RNA–Protein interactions for RNA: ENST00000567869.1

HERC2-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 2

Gene HERC2, Length 3,523 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-209ENST00000567869 PLIN1O60240 522 aa11.42□□□□□ -0.58
HERC2-209ENST00000567869 PREX2Q70Z35 1606 aa11.41□□□□□ -0.58
HERC2-209ENST00000567869 RGL3Q3MIN7 710 aa11.4□□□□□ -0.58
HERC2-209ENST00000567869 KLHL34Q8N239 644 aa11.4□□□□□ -0.58
HERC2-209ENST00000567869 BCORL1Q5H9F3 1711 aa11.39□□□□□ -0.59
HERC2-209ENST00000567869 CHRM1P11229 460 aaPredicted RBP11.39□□□□□ -0.59
HERC2-209ENST00000567869 AFAP1Q8N556 730 aa11.39□□□□□ -0.59
HERC2-209ENST00000567869 ARID4BQ4LE39 1312 aaPredicted RBP11.39□□□□□ -0.59
HERC2-209ENST00000567869 ARHGEF5Q12774 1597 aa11.39□□□□□ -0.59
HERC2-209ENST00000567869 MAP7D2Q96T17 732 aa11.39□□□□□ -0.59
HERC2-209ENST00000567869 ZCCHC11Q5TAX3 1644 aaKnown RBP11.39□□□□□ -0.59
HERC2-209ENST00000567869 PNISRQ8TF01 805 aaKnown RBP11.39□□□□□ -0.59
HERC2-209ENST00000567869 ZNF830Q96NB3 372 aaPredicted RBP11.38□□□□□ -0.59
HERC2-209ENST00000567869 ARHGEF12Q9NZN5 1544 aa11.38□□□□□ -0.59
HERC2-209ENST00000567869 KIAA1211Q6ZU35 1233 aa11.38□□□□□ -0.59
HERC2-209ENST00000567869 GOLGA6L3A6NEY3 463 aa11.38□□□□□ -0.59
HERC2-209ENST00000567869 OFD1O75665 1012 aa11.38□□□□□ -0.59
HERC2-209ENST00000567869 PLCH2O75038 1416 aa11.37□□□□□ -0.59
HERC2-209ENST00000567869 FAM161AQ3B820 660 aa11.37□□□□□ -0.59
HERC2-209ENST00000567869 ZHX1Q9UKY1 873 aaPredicted RBP11.37□□□□□ -0.59
HERC2-209ENST00000567869 PLEKHH2Q8IVE3 1493 aa11.37□□□□□ -0.59
HERC2-209ENST00000567869 KIF7Q2M1P5 1343 aa11.37□□□□□ -0.59
HERC2-209ENST00000567869 OSCARQ8IYS5 282 aa11.36□□□□□ -0.59
HERC2-209ENST00000567869 RCAN3Q9UKA8 241 aa11.36□□□□□ -0.59
HERC2-209ENST00000567869 MYO5CQ9NQX4 1742 aa11.36□□□□□ -0.59
HERC2-209ENST00000567869 CANXP27824 592 aaKnown RBP11.36□□□□□ -0.59
HERC2-209ENST00000567869 KTN1Q86UP2 1357 aaKnown RBP11.36□□□□□ -0.59
HERC2-209ENST00000567869 TRAPPC8Q9Y2L5 1435 aa11.36□□□□□ -0.59
HERC2-209ENST00000567869 MRE11P49959 708 aa11.35□□□□□ -0.59
HERC2-209ENST00000567869 E9PCH4 1651 aa11.35□□□□□ -0.59
HERC2-209ENST00000567869 UHRF1BP1LA0JNW5 1464 aa11.35□□□□□ -0.59
HERC2-209ENST00000567869 PAXIP1Q6ZW49 1069 aaPredicted RBP11.35□□□□□ -0.59
HERC2-209ENST00000567869 CARD11Q9BXL7 1154 aa11.35□□□□□ -0.59
HERC2-209ENST00000567869 SPAG9O60271 1321 aaKnown RBP11.34□□□□□ -0.59
HERC2-209ENST00000567869 PPP4R3BQ5MIZ7 849 aa11.34□□□□□ -0.59
HERC2-209ENST00000567869 FAM135AQ9P2D6 1515 aa11.33□□□□□ -0.6
HERC2-209ENST00000567869 USP47Q96K76 1375 aa11.33□□□□□ -0.6
HERC2-209ENST00000567869 NPM1P06748 294 aaKnown RBP eCLIP11.32□□□□□ -0.6
HERC2-209ENST00000567869 CRBNQ96SW2 442 aa11.31□□□□□ -0.6
HERC2-209ENST00000567869 GRPEL1Q9HAV7 217 aa11.31□□□□□ -0.6
HERC2-209ENST00000567869 CCDC144AA2RUR9 1427 aa11.31□□□□□ -0.6
HERC2-209ENST00000567869 ISY1Q9ULR0 285 aaKnown RBP11.31□□□□□ -0.6
HERC2-209ENST00000567869 VGFO15240 615 aaPredicted RBP11.3□□□□□ -0.6
HERC2-209ENST00000567869 CDCA7LQ96GN5 454 aa11.3□□□□□ -0.6
HERC2-209ENST00000567869 KDM5DQ9BY66 1539 aa11.3□□□□□ -0.6
HERC2-209ENST00000567869 PPP1R9BQ96SB3 815 aa11.3□□□□□ -0.6
HERC2-209ENST00000567869 SLKQ9H2G2 1235 aaPredicted RBP11.3□□□□□ -0.6
HERC2-209ENST00000567869 WDR7Q9Y4E6 1490 aa11.3□□□□□ -0.6
HERC2-209ENST00000567869 ST20-MTHFSA0A0A6YYL1 179 aa11.3□□□□□ -0.6
HERC2-209ENST00000567869 KIF20AO95235 890 aa11.29□□□□□ -0.6
HERC2-209ENST00000567869 MCM4P33991 863 aa11.29□□□□□ -0.6
HERC2-209ENST00000567869 NBPF1Q3BBV0 1214 aa11.29□□□□□ -0.6
HERC2-209ENST00000567869 ZMYM4Q5VZL5 1548 aa11.28□□□□□ -0.6
HERC2-209ENST00000567869 ASXL2Q76L83 1435 aa11.28□□□□□ -0.6
HERC2-209ENST00000567869 GZF1Q9H116 711 aaPredicted RBP11.28□□□□□ -0.6
HERC2-209ENST00000567869 ABCC1P33527 1531 aa11.28□□□□□ -0.6
HERC2-209ENST00000567869 MAST1Q9Y2H9 1570 aa11.28□□□□□ -0.6
HERC2-209ENST00000567869 PLA2R1Q13018 1463 aa11.27□□□□□ -0.6
HERC2-209ENST00000567869 KIF3BO15066 747 aa11.27□□□□□ -0.6
HERC2-209ENST00000567869 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.27□□□□□ -0.6
HERC2-209ENST00000567869 SCAPERQ9BY12 1400 aa11.27□□□□□ -0.6
HERC2-209ENST00000567869 GAS2L3Q86XJ1 694 aa11.27□□□□□ -0.61
HERC2-209ENST00000567869 MYH16Q9H6N6 1097 aa11.27□□□□□ -0.61
HERC2-209ENST00000567869 FANCAO15360 1455 aa11.27□□□□□ -0.61
HERC2-209ENST00000567869 DUOX2Q9NRD8 1548 aa11.27□□□□□ -0.61
HERC2-209ENST00000567869 MTERF4Q7Z6M4 381 aaKnown RBP11.27□□□□□ -0.61
HERC2-209ENST00000567869 FTSJ3Q8IY81 847 aaKnown RBP11.27□□□□□ -0.61
HERC2-209ENST00000567869 ROCK2O75116 1388 aaKnown RBP11.27□□□□□ -0.61
HERC2-209ENST00000567869 SPRYD3Q8NCJ5 442 aa11.26□□□□□ -0.61
HERC2-209ENST00000567869 CCDC94Q9BW85 323 aaPredicted RBP11.26□□□□□ -0.61
HERC2-209ENST00000567869 PRDM10Q9NQV6 1147 aa11.26□□□□□ -0.61
HERC2-209ENST00000567869 CENPQQ7L2Z9 268 aaPredicted RBP11.26□□□□□ -0.61
HERC2-209ENST00000567869 GTPBP4Q9BZE4 634 aaKnown RBP11.26□□□□□ -0.61
HERC2-209ENST00000567869 RTEL1-TNFRSF6BF6WH68 1400 aa11.25□□□□□ -0.61
HERC2-209ENST00000567869 UHRF1BP1Q6BDS2 1440 aa11.25□□□□□ -0.61
HERC2-209ENST00000567869 SEC24BO95487 1268 aa11.25□□□□□ -0.61
HERC2-209ENST00000567869 TEX2Q8IWB9 1127 aa11.25□□□□□ -0.61
HERC2-209ENST00000567869 ZNF692Q9BU19 519 aaPredicted RBP11.25□□□□□ -0.61
HERC2-209ENST00000567869 PLXNC1O60486 1568 aa11.24□□□□□ -0.61
HERC2-209ENST00000567869 INSRP06213 1382 aa11.24□□□□□ -0.61
HERC2-209ENST00000567869 ZNF500O60304 480 aaPredicted RBP11.24□□□□□ -0.61
HERC2-209ENST00000567869 NCLP19338 710 aaKnown RBP11.24□□□□□ -0.61
HERC2-209ENST00000567869 DDIT3P35638 169 aa11.24□□□□□ -0.61
HERC2-209ENST00000567869 KDM5CP41229 1560 aa11.24□□□□□ -0.61
HERC2-209ENST00000567869 ERBINQ96RT1 1412 aa11.24□□□□□ -0.61
HERC2-209ENST00000567869 DYNC1I1O14576 645 aa11.23□□□□□ -0.61
HERC2-209ENST00000567869 C20orf194Q5TEA3 1177 aa11.23□□□□□ -0.61
HERC2-209ENST00000567869 ADGRL1O94910 1474 aa11.23□□□□□ -0.61
HERC2-209ENST00000567869 RALGAPBQ86X10 1494 aa11.23□□□□□ -0.61
HERC2-209ENST00000567869 NCOA3Q9Y6Q9 1424 aa11.23□□□□□ -0.61
HERC2-209ENST00000567869 UNC13BO14795 1591 aa11.23□□□□□ -0.61
HERC2-209ENST00000567869 PDE3BQ13370 1112 aa11.23□□□□□ -0.61
HERC2-209ENST00000567869 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.23□□□□□ -0.61
HERC2-209ENST00000567869 ZSCAN30Q86W11 494 aa11.23□□□□□ -0.61
HERC2-209ENST00000567869 TRAK2O60296 914 aa11.23□□□□□ -0.61
HERC2-209ENST00000567869 ZFP91Q96JP5 570 aaPredicted RBP11.23□□□□□ -0.61
HERC2-209ENST00000567869 LETM1O95202 739 aaPredicted RBP11.22□□□□□ -0.61
HERC2-209ENST00000567869 FAM13BQ9NYF5 915 aa11.22□□□□□ -0.61
HERC2-209ENST00000567869 BRD4O60885 1362 aaPredicted RBP11.22□□□□□ -0.61
HERC2-209ENST00000567869 BLMP54132 1417 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms