RNA–Protein interactions for RNA: ENST00000568535.1

BBS4-214, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-214ENST00000568535 UGGT1Q9NYU2 1555 aa11.49□□□□□ -0.57
BBS4-214ENST00000568535 HDGFP51858 240 aaKnown RBP11.48□□□□□ -0.57
BBS4-214ENST00000568535 ADGRB3O60242 1522 aa11.48□□□□□ -0.57
BBS4-214ENST00000568535 CLTCQ00610 1675 aaKnown RBP11.48□□□□□ -0.57
BBS4-214ENST00000568535 SYNMO15061 1565 aa11.47□□□□□ -0.57
BBS4-214ENST00000568535 SLC24A1O60721 1099 aa11.47□□□□□ -0.57
BBS4-214ENST00000568535 DDX10Q13206 875 aaKnown RBP11.47□□□□□ -0.57
BBS4-214ENST00000568535 PREX1Q8TCU6 1659 aa11.46□□□□□ -0.57
BBS4-214ENST00000568535 PIK3C2BO00750 1634 aa11.46□□□□□ -0.57
BBS4-214ENST00000568535 NBPF1Q3BBV0 1214 aa11.46□□□□□ -0.57
BBS4-214ENST00000568535 SIGLEC1Q9BZZ2 1709 aa11.46□□□□□ -0.58
BBS4-214ENST00000568535 TRPM1Q7Z4N2 1603 aa11.45□□□□□ -0.58
BBS4-214ENST00000568535 PTPRMP28827 1452 aa11.44□□□□□ -0.58
BBS4-214ENST00000568535 ADGRF5Q8IZF2 1346 aa11.44□□□□□ -0.58
BBS4-214ENST00000568535 ST20-MTHFSA0A0A6YYL1 179 aa11.44□□□□□ -0.58
BBS4-214ENST00000568535 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.44□□□□□ -0.58
BBS4-214ENST00000568535 ZFYVE9O95405 1425 aa11.43□□□□□ -0.58
BBS4-214ENST00000568535 EIF3AQ14152 1382 aaKnown RBP11.43□□□□□ -0.58
BBS4-214ENST00000568535 TNRQ92752 1358 aa11.43□□□□□ -0.58
BBS4-214ENST00000568535 CFAP65Q6ZU64 1925 aaKnown RBP11.43□□□□□ -0.58
BBS4-214ENST00000568535 LAMC1P11047 1609 aa11.43□□□□□ -0.58
BBS4-214ENST00000568535 MADDQ8WXG6 1647 aa11.43□□□□□ -0.58
BBS4-214ENST00000568535 WASHC2AQ641Q2 1341 aa11.43□□□□□ -0.58
BBS4-214ENST00000568535 HSPA2P54652 639 aa11.43□□□□□ -0.58
BBS4-214ENST00000568535 C14orf93Q9H972 538 aaKnown RBP11.43□□□□□ -0.58
BBS4-214ENST00000568535 NRXN1Q9ULB1 1477 aa11.43□□□□□ -0.58
BBS4-214ENST00000568535 CCDC7Q96M83 1385 aa11.42□□□□□ -0.58
BBS4-214ENST00000568535 CFAP70Q5T0N1 1121 aa11.42□□□□□ -0.58
BBS4-214ENST00000568535 MROH2AA6NES4 1674 aa11.42□□□□□ -0.58
BBS4-214ENST00000568535 SCAF11Q99590 1463 aaKnown RBP11.41□□□□□ -0.58
BBS4-214ENST00000568535 KIAA1210Q9ULL0 1709 aa11.4□□□□□ -0.58
BBS4-214ENST00000568535 ANP32CO43423 234 aa11.4□□□□□ -0.58
BBS4-214ENST00000568535 TMF1P82094 1093 aa11.4□□□□□ -0.58
BBS4-214ENST00000568535 CDCA8Q53HL2 280 aa11.4□□□□□ -0.58
BBS4-214ENST00000568535 MIER1Q8N108 512 aa11.4□□□□□ -0.58
BBS4-214ENST00000568535 PIK3C2GO75747 1445 aa11.4□□□□□ -0.58
BBS4-214ENST00000568535 KIF7Q2M1P5 1343 aa11.39□□□□□ -0.59
BBS4-214ENST00000568535 NLRP1Q9C000 1473 aa11.39□□□□□ -0.59
BBS4-214ENST00000568535 TMEM131LA2VDJ0 1609 aa11.39□□□□□ -0.59
BBS4-214ENST00000568535 IFT172Q9UG01 1749 aa11.39□□□□□ -0.59
BBS4-214ENST00000568535 NEXMIFQ5QGS0 1516 aa11.39□□□□□ -0.59
BBS4-214ENST00000568535 A2ML1A8K2U0 1454 aa11.38□□□□□ -0.59
BBS4-214ENST00000568535 SCAF1Q9H7N4 1312 aaKnown RBP11.38□□□□□ -0.59
BBS4-214ENST00000568535 C11orf95C9JLR9 678 aaPredicted RBP11.38□□□□□ -0.59
BBS4-214ENST00000568535 PPLO60437 1756 aa11.38□□□□□ -0.59
BBS4-214ENST00000568535 CEBPAP49715 358 aaPredicted RBP11.37□□□□□ -0.59
BBS4-214ENST00000568535 MAPK8IP2Q13387 824 aaPredicted RBP11.37□□□□□ -0.59
BBS4-214ENST00000568535 NUTM2DQ5VT03 806 aaPredicted RBP11.37□□□□□ -0.59
BBS4-214ENST00000568535 POLR3GLQ9BT43 218 aa11.37□□□□□ -0.59
BBS4-214ENST00000568535 SETBP1Q9Y6X0 1596 aa11.37□□□□□ -0.59
BBS4-214ENST00000568535 RIMS2Q9UQ26 1411 aa11.36□□□□□ -0.59
BBS4-214ENST00000568535 THEMISQ8N1K5 641 aaPredicted RBP11.36□□□□□ -0.59
BBS4-214ENST00000568535 TESK2Q96S53 571 aa11.35□□□□□ -0.59
BBS4-214ENST00000568535 EID1Q9Y6B2 187 aa11.35□□□□□ -0.59
BBS4-214ENST00000568535 FER1L4A9Z1Z3 1794 aa11.35□□□□□ -0.59
BBS4-214ENST00000568535 TMEM2Q9UHN6 1383 aa11.34□□□□□ -0.59
BBS4-214ENST00000568535 KDM5AP29375 1690 aaKnown RBP11.33□□□□□ -0.6
BBS4-214ENST00000568535 TMEM132EQ6IEE7 984 aa11.33□□□□□ -0.6
BBS4-214ENST00000568535 BCANQ96GW7 911 aa11.33□□□□□ -0.6
BBS4-214ENST00000568535 TRAK1Q9UPV9 953 aa11.33□□□□□ -0.6
BBS4-214ENST00000568535 CENPJQ9HC77 1338 aaPredicted RBP11.33□□□□□ -0.6
BBS4-214ENST00000568535 C3P01024 1663 aa11.32□□□□□ -0.6
BBS4-214ENST00000568535 IQGAP1P46940 1657 aa11.32□□□□□ -0.6
BBS4-214ENST00000568535 POLR1AO95602 1720 aaPredicted RBP11.32□□□□□ -0.6
BBS4-214ENST00000568535 ADAMTSL3P82987 1691 aa11.31□□□□□ -0.6
BBS4-214ENST00000568535 CCER2I3L3R5 266 aa11.31□□□□□ -0.6
BBS4-214ENST00000568535 SBNO2Q9Y2G9 1366 aa11.3□□□□□ -0.6
BBS4-214ENST00000568535 TXNDC2Q86VQ3 553 aa11.3□□□□□ -0.6
BBS4-214ENST00000568535 ADGRB1O14514 1584 aa11.29□□□□□ -0.6
BBS4-214ENST00000568535 PUS7Q96PZ0 661 aaKnown RBP11.28□□□□□ -0.6
BBS4-214ENST00000568535 POGKQ9P215 609 aa11.28□□□□□ -0.6
BBS4-214ENST00000568535 STK26Q9P289 416 aa11.28□□□□□ -0.6
BBS4-214ENST00000568535 MYO5BQ9ULV0 1848 aa11.28□□□□□ -0.6
BBS4-214ENST00000568535 PLEKHG1Q9ULL1 1385 aa11.28□□□□□ -0.6
BBS4-214ENST00000568535 ALKQ9UM73 1620 aa11.27□□□□□ -0.6
BBS4-214ENST00000568535 YTHDC2Q9H6S0 1430 aaKnown RBP11.27□□□□□ -0.6
BBS4-214ENST00000568535 RIMS1Q86UR5 1692 aaKnown RBP11.27□□□□□ -0.6
BBS4-214ENST00000568535 UBR1Q8IWV7 1749 aa11.27□□□□□ -0.61
BBS4-214ENST00000568535 EVC2Q86UK5 1308 aa11.27□□□□□ -0.61
BBS4-214ENST00000568535 SLIT1O75093 1534 aa11.26□□□□□ -0.61
BBS4-214ENST00000568535 KCNA4P22459 653 aa11.26□□□□□ -0.61
BBS4-214ENST00000568535 SIRT1Q96EB6 747 aa11.26□□□□□ -0.61
BBS4-214ENST00000568535 LRPPRCP42704 1394 aaKnown RBP11.26□□□□□ -0.61
BBS4-214ENST00000568535 LTKP29376 864 aa11.25□□□□□ -0.61
BBS4-214ENST00000568535 ANKLE2Q86XL3 938 aa11.25□□□□□ -0.61
BBS4-214ENST00000568535 PRKRIP1Q9H875 184 aaPredicted RBP11.25□□□□□ -0.61
BBS4-214ENST00000568535 KTN1Q86UP2 1357 aaKnown RBP11.25□□□□□ -0.61
BBS4-214ENST00000568535 ABCC11Q96J66 1382 aa11.25□□□□□ -0.61
BBS4-214ENST00000568535 ARHGAP23Q9P227 1491 aa11.25□□□□□ -0.61
BBS4-214ENST00000568535 MYO3AQ8NEV4 1616 aa11.24□□□□□ -0.61
BBS4-214ENST00000568535 PRAM1Q96QH2 718 aa11.24□□□□□ -0.61
BBS4-214ENST00000568535 PANK3Q9H999 370 aa11.24□□□□□ -0.61
BBS4-214ENST00000568535 TBX22Q9Y458 520 aa11.24□□□□□ -0.61
BBS4-214ENST00000568535 RALBP1Q15311 655 aa11.23□□□□□ -0.61
BBS4-214ENST00000568535 KNSTRNQ9Y448 316 aa11.23□□□□□ -0.61
BBS4-214ENST00000568535 CEP170BQ9Y4F5 1589 aaPredicted RBP11.23□□□□□ -0.61
BBS4-214ENST00000568535 CENPBP07199 599 aaPredicted RBP11.22□□□□□ -0.61
BBS4-214ENST00000568535 DLC1Q96QB1 1528 aa11.22□□□□□ -0.61
BBS4-214ENST00000568535 METP08581 1390 aa11.21□□□□□ -0.61
BBS4-214ENST00000568535 ASXL1Q8IXJ9 1541 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms