RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-223ENST00000568499 NEURL4Q96JN8 1562 aa21.54■■□□□ 1.04
KLHDC4-223ENST00000568499 SLIT1O75093 1534 aa21.54■■□□□ 1.04
KLHDC4-223ENST00000568499 SPATA31E1Q6ZUB1 1445 aa21.54■■□□□ 1.04
KLHDC4-223ENST00000568499 VGFO15240 615 aaPredicted RBP21.53■■□□□ 1.04
KLHDC4-223ENST00000568499 DMRT2Q9Y5R5 561 aa21.53■■□□□ 1.04
KLHDC4-223ENST00000568499 ARHGAP23Q9P227 1491 aa21.52■■□□□ 1.04
KLHDC4-223ENST00000568499 STAC3Q96MF2 364 aa21.52■■□□□ 1.04
KLHDC4-223ENST00000568499 BCANQ96GW7 911 aa21.51■■□□□ 1.03
KLHDC4-223ENST00000568499 NCKAP5LQ9HCH0 1330 aa21.51■■□□□ 1.03
KLHDC4-223ENST00000568499 SCAF11Q99590 1463 aaKnown RBP21.51■■□□□ 1.03
KLHDC4-223ENST00000568499 LTKP29376 864 aa21.49■■□□□ 1.03
KLHDC4-223ENST00000568499 ZFYVE9O95405 1425 aa21.48■■□□□ 1.03
KLHDC4-223ENST00000568499 NUTM2DQ5VT03 806 aaPredicted RBP21.48■■□□□ 1.03
KLHDC4-223ENST00000568499 TONSLQ96HA7 1378 aa21.48■■□□□ 1.03
KLHDC4-223ENST00000568499 DCAF11Q8TEB1 546 aa21.47■■□□□ 1.03
KLHDC4-223ENST00000568499 MYO5BQ9ULV0 1848 aa21.46■■□□□ 1.03
KLHDC4-223ENST00000568499 TIMELESSQ9UNS1 1208 aa21.44■■□□□ 1.02
KLHDC4-223ENST00000568499 KDM2AQ9Y2K7 1162 aa21.44■■□□□ 1.02
KLHDC4-223ENST00000568499 PLEKHG1Q9ULL1 1385 aa21.44■■□□□ 1.02
KLHDC4-223ENST00000568499 NPHP4O75161 1426 aaPredicted RBP21.44■■□□□ 1.02
KLHDC4-223ENST00000568499 NEXMIFQ5QGS0 1516 aa21.44■■□□□ 1.02
KLHDC4-223ENST00000568499 MED14O60244 1454 aa21.42■■□□□ 1.02
KLHDC4-223ENST00000568499 L3MBTL2Q969R5 705 aa21.42■■□□□ 1.02
KLHDC4-223ENST00000568499 POLR1AO95602 1720 aaPredicted RBP21.41■■□□□ 1.02
KLHDC4-223ENST00000568499 MYOM2P54296 1465 aa21.39■■□□□ 1.01
KLHDC4-223ENST00000568499 ADGRF5Q8IZF2 1346 aa21.37■■□□□ 1.01
KLHDC4-223ENST00000568499 SENP3Q9H4L4 574 aaPredicted RBP21.37■■□□□ 1.01
KLHDC4-223ENST00000568499 PPLO60437 1756 aa21.37■■□□□ 1.01
KLHDC4-223ENST00000568499 STRCQ7RTU9 1775 aa21.36■■□□□ 1.01
KLHDC4-223ENST00000568499 TBX22Q9Y458 520 aa21.36■■□□□ 1.01
KLHDC4-223ENST00000568499 SLC26A8Q96RN1 970 aa21.35■■□□□ 1.01
KLHDC4-223ENST00000568499 IQGAP1P46940 1657 aa21.34■■□□□ 1.01
KLHDC4-223ENST00000568499 IFT172Q9UG01 1749 aa21.33■■□□□ 1.01
