RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 ITGAEP38570 1179 aa28.83■■■□□ 2.21
GTF3C1-207ENST00000567806 ROCK1Q13464 1354 aa28.83■■■□□ 2.21
GTF3C1-207ENST00000567806 RBM33Q96EV2 1170 aaKnown RBP28.82■■■□□ 2.2
GTF3C1-207ENST00000567806 PPARGC1BQ86YN6 1023 aaKnown RBP28.79■■■□□ 2.2
GTF3C1-207ENST00000567806 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.79■■■□□ 2.2
GTF3C1-207ENST00000567806 FAM135BQ49AJ0 1406 aa28.78■■■□□ 2.2
GTF3C1-207ENST00000567806 RIMS2Q9UQ26 1411 aa28.78■■■□□ 2.2
GTF3C1-207ENST00000567806 XIRP1Q702N8 1843 aaKnown RBP28.78■■■□□ 2.2
GTF3C1-207ENST00000567806 PLEKHG1Q9ULL1 1385 aa28.77■■■□□ 2.2
GTF3C1-207ENST00000567806 ZFYVE9O95405 1425 aa28.76■■■□□ 2.19
GTF3C1-207ENST00000567806 NUP155O75694 1391 aa28.75■■■□□ 2.19
GTF3C1-207ENST00000567806 UNC13BO14795 1591 aa28.75■■■□□ 2.19
GTF3C1-207ENST00000567806 TBX22Q9Y458 520 aa28.74■■■□□ 2.19
GTF3C1-207ENST00000567806 GCC2Q8IWJ2 1684 aa28.73■■■□□ 2.19
GTF3C1-207ENST00000567806 NKTRP30414 1462 aaKnown RBP28.72■■■□□ 2.19
GTF3C1-207ENST00000567806 MSH6P52701 1360 aa28.72■■■□□ 2.19
GTF3C1-207ENST00000567806 TMEM131LA2VDJ0 1609 aa28.71■■■□□ 2.19
GTF3C1-207ENST00000567806 NUTM2DQ5VT03 806 aaPredicted RBP28.7■■■□□ 2.18
GTF3C1-207ENST00000567806 SLAIN2Q9P270 581 aa28.68■■■□□ 2.18
GTF3C1-207ENST00000567806 NWD1Q149M9 1564 aa28.67■■■□□ 2.18
GTF3C1-207ENST00000567806 E9PCH4 1651 aa28.67■■■□□ 2.18
GTF3C1-207ENST00000567806 MYO5BQ9ULV0 1848 aa28.66■■■□□ 2.18
GTF3C1-207ENST00000567806 IQGAP3Q86VI3 1631 aa28.65■■■□□ 2.18
GTF3C1-207ENST00000567806 C14orf37Q86TY3 774 aa28.64■■■□□ 2.18
GTF3C1-207ENST00000567806 ROBO1Q9Y6N7 1651 aa28.6■■■□□ 2.17
GTF3C1-207ENST00000567806 CHD2O14647 1828 aaKnown RBP28.59■■■□□ 2.17
GTF3C1-207ENST00000567806 RGS17Q9UGC6 210 aaPredicted RBP28.58■■■□□ 2.17
GTF3C1-207ENST00000567806 PIK3R4Q99570 1358 aa28.58■■■□□ 2.17
GTF3C1-207ENST00000567806 ADAMTS13Q76LX8 1427 aa28.58■■■□□ 2.17
GTF3C1-207ENST00000567806 NCOA3Q9Y6Q9 1424 aa28.58■■■□□ 2.17
GTF3C1-207ENST00000567806 ZNF326Q5BKZ1 582 aaKnown RBP28.55■■■□□ 2.16
GTF3C1-207ENST00000567806 C19orf44Q9H6X5 657 aa28.55■■■□□ 2.16
GTF3C1-207ENST00000567806 AMOTL2Q9Y2J4 779 aa28.54■■■□□ 2.16
GTF3C1-207ENST00000567806 ATF3P18847 181 aa28.53■■■□□ 2.16
GTF3C1-207ENST00000567806 CADPS2Q86UW7 1296 aa28.53■■■□□ 2.16
GTF3C1-207ENST00000567806 DIP2AQ14689 1571 aa28.52■■■□□ 2.16
GTF3C1-207ENST00000567806 JCADQ9P266 1359 aa28.48■■■□□ 2.15
GTF3C1-207ENST00000567806 TRPM2O94759 1503 aa28.47■■■□□ 2.15
GTF3C1-207ENST00000567806 RRBP1Q9P2E9 1410 aaKnown RBP28.44■■■□□ 2.14
GTF3C1-207ENST00000567806 PHLPP1O60346 1717 aa28.44■■■□□ 2.14
GTF3C1-207ENST00000567806 POTEAQ6S8J7 498 aa28.44■■■□□ 2.14
GTF3C1-207ENST00000567806 PTPRUQ92729 1446 aa28.43■■■□□ 2.14
GTF3C1-207ENST00000567806 TRIM52Q96A61 297 aa28.42■■■□□ 2.14
GTF3C1-207ENST00000567806 SPHKAPQ2M3C7 1700 aa28.41■■■□□ 2.14
GTF3C1-207ENST00000567806 NAIPQ13075 1403 aa28.4■■■□□ 2.14
GTF3C1-207ENST00000567806 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.39■■■□□ 2.14
GTF3C1-207ENST00000567806 SETBP1Q9Y6X0 1596 aa28.36■■■□□ 2.13
GTF3C1-207ENST00000567806 SPATA31A6Q5VVP1 1343 aa28.35■■■□□ 2.13
GTF3C1-207ENST00000567806 METP08581 1390 aa28.35■■■□□ 2.13
GTF3C1-207ENST00000567806 MEX3CQ5U5Q3 659 aaKnown RBP28.34■■■□□ 2.13
GTF3C1-207ENST00000567806 BRINP3Q76B58 766 aa28.34■■■□□ 2.13
GTF3C1-207ENST00000567806 COL16A1Q07092 1604 aaPredicted RBP28.32■■■□□ 2.12
GTF3C1-207ENST00000567806 VGFO15240 615 aaPredicted RBP28.31■■■□□ 2.12
GTF3C1-207ENST00000567806 SLC4A1APQ9BWU0 796 aaKnown RBP28.31■■■□□ 2.12
GTF3C1-207ENST00000567806 DCCP43146 1447 aa28.31■■■□□ 2.12
GTF3C1-207ENST00000567806 NRXN3Q9Y4C0 1643 aa28.31■■■□□ 2.12
GTF3C1-207ENST00000567806 CLTCL1P53675 1640 aa28.3■■■□□ 2.12
GTF3C1-207ENST00000567806 AHDC1Q5TGY3 1603 aaPredicted RBP28.28■■■□□ 2.12
GTF3C1-207ENST00000567806 HFM1A2PYH4 1435 aa28.27■■■□□ 2.12
GTF3C1-207ENST00000567806 NEXMIFQ5QGS0 1516 aa28.27■■■□□ 2.12
GTF3C1-207ENST00000567806 XRN1Q8IZH2 1706 aaKnown RBP28.26■■■□□ 2.12
GTF3C1-207ENST00000567806 RPGRIP1LQ68CZ1 1315 aa28.25■■■□□ 2.11
GTF3C1-207ENST00000567806 ZNF772Q68DY9 489 aaPredicted RBP28.24■■■□□ 2.11
GTF3C1-207ENST00000567806 KIF1BO60333 1816 aa28.24■■■□□ 2.11
GTF3C1-207ENST00000567806 NUTM2BA6NNL0 878 aaPredicted RBP28.23■■■□□ 2.11
GTF3C1-207ENST00000567806 NUTM2EB1AL46 878 aaPredicted RBP28.23■■■□□ 2.11
GTF3C1-207ENST00000567806 NUTM2AQ8IVF1 878 aaPredicted RBP28.23■■■□□ 2.11
GTF3C1-207ENST00000567806 MST1RQ04912 1400 aa28.22■■■□□ 2.11
GTF3C1-207ENST00000567806 LRRC59Q96AG4 307 aaKnown RBP28.21■■■□□ 2.11
GTF3C1-207ENST00000567806 LRP6O75581 1613 aa28.21■■■□□ 2.11
GTF3C1-207ENST00000567806 ADGRL3Q9HAR2 1447 aa28.2■■■□□ 2.11
GTF3C1-207ENST00000567806 ASXL1Q8IXJ9 1541 aa28.18■■■□□ 2.1
GTF3C1-207ENST00000567806 SHPRHQ149N8 1683 aa28.16■■■□□ 2.1
GTF3C1-207ENST00000567806 FOXD1Q16676 465 aa28.15■■■□□ 2.1
GTF3C1-207ENST00000567806 SETD5Q9C0A6 1442 aa28.15■■■□□ 2.1
GTF3C1-207ENST00000567806 DDX17Q92841 729 aaKnown RBP28.14■■■□□ 2.1
GTF3C1-207ENST00000567806 ROBO2Q9HCK4 1378 aa28.11■■■□□ 2.09
GTF3C1-207ENST00000567806 PTCH1Q13635 1447 aa28.1■■■□□ 2.09
GTF3C1-207ENST00000567806 RXRBP28702 533 aa28.1■■■□□ 2.09
GTF3C1-207ENST00000567806 C1orf167Q5SNV9 1468 aa28.08■■■□□ 2.09
GTF3C1-207ENST00000567806 RGL3Q3MIN7 710 aa28.08■■■□□ 2.09
GTF3C1-207ENST00000567806 MPHOSPH9Q99550 1183 aa28.07■■■□□ 2.08
GTF3C1-207ENST00000567806 NALCNQ8IZF0 1738 aa28.06■■■□□ 2.08
GTF3C1-207ENST00000567806 ORAI2Q96SN7 254 aa28.06■■■□□ 2.08
GTF3C1-207ENST00000567806 AFF2P51816 1311 aa28.06■■■□□ 2.08
GTF3C1-207ENST00000567806 NHSL1Q5SYE7 1610 aa28.06■■■□□ 2.08
GTF3C1-207ENST00000567806 CCDC144AA2RUR9 1427 aa28.05■■■□□ 2.08
GTF3C1-207ENST00000567806 PNPLA6Q8IY17 1366 aa28.03■■■□□ 2.08
GTF3C1-207ENST00000567806 ADGRF5Q8IZF2 1346 aa28.03■■■□□ 2.08
GTF3C1-207ENST00000567806 C8orf37Q96NL8 207 aa28.03■■■□□ 2.08
GTF3C1-207ENST00000567806 PPLO60437 1756 aa28.01■■■□□ 2.07
GTF3C1-207ENST00000567806 SETD1AO15047 1707 aaKnown RBP28.01■■■□□ 2.07
GTF3C1-207ENST00000567806 PRAG1Q86YV5 1406 aa28.01■■■□□ 2.07
GTF3C1-207ENST00000567806 STK26Q9P289 416 aa28■■■□□ 2.07
GTF3C1-207ENST00000567806 ANKRD30BQ9BXX2 1392 aa27.99■■■□□ 2.07
GTF3C1-207ENST00000567806 SOS2Q07890 1332 aaPredicted RBP27.98■■■□□ 2.07
GTF3C1-207ENST00000567806 ACIN1Q9UKV3 1341 aaKnown RBP27.98■■■□□ 2.07
GTF3C1-207ENST00000567806 NGLY1Q96IV0 654 aa27.98■■■□□ 2.07
GTF3C1-207ENST00000567806 QTRT2Q9H974 415 aaKnown RBP27.98■■■□□ 2.07
GTF3C1-207ENST00000567806 ADAMTS2O95450 1211 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 930.5 ms