RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	NAIP	Q13075	1403 aa		10.42	□□□□□ -0.74
SF3B3-209	ENST00000567635	SLC26A8	Q96RN1	970 aa		10.42	□□□□□ -0.74
SF3B3-209	ENST00000567635	TMEM131L	A2VDJ0	1609 aa		10.42	□□□□□ -0.74
SF3B3-209	ENST00000567635	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	10.41	□□□□□ -0.74
SF3B3-209	ENST00000567635	TRIM52	Q96A61	297 aa		10.41	□□□□□ -0.74
SF3B3-209	ENST00000567635	LRRC7	Q96NW7	1537 aa		10.4	□□□□□ -0.74
SF3B3-209	ENST00000567635	PPP1R15A	O75807	674 aa	Predicted RBP	10.4	□□□□□ -0.74
SF3B3-209	ENST00000567635	KCNA6	P17658	529 aa		10.4	□□□□□ -0.74
SF3B3-209	ENST00000567635	PIP4K2B	P78356	416 aa		10.4	□□□□□ -0.74
SF3B3-209	ENST00000567635	RIMS2	Q9UQ26	1411 aa		10.4	□□□□□ -0.75
SF3B3-209	ENST00000567635	SCAF1	Q9H7N4	1312 aa	Known RBP	10.39	□□□□□ -0.75
SF3B3-209	ENST00000567635	SPHKAP	Q2M3C7	1700 aa		10.39	□□□□□ -0.75
SF3B3-209	ENST00000567635	XIRP1	Q702N8	1843 aa	Known RBP	10.39	□□□□□ -0.75
SF3B3-209	ENST00000567635	HFM1	A2PYH4	1435 aa		10.39	□□□□□ -0.75
SF3B3-209	ENST00000567635	ZFYVE9	O95405	1425 aa		10.39	□□□□□ -0.75
SF3B3-209	ENST00000567635	PROSER2	Q86WR7	435 aa	Predicted RBP	10.38	□□□□□ -0.75
SF3B3-209	ENST00000567635	TBX22	Q9Y458	520 aa		10.38	□□□□□ -0.75
SF3B3-209	ENST00000567635	PLEKHG1	Q9ULL1	1385 aa		10.38	□□□□□ -0.75
SF3B3-209	ENST00000567635	CHD2	O14647	1828 aa	Known RBP	10.37	□□□□□ -0.75
SF3B3-209	ENST00000567635	NUTM2D	Q5VT03	806 aa	Predicted RBP	10.37	□□□□□ -0.75
SF3B3-209	ENST00000567635	KIF1B	O60333	1816 aa		10.37	□□□□□ -0.75
SF3B3-209	ENST00000567635	SLC4A1AP	Q9BWU0	796 aa	Known RBP	10.36	□□□□□ -0.75
SF3B3-209	ENST00000567635	HSPA1L	P34931	641 aa		10.35	□□□□□ -0.75
SF3B3-209	ENST00000567635	ZNF326	Q5BKZ1	582 aa	Known RBP	10.35	□□□□□ -0.75
SF3B3-209	ENST00000567635	ALK	Q9UM73	1620 aa		10.33	□□□□□ -0.76
SF3B3-209	ENST00000567635	TMEM94	Q12767	1356 aa		10.33	□□□□□ -0.76
SF3B3-209	ENST00000567635	ACIN1	Q9UKV3	1341 aa	Known RBP	10.33	□□□□□ -0.76
SF3B3-209	ENST00000567635	DISP3	Q9P2K9	1392 aa		10.32	□□□□□ -0.76
SF3B3-209	ENST00000567635	RBM33	Q96EV2	1170 aa	Known RBP	10.32	□□□□□ -0.76
SF3B3-209	ENST00000567635	CLTCL1	P53675	1640 aa		10.32	□□□□□ -0.76
SF3B3-209	ENST00000567635	MPHOSPH9	Q99550	1183 aa		10.31	□□□□□ -0.76
SF3B3-209	ENST00000567635	TRPM2	O94759	1503 aa		10.31	□□□□□ -0.76
SF3B3-209	ENST00000567635	ADAMTS13	Q76LX8	1427 aa		10.31	□□□□□ -0.76
SF3B3-209	ENST00000567635	NWD1	Q149M9	1564 aa		10.31	□□□□□ -0.76
SF3B3-209	ENST00000567635	NKTR	P30414	1462 aa	Known RBP	10.3	□□□□□ -0.76
SF3B3-209	ENST00000567635	PIK3R4	Q99570	1358 aa		10.3	□□□□□ -0.76
SF3B3-209	ENST00000567635	DIP2A	Q14689	1571 aa		10.3	□□□□□ -0.76
SF3B3-209	ENST00000567635	VGF	O15240	615 aa	Predicted RBP	10.29	□□□□□ -0.76
SF3B3-209	ENST00000567635	AMOTL2	Q9Y2J4	779 aa		10.29	□□□□□ -0.76
SF3B3-209	ENST00000567635	SETD5	Q9C0A6	1442 aa		10.29	□□□□□ -0.76
SF3B3-209	ENST00000567635	RPGRIP1L	Q68CZ1	1315 aa		10.29	□□□□□ -0.76
SF3B3-209	ENST00000567635	MSH6	P52701	1360 aa		10.28	□□□□□ -0.76
SF3B3-209	ENST00000567635	NCOA3	Q9Y6Q9	1424 aa		10.28	□□□□□ -0.76
SF3B3-209	ENST00000567635	C14orf37	Q86TY3	774 aa		10.28	□□□□□ -0.76
SF3B3-209	ENST00000567635	SLAIN2	Q9P270	581 aa		10.28	□□□□□ -0.76
SF3B3-209	ENST00000567635	FAM135B	Q49AJ0	1406 aa		10.27	□□□□□ -0.77
SF3B3-209	ENST00000567635	C19orf44	Q9H6X5	657 aa		10.27	□□□□□ -0.77
SF3B3-209	ENST00000567635	NEXMIF	Q5QGS0	1516 aa		10.27	□□□□□ -0.77
SF3B3-209	ENST00000567635	SETBP1	Q9Y6X0	1596 aa		10.26	□□□□□ -0.77
SF3B3-209	ENST00000567635	NRXN3	Q9Y4C0	1643 aa		10.26	□□□□□ -0.77
SF3B3-209	ENST00000567635	PTPRU	Q92729	1446 aa		10.25	□□□□□ -0.77
SF3B3-209	ENST00000567635	PPL	O60437	1756 aa		10.25	□□□□□ -0.77
SF3B3-209	ENST00000567635	ATF3	P18847	181 aa		10.25	□□□□□ -0.77
SF3B3-209	ENST00000567635	MET	P08581	1390 aa		10.25	□□□□□ -0.77
SF3B3-209	ENST00000567635	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	10.24	□□□□□ -0.77
SF3B3-209	ENST00000567635	RGL3	Q3MIN7	710 aa		10.24	□□□□□ -0.77
SF3B3-209	ENST00000567635	ILDR2	Q71H61	639 aa		10.24	□□□□□ -0.77
SF3B3-209	ENST00000567635	CADPS2	Q86UW7	1296 aa		10.24	□□□□□ -0.77
SF3B3-209	ENST00000567635	ROBO1	Q9Y6N7	1651 aa		10.24	□□□□□ -0.77
SF3B3-209	ENST00000567635	CCDC144A	A2RUR9	1427 aa		10.24	□□□□□ -0.77
SF3B3-209	ENST00000567635	RAB3GAP2	Q9H2M9	1393 aa		10.23	□□□□□ -0.77
SF3B3-209	ENST00000567635	HRC	P23327	699 aa		10.22	□□□□□ -0.77
SF3B3-209	ENST00000567635	XRN1	Q8IZH2	1706 aa	Known RBP	10.21	□□□□□ -0.77
SF3B3-209	ENST00000567635	SOCS7	O14512	581 aa		10.21	□□□□□ -0.77
SF3B3-209	ENST00000567635	MED1	Q15648	1581 aa	Predicted RBP	10.21	□□□□□ -0.78
SF3B3-209	ENST00000567635	PHLPP1	O60346	1717 aa		10.2	□□□□□ -0.78
SF3B3-209	ENST00000567635	SPATA31E1	Q6ZUB1	1445 aa		10.2	□□□□□ -0.78
SF3B3-209	ENST00000567635	ANKRD30B	Q9BXX2	1392 aa		10.2	□□□□□ -0.78
SF3B3-209	ENST00000567635	SETD1A	O15047	1707 aa	Known RBP	10.19	□□□□□ -0.78
SF3B3-209	ENST00000567635	ADGRF5	Q8IZF2	1346 aa		10.19	□□□□□ -0.78
SF3B3-209	ENST00000567635	IFT172	Q9UG01	1749 aa		10.19	□□□□□ -0.78
SF3B3-209	ENST00000567635	DCC	P43146	1447 aa		10.17	□□□□□ -0.78
SF3B3-209	ENST00000567635	BRINP3	Q76B58	766 aa		10.16	□□□□□ -0.78
SF3B3-209	ENST00000567635	STK26	Q9P289	416 aa		10.16	□□□□□ -0.78
SF3B3-209	ENST00000567635	ADGRL3	Q9HAR2	1447 aa		10.16	□□□□□ -0.78
SF3B3-209	ENST00000567635	ROBO2	Q9HCK4	1378 aa		10.15	□□□□□ -0.78
SF3B3-209	ENST00000567635	TMEM132E	Q6IEE7	984 aa		10.15	□□□□□ -0.78
SF3B3-209	ENST00000567635	NALCN	Q8IZF0	1738 aa		10.15	□□□□□ -0.78
SF3B3-209	ENST00000567635	JCAD	Q9P266	1359 aa		10.14	□□□□□ -0.79
SF3B3-209	ENST00000567635	C14orf93	Q9H972	538 aa	Known RBP	10.14	□□□□□ -0.79
SF3B3-209	ENST00000567635	MST1R	Q04912	1400 aa		10.14	□□□□□ -0.79
SF3B3-209	ENST00000567635	PTCH1	Q13635	1447 aa		10.14	□□□□□ -0.79
SF3B3-209	ENST00000567635	WAPL	Q7Z5K2	1190 aa		10.13	□□□□□ -0.79
SF3B3-209	ENST00000567635	COL16A1	Q07092	1604 aa	Predicted RBP	10.13	□□□□□ -0.79
SF3B3-209	ENST00000567635	PRAG1	Q86YV5	1406 aa		10.13	□□□□□ -0.79
SF3B3-209	ENST00000567635	LRPPRC	P42704	1394 aa	Known RBP	10.13	□□□□□ -0.79
SF3B3-209	ENST00000567635	ABCC11	Q96J66	1382 aa		10.13	□□□□□ -0.79
SF3B3-209	ENST00000567635	AHDC1	Q5TGY3	1603 aa	Predicted RBP	10.12	□□□□□ -0.79
SF3B3-209	ENST00000567635	CFAP70	Q5T0N1	1121 aa		10.12	□□□□□ -0.79
SF3B3-209	ENST00000567635	RGS17	Q9UGC6	210 aa	Predicted RBP	10.12	□□□□□ -0.79
SF3B3-209	ENST00000567635	KDM2A	Q9Y2K7	1162 aa		10.12	□□□□□ -0.79
SF3B3-209	ENST00000567635	PIK3C2G	O75747	1445 aa		10.12	□□□□□ -0.79
SF3B3-209	ENST00000567635	DCAF11	Q8TEB1	546 aa		10.11	□□□□□ -0.79
SF3B3-209	ENST00000567635	LRRC59	Q96AG4	307 aa	Known RBP	10.11	□□□□□ -0.79
SF3B3-209	ENST00000567635	SIRT1	Q96EB6	747 aa		10.11	□□□□□ -0.79
SF3B3-209	ENST00000567635	STAC3	Q96MF2	364 aa		10.11	□□□□□ -0.79
SF3B3-209	ENST00000567635	ASXL1	Q8IXJ9	1541 aa		10.11	□□□□□ -0.79
SF3B3-209	ENST00000567635	DHX57	Q6P158	1386 aa	Known RBP	10.11	□□□□□ -0.79
SF3B3-209	ENST00000567635	C1orf167	Q5SNV9	1468 aa		10.1	□□□□□ -0.79
SF3B3-209	ENST00000567635	SPATA31A6	Q5VVP1	1343 aa		10.1	□□□□□ -0.79

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