KLHDC4-223ENST00000568499 SETBP1Q9Y6X0 1596 aa21.31■■□□□ 1
KLHDC4-223ENST00000568499 PIK3C2GO75747 1445 aa21.31■■□□□ 1
KLHDC4-223ENST00000568499 NRXN1Q9ULB1 1477 aa21.31■■□□□ 1
KLHDC4-223ENST00000568499 C14orf93Q9H972 538 aaKnown RBP21.3■■□□□ 1
KLHDC4-223ENST00000568499 DIP2AQ14689 1571 aa21.3■■□□□ 1
KLHDC4-223ENST00000568499 ADAMTS13Q76LX8 1427 aa21.29■■□□□ 1
KLHDC4-223ENST00000568499 PIK3R4Q99570 1358 aa21.28■■□□□ 1
KLHDC4-223ENST00000568499 PRAG1Q86YV5 1406 aa21.28■■□□□ 1
KLHDC4-223ENST00000568499 CFAP70Q5T0N1 1121 aa21.27■■□□□ 1
KLHDC4-223ENST00000568499 ALKQ9UM73 1620 aa21.26■□□□□ 0.99
KLHDC4-223ENST00000568499 KCNA6P17658 529 aa21.24■□□□□ 0.99
KLHDC4-223ENST00000568499 LAMC1P11047 1609 aa21.22■□□□□ 0.99
KLHDC4-223ENST00000568499 NRXN3Q9Y4C0 1643 aa21.22■□□□□ 0.99
KLHDC4-223ENST00000568499 AMOTL2Q9Y2J4 779 aa21.21■□□□□ 0.99
KLHDC4-223ENST00000568499 METP08581 1390 aa21.21■□□□□ 0.99
KLHDC4-223ENST00000568499 TMEM132EQ6IEE7 984 aa21.2■□□□□ 0.98
KLHDC4-223ENST00000568499 ZNF335Q9H4Z2 1342 aaPredicted RBP21.2■□□□□ 0.98
KLHDC4-223ENST00000568499 NBPF8Q3BBV2 869 aa21.19■□□□□ 0.98
KLHDC4-223ENST00000568499 ROCK2O75116 1388 aaKnown RBP21.18■□□□□ 0.98
KLHDC4-223ENST00000568499 ZEB1P37275 1124 aaPredicted RBP21.17■□□□□ 0.98
KLHDC4-223ENST00000568499 STK26Q9P289 416 aa21.17■□□□□ 0.98
KLHDC4-223ENST00000568499 KIAA1210Q9ULL0 1709 aa21.16■□□□□ 0.98
KLHDC4-223ENST00000568499 LRPPRCP42704 1394 aaKnown RBP21.16■□□□□ 0.98
KLHDC4-223ENST00000568499 YTHDC2Q9H6S0 1430 aaKnown RBP21.14■□□□□ 0.98
KLHDC4-223ENST00000568499 NBPF1Q3BBV0 1214 aa21.14■□□□□ 0.97
KLHDC4-223ENST00000568499 PROSER2Q86WR7 435 aaPredicted RBP21.14■□□□□ 0.97
KLHDC4-223ENST00000568499 CPS1P31327 1500 aa21.14■□□□□ 0.97
KLHDC4-223ENST00000568499 ABCC11Q96J66 1382 aa21.13■□□□□ 0.97
KLHDC4-223ENST00000568499 CARD11Q9BXL7 1154 aa21.13■□□□□ 0.97
KLHDC4-223ENST00000568499 NKTRP30414 1462 aaKnown RBP21.13■□□□□ 0.97
KLHDC4-223ENST00000568499 PTPRUQ92729 1446 aa21.12■□□□□ 0.97
KLHDC4-223ENST00000568499 SIRT1Q96EB6 747 aa21.12■□□□□ 0.97
KLHDC4-223ENST00000568499 RALGAPBQ86X10 1494 aa21.12■□□□□ 0.97
KLHDC4-223ENST00000568499 SETD1AO15047 1707 aaKnown RBP21.12■□□□□ 0.97
KLHDC4-223ENST00000568499 TRAK1Q9UPV9 953 aa21.11■□□□□ 0.97
KLHDC4-223ENST00000568499 CHD2O14647 1828 aaKnown RBP21.11■□□□□ 0.97
KLHDC4-223ENST00000568499 NWD1Q149M9 1564 aa21.1■□□□□ 0.97
KLHDC4-223ENST00000568499 TRPM1Q7Z4N2 1603 aa21.1■□□□□ 0.97
KLHDC4-223ENST00000568499 ADGRB1O14514 1584 aa21.1■□□□□ 0.97
KLHDC4-223ENST00000568499 C14orf37Q86TY3 774 aa21.09■□□□□ 0.97
KLHDC4-223ENST00000568499 POGKQ9P215 609 aa21.09■□□□□ 0.97
KLHDC4-223ENST00000568499 ASXL1Q8IXJ9 1541 aa21.09■□□□□ 0.97
KLHDC4-223ENST00000568499 PTCH1Q13635 1447 aa21.08■□□□□ 0.97
KLHDC4-223ENST00000568499 GPRASP1Q5JY77 1395 aa21.08■□□□□ 0.96
KLHDC4-223ENST00000568499 TECPR2O15040 1411 aa21.07■□□□□ 0.96
KLHDC4-223ENST00000568499 EIF3AQ14152 1382 aaKnown RBP21.07■□□□□ 0.96
KLHDC4-223ENST00000568499 XRN1Q8IZH2 1706 aaKnown RBP21.06■□□□□ 0.96
KLHDC4-223ENST00000568499 FAM135BQ49AJ0 1406 aa21.05■□□□□ 0.96
KLHDC4-223ENST00000568499 NCOA3Q9Y6Q9 1424 aa21.05■□□□□ 0.96
KLHDC4-223ENST00000568499 ROBO2Q9HCK4 1378 aa21.05■□□□□ 0.96
KLHDC4-223ENST00000568499 LTBP4Q8N2S1 1624 aa21.04■□□□□ 0.96
KLHDC4-223ENST00000568499 PRAM1Q96QH2 718 aa21.04■□□□□ 0.96
KLHDC4-223ENST00000568499 TMEM94Q12767 1356 aa21.04■□□□□ 0.96
KLHDC4-223ENST00000568499 DLC1Q96QB1 1528 aa21.04■□□□□ 0.96
KLHDC4-223ENST00000568499 LRRC7Q96NW7 1537 aa21.03■□□□□ 0.96
KLHDC4-223ENST00000568499 KNDC1Q76NI1 1749 aa21.02■□□□□ 0.96
KLHDC4-223ENST00000568499 WAPLQ7Z5K2 1190 aa21.02■□□□□ 0.96
KLHDC4-223ENST00000568499 STRCP1A6NGW2 1772 aa21.01■□□□□ 0.95
KLHDC4-223ENST00000568499 CERKQ8TCT0 537 aa21.01■□□□□ 0.95
KLHDC4-223ENST00000568499 RBM33Q96EV2 1170 aaKnown RBP21■□□□□ 0.95
KLHDC4-223ENST00000568499 C19orf44Q9H6X5 657 aa21■□□□□ 0.95
KLHDC4-223ENST00000568499 CENPJQ9HC77 1338 aaPredicted RBP21■□□□□ 0.95
KLHDC4-223ENST00000568499 MSH6P52701 1360 aa20.99■□□□□ 0.95
KLHDC4-223ENST00000568499 SAFB2Q14151 953 aaKnown RBP eCLIP20.99■□□□□ 0.95
KLHDC4-223ENST00000568499 SLC24A1O60721 1099 aa20.98■□□□□ 0.95
KLHDC4-223ENST00000568499 IQSEC2Q5JU85 1478 aa20.97■□□□□ 0.95
KLHDC4-223ENST00000568499 ATF3P18847 181 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms