RNA–Protein interactions for RNA: ENST00000568413.1

RPAP1-211, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 586 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-211ENST00000568413 CHGAP10645 457 aaKnown RBP13.02□□□□□ -0.33
RPAP1-211ENST00000568413 LTKP29376 864 aa13.01□□□□□ -0.33
RPAP1-211ENST00000568413 SCAF11Q99590 1463 aaKnown RBP13.01□□□□□ -0.33
RPAP1-211ENST00000568413 TRPM2O94759 1503 aa13.01□□□□□ -0.33
RPAP1-211ENST00000568413 LRRC7Q96NW7 1537 aa13□□□□□ -0.33
RPAP1-211ENST00000568413 ARHGAP23Q9P227 1491 aa13□□□□□ -0.33
RPAP1-211ENST00000568413 ANKRD30BQ9BXX2 1392 aa13□□□□□ -0.33
RPAP1-211ENST00000568413 HDGFP51858 240 aaKnown RBP13□□□□□ -0.33
RPAP1-211ENST00000568413 XIRP1Q702N8 1843 aaKnown RBP12.99□□□□□ -0.33
RPAP1-211ENST00000568413 KDM5AP29375 1690 aaKnown RBP12.99□□□□□ -0.33
RPAP1-211ENST00000568413 SLIT1O75093 1534 aa12.99□□□□□ -0.33
RPAP1-211ENST00000568413 CCDC144AA2RUR9 1427 aa12.99□□□□□ -0.33
RPAP1-211ENST00000568413 EID1Q9Y6B2 187 aa12.99□□□□□ -0.33
RPAP1-211ENST00000568413 MED1Q15648 1581 aaPredicted RBP12.98□□□□□ -0.33
RPAP1-211ENST00000568413 TOM1O60784 492 aa12.98□□□□□ -0.33
RPAP1-211ENST00000568413 TXNDC2Q86VQ3 553 aa12.98□□□□□ -0.33
RPAP1-211ENST00000568413 MYO5BQ9ULV0 1848 aa12.97□□□□□ -0.33
RPAP1-211ENST00000568413 DHX57Q6P158 1386 aaKnown RBP12.97□□□□□ -0.33
RPAP1-211ENST00000568413 SOCS7O14512 581 aa12.97□□□□□ -0.33
RPAP1-211ENST00000568413 ZNF326Q5BKZ1 582 aaKnown RBP12.97□□□□□ -0.33
RPAP1-211ENST00000568413 CLTCL1P53675 1640 aa12.97□□□□□ -0.33
RPAP1-211ENST00000568413 ADGRB3O60242 1522 aa12.97□□□□□ -0.33
RPAP1-211ENST00000568413 TMEM2Q9UHN6 1383 aa12.96□□□□□ -0.33
RPAP1-211ENST00000568413 TMEM131LA2VDJ0 1609 aa12.96□□□□□ -0.33
RPAP1-211ENST00000568413 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.96□□□□□ -0.33
RPAP1-211ENST00000568413 KIF1BO60333 1816 aa12.95□□□□□ -0.34
RPAP1-211ENST00000568413 RPGRIP1LQ68CZ1 1315 aa12.94□□□□□ -0.34
RPAP1-211ENST00000568413 RGL3Q3MIN7 710 aa12.94□□□□□ -0.34
RPAP1-211ENST00000568413 RIMS2Q9UQ26 1411 aa12.93□□□□□ -0.34
RPAP1-211ENST00000568413 VGFO15240 615 aaPredicted RBP12.92□□□□□ -0.34
RPAP1-211ENST00000568413 PPP1R15AO75807 674 aaPredicted RBP12.92□□□□□ -0.34
RPAP1-211ENST00000568413 SPATA31E1Q6ZUB1 1445 aa12.91□□□□□ -0.34
RPAP1-211ENST00000568413 RBM33Q96EV2 1170 aaKnown RBP12.91□□□□□ -0.34
RPAP1-211ENST00000568413 SLC26A8Q96RN1 970 aa12.91□□□□□ -0.34
RPAP1-211ENST00000568413 ZFYVE9O95405 1425 aa12.9□□□□□ -0.34
RPAP1-211ENST00000568413 NUTM2DQ5VT03 806 aaPredicted RBP12.89□□□□□ -0.35
RPAP1-211ENST00000568413 BCANQ96GW7 911 aa12.89□□□□□ -0.35
RPAP1-211ENST00000568413 STAC3Q96MF2 364 aa12.89□□□□□ -0.35
RPAP1-211ENST00000568413 SIN3AQ96ST3 1273 aa12.89□□□□□ -0.35
RPAP1-211ENST00000568413 CLSPNQ9HAW4 1339 aa12.88□□□□□ -0.35
RPAP1-211ENST00000568413 NEUROD1Q13562 356 aa12.88□□□□□ -0.35
RPAP1-211ENST00000568413 TMEM94Q12767 1356 aa12.87□□□□□ -0.35
RPAP1-211ENST00000568413 PLEKHG1Q9ULL1 1385 aa12.87□□□□□ -0.35
RPAP1-211ENST00000568413 CCER1Q8TC90 406 aaPredicted RBP12.87□□□□□ -0.35
RPAP1-211ENST00000568413 NWD1Q149M9 1564 aa12.86□□□□□ -0.35
RPAP1-211ENST00000568413 NEXMIFQ5QGS0 1516 aa12.85□□□□□ -0.35
RPAP1-211ENST00000568413 DCAF11Q8TEB1 546 aa12.85□□□□□ -0.35
RPAP1-211ENST00000568413 TBX22Q9Y458 520 aa12.85□□□□□ -0.35
RPAP1-211ENST00000568413 ROBO1Q9Y6N7 1651 aa12.84□□□□□ -0.35
RPAP1-211ENST00000568413 PHF23Q9BUL5 403 aaPredicted RBP12.84□□□□□ -0.35
RPAP1-211ENST00000568413 KDM2AQ9Y2K7 1162 aa12.84□□□□□ -0.35
RPAP1-211ENST00000568413 KCNA6P17658 529 aa12.83□□□□□ -0.36
RPAP1-211ENST00000568413 PROSER2Q86WR7 435 aaPredicted RBP12.83□□□□□ -0.36
RPAP1-211ENST00000568413 PPLO60437 1756 aa12.83□□□□□ -0.36
RPAP1-211ENST00000568413 CHD2O14647 1828 aaKnown RBP12.83□□□□□ -0.36
RPAP1-211ENST00000568413 ADGRF5Q8IZF2 1346 aa12.82□□□□□ -0.36
RPAP1-211ENST00000568413 L3MBTL2Q969R5 705 aa12.81□□□□□ -0.36
RPAP1-211ENST00000568413 NKTRP30414 1462 aaKnown RBP12.8□□□□□ -0.36
RPAP1-211ENST00000568413 IFT172Q9UG01 1749 aa12.79□□□□□ -0.36
RPAP1-211ENST00000568413 TIMELESSQ9UNS1 1208 aa12.79□□□□□ -0.36
RPAP1-211ENST00000568413 TONSLQ96HA7 1378 aa12.79□□□□□ -0.36
RPAP1-211ENST00000568413 ADAMTS13Q76LX8 1427 aa12.79□□□□□ -0.36
RPAP1-211ENST00000568413 MYOM2P54296 1465 aa12.78□□□□□ -0.36
RPAP1-211ENST00000568413 SETBP1Q9Y6X0 1596 aa12.78□□□□□ -0.36
RPAP1-211ENST00000568413 PIK3R4Q99570 1358 aa12.78□□□□□ -0.36
RPAP1-211ENST00000568413 FAM135BQ49AJ0 1406 aa12.78□□□□□ -0.36
RPAP1-211ENST00000568413 DIP2AQ14689 1571 aa12.77□□□□□ -0.36
RPAP1-211ENST00000568413 C14orf93Q9H972 538 aaKnown RBP12.77□□□□□ -0.37
RPAP1-211ENST00000568413 NRXN1Q9ULB1 1477 aa12.77□□□□□ -0.37
RPAP1-211ENST00000568413 PHLPP1O60346 1717 aa12.76□□□□□ -0.37
RPAP1-211ENST00000568413 RGS17Q9UGC6 210 aaPredicted RBP12.76□□□□□ -0.37
RPAP1-211ENST00000568413 PIK3C2GO75747 1445 aa12.76□□□□□ -0.37
RPAP1-211ENST00000568413 MSH6P52701 1360 aa12.75□□□□□ -0.37
RPAP1-211ENST00000568413 CFAP70Q5T0N1 1121 aa12.75□□□□□ -0.37
RPAP1-211ENST00000568413 NRXN3Q9Y4C0 1643 aa12.75□□□□□ -0.37
RPAP1-211ENST00000568413 METP08581 1390 aa12.74□□□□□ -0.37
RPAP1-211ENST00000568413 AMOTL2Q9Y2J4 779 aa12.74□□□□□ -0.37
RPAP1-211ENST00000568413 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.74□□□□□ -0.37
RPAP1-211ENST00000568413 PTPRUQ92729 1446 aa12.73□□□□□ -0.37
RPAP1-211ENST00000568413 TMEM132EQ6IEE7 984 aa12.72□□□□□ -0.37
RPAP1-211ENST00000568413 C14orf37Q86TY3 774 aa12.72□□□□□ -0.37
RPAP1-211ENST00000568413 PRAG1Q86YV5 1406 aa12.71□□□□□ -0.37
RPAP1-211ENST00000568413 COL16A1Q07092 1604 aaPredicted RBP12.71□□□□□ -0.37
RPAP1-211ENST00000568413 SLAIN2Q9P270 581 aa12.71□□□□□ -0.37
RPAP1-211ENST00000568413 POTEAQ6S8J7 498 aa12.7□□□□□ -0.38
RPAP1-211ENST00000568413 SETD1AO15047 1707 aaKnown RBP12.7□□□□□ -0.38
RPAP1-211ENST00000568413 XRN1Q8IZH2 1706 aaKnown RBP12.7□□□□□ -0.38
RPAP1-211ENST00000568413 LAMC1P11047 1609 aa12.7□□□□□ -0.38
RPAP1-211ENST00000568413 STK26Q9P289 416 aa12.69□□□□□ -0.38
RPAP1-211ENST00000568413 LRPPRCP42704 1394 aaKnown RBP12.69□□□□□ -0.38
RPAP1-211ENST00000568413 ABCC11Q96J66 1382 aa12.69□□□□□ -0.38
RPAP1-211ENST00000568413 NBPF1Q3BBV0 1214 aa12.68□□□□□ -0.38
RPAP1-211ENST00000568413 NBPF8Q3BBV2 869 aa12.68□□□□□ -0.38
RPAP1-211ENST00000568413 SIRT1Q96EB6 747 aa12.68□□□□□ -0.38
RPAP1-211ENST00000568413 LRP6O75581 1613 aa12.67□□□□□ -0.38
RPAP1-211ENST00000568413 YTHDC2Q9H6S0 1430 aaKnown RBP12.67□□□□□ -0.38
RPAP1-211ENST00000568413 KIAA1210Q9ULL0 1709 aa12.67□□□□□ -0.38
RPAP1-211ENST00000568413 NCOA3Q9Y6Q9 1424 aa12.66□□□□□ -0.38
RPAP1-211ENST00000568413 JCADQ9P266 1359 aa12.66□□□□□ -0.38
RPAP1-211ENST00000568413 TRAK1Q9UPV9 953 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms