RNA–Protein interactions for RNA: ENST00000567811.1

SMPD3-210, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-210ENST00000567811 NUTM2DQ5VT03 806 aaPredicted RBP10.76□□□□□ -0.69
SMPD3-210ENST00000567811 SLC4A1APQ9BWU0 796 aaKnown RBP10.76□□□□□ -0.69
SMPD3-210ENST00000567811 SENP3Q9H4L4 574 aaPredicted RBP10.76□□□□□ -0.69
SMPD3-210ENST00000567811 TMEM131LA2VDJ0 1609 aa10.76□□□□□ -0.69
SMPD3-210ENST00000567811 PROSER2Q86WR7 435 aaPredicted RBP10.75□□□□□ -0.69
SMPD3-210ENST00000567811 TBX22Q9Y458 520 aa10.75□□□□□ -0.69
SMPD3-210ENST00000567811 RIMS2Q9UQ26 1411 aa10.75□□□□□ -0.69
SMPD3-210ENST00000567811 ADGRB3O60242 1522 aa10.74□□□□□ -0.69
SMPD3-210ENST00000567811 ZNF326Q5BKZ1 582 aaKnown RBP10.74□□□□□ -0.69
SMPD3-210ENST00000567811 SCAF1Q9H7N4 1312 aaKnown RBP10.74□□□□□ -0.69
SMPD3-210ENST00000567811 HFM1A2PYH4 1435 aa10.74□□□□□ -0.69
SMPD3-210ENST00000567811 ACIN1Q9UKV3 1341 aaKnown RBP10.73□□□□□ -0.69
SMPD3-210ENST00000567811 LRRC7Q96NW7 1537 aa10.73□□□□□ -0.69
SMPD3-210ENST00000567811 SPHKAPQ2M3C7 1700 aa10.72□□□□□ -0.69
SMPD3-210ENST00000567811 PLEKHG1Q9ULL1 1385 aa10.72□□□□□ -0.69
SMPD3-210ENST00000567811 ZFYVE9O95405 1425 aa10.72□□□□□ -0.69
SMPD3-210ENST00000567811 CHD2O14647 1828 aaKnown RBP10.71□□□□□ -0.69
SMPD3-210ENST00000567811 KIF1BO60333 1816 aa10.71□□□□□ -0.69
SMPD3-210ENST00000567811 MPHOSPH9Q99550 1183 aa10.71□□□□□ -0.69
SMPD3-210ENST00000567811 XIRP1Q702N8 1843 aaKnown RBP10.7□□□□□ -0.7
SMPD3-210ENST00000567811 HSPA1LP34931 641 aa10.69□□□□□ -0.7
SMPD3-210ENST00000567811 FOXD1Q16676 465 aa10.69□□□□□ -0.7
SMPD3-210ENST00000567811 RBM33Q96EV2 1170 aaKnown RBP10.69□□□□□ -0.7
SMPD3-210ENST00000567811 VGFO15240 615 aaPredicted RBP10.68□□□□□ -0.7
SMPD3-210ENST00000567811 RPGRIP1LQ68CZ1 1315 aa10.67□□□□□ -0.7
SMPD3-210ENST00000567811 AMOTL2Q9Y2J4 779 aa10.67□□□□□ -0.7
SMPD3-210ENST00000567811 SETD5Q9C0A6 1442 aa10.67□□□□□ -0.7
SMPD3-210ENST00000567811 TMEM94Q12767 1356 aa10.66□□□□□ -0.7
SMPD3-210ENST00000567811 PIK3R4Q99570 1358 aa10.65□□□□□ -0.7
SMPD3-210ENST00000567811 ADAMTS13Q76LX8 1427 aa10.65□□□□□ -0.7
SMPD3-210ENST00000567811 HRCP23327 699 aa10.64□□□□□ -0.71
SMPD3-210ENST00000567811 RGL3Q3MIN7 710 aa10.64□□□□□ -0.71
SMPD3-210ENST00000567811 C14orf37Q86TY3 774 aa10.64□□□□□ -0.71
SMPD3-210ENST00000567811 C19orf44Q9H6X5 657 aa10.64□□□□□ -0.71
SMPD3-210ENST00000567811 SLAIN2Q9P270 581 aa10.64□□□□□ -0.71
SMPD3-210ENST00000567811 CLTCL1P53675 1640 aa10.64□□□□□ -0.71
SMPD3-210ENST00000567811 DISP3Q9P2K9 1392 aa10.64□□□□□ -0.71
SMPD3-210ENST00000567811 TRPM2O94759 1503 aa10.63□□□□□ -0.71
SMPD3-210ENST00000567811 ALKQ9UM73 1620 aa10.63□□□□□ -0.71
SMPD3-210ENST00000567811 MSH6P52701 1360 aa10.63□□□□□ -0.71
SMPD3-210ENST00000567811 NCOA3Q9Y6Q9 1424 aa10.62□□□□□ -0.71
SMPD3-210ENST00000567811 NKTRP30414 1462 aaKnown RBP10.61□□□□□ -0.71
SMPD3-210ENST00000567811 FAM135BQ49AJ0 1406 aa10.61□□□□□ -0.71
SMPD3-210ENST00000567811 ATF3P18847 181 aa10.61□□□□□ -0.71
SMPD3-210ENST00000567811 DIP2AQ14689 1571 aa10.6□□□□□ -0.71
SMPD3-210ENST00000567811 NWD1Q149M9 1564 aa10.6□□□□□ -0.71
SMPD3-210ENST00000567811 CADPS2Q86UW7 1296 aa10.6□□□□□ -0.71
SMPD3-210ENST00000567811 RAB3GAP2Q9H2M9 1393 aa10.6□□□□□ -0.71
SMPD3-210ENST00000567811 CCDC144AA2RUR9 1427 aa10.59□□□□□ -0.71
SMPD3-210ENST00000567811 PTPRUQ92729 1446 aa10.59□□□□□ -0.71
SMPD3-210ENST00000567811 NEXMIFQ5QGS0 1516 aa10.59□□□□□ -0.71
SMPD3-210ENST00000567811 METP08581 1390 aa10.59□□□□□ -0.71
SMPD3-210ENST00000567811 PPLO60437 1756 aa10.58□□□□□ -0.72
SMPD3-210ENST00000567811 SETBP1Q9Y6X0 1596 aa10.58□□□□□ -0.72
SMPD3-210ENST00000567811 NRXN3Q9Y4C0 1643 aa10.58□□□□□ -0.72
SMPD3-210ENST00000567811 ILDR2Q71H61 639 aa10.57□□□□□ -0.72
SMPD3-210ENST00000567811 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.57□□□□□ -0.72
SMPD3-210ENST00000567811 ADGRF5Q8IZF2 1346 aa10.57□□□□□ -0.72
SMPD3-210ENST00000567811 ANKRD30BQ9BXX2 1392 aa10.55□□□□□ -0.72
SMPD3-210ENST00000567811 ROBO1Q9Y6N7 1651 aa10.54□□□□□ -0.72
SMPD3-210ENST00000567811 SPATA31E1Q6ZUB1 1445 aa10.54□□□□□ -0.72
SMPD3-210ENST00000567811 TMEM132EQ6IEE7 984 aa10.53□□□□□ -0.72
SMPD3-210ENST00000567811 C14orf93Q9H972 538 aaKnown RBP10.53□□□□□ -0.72
SMPD3-210ENST00000567811 STK26Q9P289 416 aa10.53□□□□□ -0.72
SMPD3-210ENST00000567811 PHF23Q9BUL5 403 aaPredicted RBP10.52□□□□□ -0.73
SMPD3-210ENST00000567811 KDM2AQ9Y2K7 1162 aa10.52□□□□□ -0.73
SMPD3-210ENST00000567811 XRN1Q8IZH2 1706 aaKnown RBP10.52□□□□□ -0.73
SMPD3-210ENST00000567811 BRINP3Q76B58 766 aa10.51□□□□□ -0.73
SMPD3-210ENST00000567811 STAC3Q96MF2 364 aa10.51□□□□□ -0.73
SMPD3-210ENST00000567811 SETD1AO15047 1707 aaKnown RBP10.5□□□□□ -0.73
SMPD3-210ENST00000567811 PHLPP1O60346 1717 aa10.5□□□□□ -0.73
SMPD3-210ENST00000567811 IFT172Q9UG01 1749 aa10.5□□□□□ -0.73
SMPD3-210ENST00000567811 CFAP70Q5T0N1 1121 aa10.5□□□□□ -0.73
SMPD3-210ENST00000567811 WAPLQ7Z5K2 1190 aa10.5□□□□□ -0.73
SMPD3-210ENST00000567811 DCAF11Q8TEB1 546 aa10.5□□□□□ -0.73
SMPD3-210ENST00000567811 SIRT1Q96EB6 747 aa10.5□□□□□ -0.73
SMPD3-210ENST00000567811 ROBO2Q9HCK4 1378 aa10.5□□□□□ -0.73
SMPD3-210ENST00000567811 DCCP43146 1447 aa10.49□□□□□ -0.73
SMPD3-210ENST00000567811 MED1Q15648 1581 aaPredicted RBP10.48□□□□□ -0.73
SMPD3-210ENST00000567811 SOCS7O14512 581 aa10.48□□□□□ -0.73
SMPD3-210ENST00000567811 LRRC59Q96AG4 307 aaKnown RBP10.48□□□□□ -0.73
SMPD3-210ENST00000567811 DHX57Q6P158 1386 aaKnown RBP10.48□□□□□ -0.73
SMPD3-210ENST00000567811 ABCC11Q96J66 1382 aa10.48□□□□□ -0.73
SMPD3-210ENST00000567811 ORAI2Q96SN7 254 aa10.47□□□□□ -0.73
SMPD3-210ENST00000567811 LRPPRCP42704 1394 aaKnown RBP10.47□□□□□ -0.73
SMPD3-210ENST00000567811 JCADQ9P266 1359 aa10.47□□□□□ -0.73
SMPD3-210ENST00000567811 ADGRL3Q9HAR2 1447 aa10.47□□□□□ -0.73
SMPD3-210ENST00000567811 RGS17Q9UGC6 210 aaPredicted RBP10.46□□□□□ -0.73
SMPD3-210ENST00000567811 MST1RQ04912 1400 aa10.46□□□□□ -0.74
SMPD3-210ENST00000567811 PTCH1Q13635 1447 aa10.46□□□□□ -0.74
SMPD3-210ENST00000567811 NALCNQ8IZF0 1738 aa10.45□□□□□ -0.74
SMPD3-210ENST00000567811 PIK3C2GO75747 1445 aa10.45□□□□□ -0.74
SMPD3-210ENST00000567811 ESCO1Q5FWF5 840 aa10.45□□□□□ -0.74
SMPD3-210ENST00000567811 DDX17Q92841 729 aaKnown RBP10.45□□□□□ -0.74
SMPD3-210ENST00000567811 YTHDC2Q9H6S0 1430 aaKnown RBP10.44□□□□□ -0.74
SMPD3-210ENST00000567811 SPATA31A6Q5VVP1 1343 aa10.44□□□□□ -0.74
SMPD3-210ENST00000567811 POGKQ9P215 609 aa10.44□□□□□ -0.74
SMPD3-210ENST00000567811 C1orf167Q5SNV9 1468 aa10.43□□□□□ -0.74
SMPD3-210ENST00000567811 PRAG1Q86YV5 1406 aa10.43□□□□□ -0.74
SMPD3-210ENST00000567811 NUTM2FA1L443 756 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms