ENST00000568549 TONSLQ96HA7 1378 aa11.11□□□□□ -0.63
SCAPER-221ENST00000568549 SLIT1O75093 1534 aa11.1□□□□□ -0.63
SCAPER-221ENST00000568549 THEMISQ8N1K5 641 aaPredicted RBP11.1□□□□□ -0.63
SCAPER-221ENST00000568549 ARHGAP23Q9P227 1491 aa11.09□□□□□ -0.63
SCAPER-221ENST00000568549 TMEM2Q9UHN6 1383 aa11.09□□□□□ -0.63
SCAPER-221ENST00000568549 ZFYVE9O95405 1425 aa11.09□□□□□ -0.63
SCAPER-221ENST00000568549 RIMS2Q9UQ26 1411 aa11.09□□□□□ -0.63
SCAPER-221ENST00000568549 RPGRIP1LQ68CZ1 1315 aa11.09□□□□□ -0.63
SCAPER-221ENST00000568549 MYOM2P54296 1465 aa11.07□□□□□ -0.64
SCAPER-221ENST00000568549 L3MBTL2Q969R5 705 aa11.07□□□□□ -0.64
SCAPER-221ENST00000568549 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.06□□□□□ -0.64
SCAPER-221ENST00000568549 DCAF11Q8TEB1 546 aa11.06□□□□□ -0.64
SCAPER-221ENST00000568549 TIMELESSQ9UNS1 1208 aa11.06□□□□□ -0.64
SCAPER-221ENST00000568549 SCAF11Q99590 1463 aaKnown RBP11.06□□□□□ -0.64
SCAPER-221ENST00000568549 IQGAP1P46940 1657 aa11.05□□□□□ -0.64
SCAPER-221ENST00000568549 HDGFP51858 240 aaKnown RBP11.05□□□□□ -0.64
SCAPER-221ENST00000568549 NUTM2DQ5VT03 806 aaPredicted RBP11.05□□□□□ -0.64
SCAPER-221ENST00000568549 EID1Q9Y6B2 187 aa11.05□□□□□ -0.64
SCAPER-221ENST00000568549 STRCQ7RTU9 1775 aa11.05□□□□□ -0.64
SCAPER-221ENST00000568549 VGFO15240 615 aaPredicted RBP11.04□□□□□ -0.64
SCAPER-221ENST00000568549 PPP1R15AO75807 674 aaPredicted RBP11.04□□□□□ -0.64
SCAPER-221ENST00000568549 HSPA2P54652 639 aa11.04□□□□□ -0.64
SCAPER-221ENST00000568549 TXNDC2Q86VQ3 553 aa11.04□□□□□ -0.64
SCAPER-221ENST00000568549 STAC3Q96MF2 364 aa11.04□□□□□ -0.64
SCAPER-221ENST00000568549 KDM2AQ9Y2K7 1162 aa11.04□□□□□ -0.64
SCAPER-221ENST00000568549 LAMC1P11047 1609 aa11.04□□□□□ -0.64
SCAPER-221ENST00000568549 NRXN1Q9ULB1 1477 aa11.04□□□□□ -0.64
SCAPER-221ENST00000568549 NRXN3Q9Y4C0 1643 aa11.03□□□□□ -0.64
SCAPER-221ENST00000568549 LTKP29376 864 aa11.03□□□□□ -0.64
SCAPER-221ENST00000568549 ANKLE2Q86XL3 938 aa11.03□□□□□ -0.64
SCAPER-221ENST00000568549 KIAA1210Q9ULL0 1709 aa11.03□□□□□ -0.64
SCAPER-221ENST00000568549 ADGRF5Q8IZF2 1346 aa11.03□□□□□ -0.64
SCAPER-221ENST00000568549 SETBP1Q9Y6X0 1596 aa11.03□□□□□ -0.64
SCAPER-221ENST00000568549 TRPM1Q7Z4N2 1603 aa11.02□□□□□ -0.64
SCAPER-221ENST00000568549 PRAG1Q86YV5 1406 aa11.02□□□□□ -0.64
SCAPER-221ENST00000568549 PLEKHG1Q9ULL1 1385 aa11.02□□□□□ -0.65
SCAPER-221ENST00000568549 PIK3C2GO75747 1445 aa11.01□□□□□ -0.65
SCAPER-221ENST00000568549 SETD1AO15047 1707 aaKnown RBP11.01□□□□□ -0.65
SCAPER-221ENST00000568549 MED14O60244 1454 aa11.01□□□□□ -0.65
SCAPER-221ENST00000568549 NCKAP5LQ9HCH0 1330 aa11.01□□□□□ -0.65
SCAPER-221ENST00000568549 NPHP4O75161 1426 aaPredicted RBP11.01□□□□□ -0.65
SCAPER-221ENST00000568549 DIP2AQ14689 1571 aa11□□□□□ -0.65
SCAPER-221ENST00000568549 ALKQ9UM73 1620 aa11□□□□□ -0.65
SCAPER-221ENST00000568549 ZEB1P37275 1124 aaPredicted RBP11□□□□□ -0.65
SCAPER-221ENST00000568549 BCANQ96GW7 911 aa10.99□□□□□ -0.65
SCAPER-221ENST00000568549 RALGAPBQ86X10 1494 aa10.98□□□□□ -0.65
SCAPER-221ENST00000568549 NBPF8Q3BBV2 869 aa10.97□□□□□ -0.65
SCAPER-221ENST00000568549 ADAMTS13Q76LX8 1427 aa10.97□□□□□ -0.65
SCAPER-221ENST00000568549 CFAP70Q5T0N1 1121 aa10.96□□□□□ -0.65
SCAPER-221ENST00000568549 CHD2O14647 1828 aaKnown RBP10.95□□□□□ -0.66
SCAPER-221ENST00000568549 ASXL1Q8IXJ9 1541 aa10.95□□□□□ -0.66
SCAPER-221ENST00000568549 C14orf93Q9H972 538 aaKnown RBP10.95□□□□□ -0.66
SCAPER-221ENST00000568549 ADGRB1O14514 1584 aa10.94□□□□□ -0.66
SCAPER-221ENST00000568549 ROCK2O75116 1388 aaKnown RBP10.94□□□□□ -0.66
SCAPER-221ENST00000568549 SLC26A8Q96RN1 970 aa10.94□□□□□ -0.66
SCAPER-221ENST00000568549 KNDC1Q76NI1 1749 aa10.94□□□□□ -0.66
SCAPER-221ENST00000568549 TBX22Q9Y458 520 aa10.93□□□□□ -0.66
SCAPER-221ENST00000568549 XRN1Q8IZH2 1706 aaKnown RBP10.92□□□□□ -0.66
SCAPER-221ENST00000568549 METP08581 1390 aa10.92□□□□□ -0.66
SCAPER-221ENST00000568549 NBPF1Q3BBV0 1214 aa10.92□□□□□ -0.66
SCAPER-221ENST00000568549 DMRT2Q9Y5R5 561 aa10.92□□□□□ -0.66
SCAPER-221ENST00000568549 ARHGEF28Q8N1W1 1705 aaKnown RBP10.92□□□□□ -0.66
SCAPER-221ENST00000568549 GPRASP1Q5JY77 1395 aa10.91□□□□□ -0.66
SCAPER-221ENST00000568549 PIK3R4Q99570 1358 aa10.91□□□□□ -0.66
SCAPER-221ENST00000568549 NWD1Q149M9 1564 aa10.91□□□□□ -0.66
SCAPER-221ENST00000568549 STRCP1A6NGW2 1772 aa10.91□□□□□ -0.66
SCAPER-221ENST00000568549 TMEM132EQ6IEE7 984 aa10.91□□□□□ -0.66
SCAPER-221ENST00000568549 YTHDC2Q9H6S0 1430 aaKnown RBP10.91□□□□□ -0.66
SCAPER-221ENST00000568549 CARD11Q9BXL7 1154 aa10.9□□□□□ -0.66
SCAPER-221ENST00000568549 PTPRUQ92729 1446 aa10.9□□□□□ -0.66
SCAPER-221ENST00000568549 LRPPRCP42704 1394 aaKnown RBP10.9□□□□□ -0.67
SCAPER-221ENST00000568549 CPS1P31327 1500 aa10.89□□□□□ -0.67
SCAPER-221ENST00000568549 STK26Q9P289 416 aa10.88□□□□□ -0.67
SCAPER-221ENST00000568549 QRICH2Q9H0J4 1663 aa10.88□□□□□ -0.67
SCAPER-221ENST00000568549 DLC1Q96QB1 1528 aa10.88□□□□□ -0.67
SCAPER-221ENST00000568549 TECPR2O15040 1411 aa10.87□□□□□ -0.67
SCAPER-221ENST00000568549 TRAK1Q9UPV9 953 aa10.87□□□□□ -0.67
SCAPER-221ENST00000568549 AMOTL2Q9Y2J4 779 aa10.87□□□□□ -0.67
SCAPER-221ENST00000568549 ABCC11Q96J66 1382 aa10.87□□□□□ -0.67
SCAPER-221ENST00000568549 NKTRP30414 1462 aaKnown RBP10.87□□□□□ -0.67
SCAPER-221ENST00000568549 PTCH1Q13635 1447 aa10.86□□□□□ -0.67
SCAPER-221ENST00000568549 KCNA6P17658 529 aa10.86□□□□□ -0.67
SCAPER-221ENST00000568549 EIF3AQ14152 1382 aaKnown RBP10.86□□□□□ -0.67
SCAPER-221ENST00000568549 USP47Q96K76 1375 aa10.86□□□□□ -0.67
SCAPER-221ENST00000568549 ZNF335Q9H4Z2 1342 aaPredicted RBP10.84□□□□□ -0.67
SCAPER-221ENST00000568549 FAM135BQ49AJ0 1406 aa10.84□□□□□ -0.67
SCAPER-221ENST00000568549 XIRP1Q702N8 1843 aaKnown RBP10.84□□□□□ -0.67
SCAPER-221ENST00000568549 ROBO2Q9HCK4 1378 aa10.84□□□□□ -0.67
SCAPER-221ENST00000568549 EIF4G2P78344 907 aaKnown RBP eCLIP10.83□□□□□ -0.68
SCAPER-221ENST00000568549 NALCNQ8IZF0 1738 aa10.83□□□□□ -0.68
SCAPER-221ENST00000568549 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.83□□□□□ -0.68
SCAPER-221ENST00000568549 SIRT1Q96EB6 747 aa10.82□□□□□ -0.68
SCAPER-221ENST00000568549 PRAM1Q96QH2 718 aa10.82□□□□□ -0.68
SCAPER-221ENST00000568549 POGKQ9P215 609 aa10.82□□□□□ -0.68
SCAPER-221ENST00000568549 CENPJQ9HC77 1338 aaPredicted RBP10.82□□□□□ -0.68
SCAPER-221ENST00000568549 LTBP4Q8N2S1 1624 aa10.81□□□□□ -0.68
SCAPER-221ENST00000568549 PLEKHH1Q9ULM0 1364 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms