RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 MYO5BQ9ULV0 1848 aa22.73■■□□□ 1.23
SPG7-218ENST00000568205 HDGFP51858 240 aaKnown RBP22.73■■□□□ 1.23
SPG7-218ENST00000568205 TXNDC2Q86VQ3 553 aa22.73■■□□□ 1.23
SPG7-218ENST00000568205 ANKLE2Q86XL3 938 aa22.73■■□□□ 1.23
SPG7-218ENST00000568205 EID1Q9Y6B2 187 aa22.73■■□□□ 1.23
SPG7-218ENST00000568205 NEXMIFQ5QGS0 1516 aa22.72■■□□□ 1.23
SPG7-218ENST00000568205 LTKP29376 864 aa22.72■■□□□ 1.23
SPG7-218ENST00000568205 SCAF11Q99590 1463 aaKnown RBP22.72■■□□□ 1.23
SPG7-218ENST00000568205 NUTM2DQ5VT03 806 aaPredicted RBP22.71■■□□□ 1.23
SPG7-218ENST00000568205 TONSLQ96HA7 1378 aa22.71■■□□□ 1.23
SPG7-218ENST00000568205 PPP1R15AO75807 674 aaPredicted RBP22.7■■□□□ 1.22
SPG7-218ENST00000568205 L3MBTL2Q969R5 705 aa22.7■■□□□ 1.22
SPG7-218ENST00000568205 NCKAP5LQ9HCH0 1330 aa22.68■■□□□ 1.22
SPG7-218ENST00000568205 VGFO15240 615 aaPredicted RBP22.68■■□□□ 1.22
SPG7-218ENST00000568205 DCAF11Q8TEB1 546 aa22.68■■□□□ 1.22
SPG7-218ENST00000568205 STAC3Q96MF2 364 aa22.66■■□□□ 1.22
SPG7-218ENST00000568205 MYOM2P54296 1465 aa22.66■■□□□ 1.22
SPG7-218ENST00000568205 TIMELESSQ9UNS1 1208 aa22.65■■□□□ 1.22
SPG7-218ENST00000568205 KDM2AQ9Y2K7 1162 aa22.65■■□□□ 1.22
SPG7-218ENST00000568205 PLEKHG1Q9ULL1 1385 aa22.64■■□□□ 1.22
SPG7-218ENST00000568205 ADGRF5Q8IZF2 1346 aa22.64■■□□□ 1.22
SPG7-218ENST00000568205 PPLO60437 1756 aa22.64■■□□□ 1.22
SPG7-218ENST00000568205 MED14O60244 1454 aa22.63■■□□□ 1.21
SPG7-218ENST00000568205 NPHP4O75161 1426 aaPredicted RBP22.63■■□□□ 1.21
SPG7-218ENST00000568205 IFT172Q9UG01 1749 aa22.62■■□□□ 1.21
SPG7-218ENST00000568205 NRXN1Q9ULB1 1477 aa22.61■■□□□ 1.21
SPG7-218ENST00000568205 SENP3Q9H4L4 574 aaPredicted RBP22.6■■□□□ 1.21
SPG7-218ENST00000568205 POLR1AO95602 1720 aaPredicted RBP22.6■■□□□ 1.21
SPG7-218ENST00000568205 BCANQ96GW7 911 aa22.59■■□□□ 1.21
SPG7-218ENST00000568205 PIK3C2GO75747 1445 aa22.58■■□□□ 1.21
SPG7-218ENST00000568205 STRCQ7RTU9 1775 aa22.58■■□□□ 1.2
SPG7-218ENST00000568205 SETBP1Q9Y6X0 1596 aa22.57■■□□□ 1.2
SPG7-218ENST00000568205 PRAG1Q86YV5 1406 aa22.57■■□□□ 1.2
SPG7-218ENST00000568205 DMRT2Q9Y5R5 561 aa22.56■■□□□ 1.2
SPG7-218ENST00000568205 ADAMTS13Q76LX8 1427 aa22.56■■□□□ 1.2
SPG7-218ENST00000568205 SLC26A8Q96RN1 970 aa22.54■■□□□ 1.2
SPG7-218ENST00000568205 IQGAP1P46940 1657 aa22.54■■□□□ 1.2
SPG7-218ENST00000568205 NRXN3Q9Y4C0 1643 aa22.53■■□□□ 1.2
SPG7-218ENST00000568205 TBX22Q9Y458 520 aa22.52■■□□□ 1.2
SPG7-218ENST00000568205 C14orf93Q9H972 538 aaKnown RBP22.51■■□□□ 1.19
SPG7-218ENST00000568205 NBPF8Q3BBV2 869 aa22.5■■□□□ 1.19
SPG7-218ENST00000568205 CFAP70Q5T0N1 1121 aa22.5■■□□□ 1.19
SPG7-218ENST00000568205 DIP2AQ14689 1571 aa22.5■■□□□ 1.19
SPG7-218ENST00000568205 ALKQ9UM73 1620 aa22.49■■□□□ 1.19
SPG7-218ENST00000568205 METP08581 1390 aa22.46■■□□□ 1.19
SPG7-218ENST00000568205 LAMC1P11047 1609 aa22.45■■□□□ 1.18
SPG7-218ENST00000568205 PIK3R4Q99570 1358 aa22.44■■□□□ 1.18
SPG7-218ENST00000568205 ASXL1Q8IXJ9 1541 aa22.43■■□□□ 1.18
SPG7-218ENST00000568205 TMEM132EQ6IEE7 984 aa22.42■■□□□ 1.18
SPG7-218ENST00000568205 SETD1AO15047 1707 aaKnown RBP22.42■■□□□ 1.18
SPG7-218ENST00000568205 RALGAPBQ86X10 1494 aa22.41■■□□□ 1.18
SPG7-218ENST00000568205 NBPF1Q3BBV0 1214 aa22.41■■□□□ 1.18
SPG7-218ENST00000568205 ADGRB1O14514 1584 aa22.41■■□□□ 1.18
SPG7-218ENST00000568205 KIAA1210Q9ULL0 1709 aa22.4■■□□□ 1.18
SPG7-218ENST00000568205 PTPRUQ92729 1446 aa22.4■■□□□ 1.18
SPG7-218ENST00000568205 ROCK2O75116 1388 aaKnown RBP22.39■■□□□ 1.18
SPG7-218ENST00000568205 TRPM1Q7Z4N2 1603 aa22.39■■□□□ 1.18
SPG7-218ENST00000568205 KCNA6P17658 529 aa22.39■■□□□ 1.17
SPG7-218ENST00000568205 ZEB1P37275 1124 aaPredicted RBP22.39■■□□□ 1.17
SPG7-218ENST00000568205 LRPPRCP42704 1394 aaKnown RBP22.38■■□□□ 1.17
SPG7-218ENST00000568205 GPRASP1Q5JY77 1395 aa22.38■■□□□ 1.17
SPG7-218ENST00000568205 ZNF335Q9H4Z2 1342 aaPredicted RBP22.37■■□□□ 1.17
SPG7-218ENST00000568205 AMOTL2Q9Y2J4 779 aa22.37■■□□□ 1.17
SPG7-218ENST00000568205 YTHDC2Q9H6S0 1430 aaKnown RBP22.37■■□□□ 1.17
SPG7-218ENST00000568205 STK26Q9P289 416 aa22.35■■□□□ 1.17
SPG7-218ENST00000568205 NWD1Q149M9 1564 aa22.34■■□□□ 1.17
SPG7-218ENST00000568205 ABCC11Q96J66 1382 aa22.34■■□□□ 1.17
SPG7-218ENST00000568205 CARD11Q9BXL7 1154 aa22.33■■□□□ 1.17
SPG7-218ENST00000568205 TECPR2O15040 1411 aa22.32■■□□□ 1.16
SPG7-218ENST00000568205 XRN1Q8IZH2 1706 aaKnown RBP22.32■■□□□ 1.16
SPG7-218ENST00000568205 NKTRP30414 1462 aaKnown RBP22.31■■□□□ 1.16
SPG7-218ENST00000568205 TRAK1Q9UPV9 953 aa22.3■■□□□ 1.16
SPG7-218ENST00000568205 PTCH1Q13635 1447 aa22.3■■□□□ 1.16
SPG7-218ENST00000568205 CHD2O14647 1828 aaKnown RBP22.29■■□□□ 1.16
SPG7-218ENST00000568205 ROBO2Q9HCK4 1378 aa22.29■■□□□ 1.16
SPG7-218ENST00000568205 DLC1Q96QB1 1528 aa22.28■■□□□ 1.16
SPG7-218ENST00000568205 CPS1P31327 1500 aa22.27■■□□□ 1.16
SPG7-218ENST00000568205 SIRT1Q96EB6 747 aa22.27■■□□□ 1.16
SPG7-218ENST00000568205 FAM135BQ49AJ0 1406 aa22.26■■□□□ 1.15
SPG7-218ENST00000568205 LTBP4Q8N2S1 1624 aa22.26■■□□□ 1.15
SPG7-218ENST00000568205 STRCP1A6NGW2 1772 aa22.25■■□□□ 1.15
SPG7-218ENST00000568205 PROSER2Q86WR7 435 aaPredicted RBP22.25■■□□□ 1.15
SPG7-218ENST00000568205 KNDC1Q76NI1 1749 aa22.25■■□□□ 1.15
SPG7-218ENST00000568205 PRAM1Q96QH2 718 aa22.23■■□□□ 1.15
SPG7-218ENST00000568205 TMEM94Q12767 1356 aa22.23■■□□□ 1.15
SPG7-218ENST00000568205 EIF3AQ14152 1382 aaKnown RBP22.23■■□□□ 1.15
SPG7-218ENST00000568205 PLEKHH1Q9ULM0 1364 aa22.23■■□□□ 1.15
SPG7-218ENST00000568205 LRRC7Q96NW7 1537 aa22.22■■□□□ 1.15
SPG7-218ENST00000568205 WAPLQ7Z5K2 1190 aa22.22■■□□□ 1.15
SPG7-218ENST00000568205 POGKQ9P215 609 aa22.22■■□□□ 1.15
SPG7-218ENST00000568205 USP47Q96K76 1375 aa22.22■■□□□ 1.15
SPG7-218ENST00000568205 RBM33Q96EV2 1170 aaKnown RBP22.2■■□□□ 1.14
SPG7-218ENST00000568205 CENPJQ9HC77 1338 aaPredicted RBP22.19■■□□□ 1.14
SPG7-218ENST00000568205 ARHGEF28Q8N1W1 1705 aaKnown RBP22.18■■□□□ 1.14
SPG7-218ENST00000568205 NCOA3Q9Y6Q9 1424 aa22.18■■□□□ 1.14
SPG7-218ENST00000568205 SAFB2Q14151 953 aaKnown RBP eCLIP22.18■■□□□ 1.14
SPG7-218ENST00000568205 C14orf37Q86TY3 774 aa22.16■■□□□ 1.14
SPG7-218ENST00000568205 ADGRL3Q9HAR2 1447 aa22.15■■□□□ 1.14
SPG7-218ENST00000568205 EIF4G2P78344 907 aaKnown RBP eCLIP22.15■■□□□ 1.14
SPG7-218ENST00000568205 ST20-MTHFSA0A0A6YYL1 179 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms