RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 CAMSAP1Q5T5Y3 1602 aa18.04■□□□□ 0.48
LINC00563-201ENST00000566370 RPGRIP1LQ68CZ1 1315 aa18.03■□□□□ 0.48
LINC00563-201ENST00000566370 DIP2CQ9Y2E4 1556 aa18.03■□□□□ 0.48
LINC00563-201ENST00000566370 RICTORQ6R327 1708 aa18.03■□□□□ 0.48
LINC00563-201ENST00000566370 KDM5AP29375 1690 aaKnown RBP18.02■□□□□ 0.48
LINC00563-201ENST00000566370 ABCC3O15438 1527 aa18.02■□□□□ 0.48
LINC00563-201ENST00000566370 GGT6Q6P531 493 aa18.01■□□□□ 0.47
LINC00563-201ENST00000566370 PLPPR3Q6T4P5 718 aa18.01■□□□□ 0.47
LINC00563-201ENST00000566370 PNISRQ8TF01 805 aaKnown RBP18.01■□□□□ 0.47
LINC00563-201ENST00000566370 MROH2AA6NES4 1674 aa18.01■□□□□ 0.47
LINC00563-201ENST00000566370 BCANQ96GW7 911 aa18■□□□□ 0.47
LINC00563-201ENST00000566370 SETBP1Q9Y6X0 1596 aa18■□□□□ 0.47
LINC00563-201ENST00000566370 ZMYM4Q5VZL5 1548 aa18■□□□□ 0.47
LINC00563-201ENST00000566370 SMG6Q86US8 1419 aaKnown RBP18■□□□□ 0.47
LINC00563-201ENST00000566370 INSRP06213 1382 aa18■□□□□ 0.47
LINC00563-201ENST00000566370 NRXN1Q9ULB1 1477 aa17.99■□□□□ 0.47
LINC00563-201ENST00000566370 NPATQ14207 1427 aa17.99■□□□□ 0.47
LINC00563-201ENST00000566370 LRPPRCP42704 1394 aaKnown RBP17.99■□□□□ 0.47
LINC00563-201ENST00000566370 UGGT1Q9NYU2 1555 aa17.98■□□□□ 0.47
LINC00563-201ENST00000566370 KNSTRNQ9Y448 316 aa17.98■□□□□ 0.47
LINC00563-201ENST00000566370 PPLO60437 1756 aa17.98■□□□□ 0.47
LINC00563-201ENST00000566370 CHGAP10645 457 aaKnown RBP17.98■□□□□ 0.47
LINC00563-201ENST00000566370 PANK3Q9H999 370 aa17.98■□□□□ 0.47
LINC00563-201ENST00000566370 RIMBP3CA6NJZ7 1639 aa17.97■□□□□ 0.47
LINC00563-201ENST00000566370 RIMBP3BA6NNM3 1639 aa17.97■□□□□ 0.47
LINC00563-201ENST00000566370 RIMBP3Q9UFD9 1639 aa17.97■□□□□ 0.47
LINC00563-201ENST00000566370 MYO3AQ8NEV4 1616 aa17.96■□□□□ 0.47
LINC00563-201ENST00000566370 ARHGAP31Q2M1Z3 1444 aa17.96■□□□□ 0.47
LINC00563-201ENST00000566370 PER1O15534 1290 aaPredicted RBP17.96■□□□□ 0.47
LINC00563-201ENST00000566370 NUDCQ9Y266 331 aa17.95■□□□□ 0.46
LINC00563-201ENST00000566370 SBNO2Q9Y2G9 1366 aa17.94■□□□□ 0.46
LINC00563-201ENST00000566370 NOS1P29475 1434 aa17.93■□□□□ 0.46
LINC00563-201ENST00000566370 RAPGEF3O95398 923 aa17.93■□□□□ 0.46
LINC00563-201ENST00000566370 CYB5RLQ6IPT4 315 aa17.93■□□□□ 0.46
LINC00563-201ENST00000566370 PDE3BQ13370 1112 aa17.92■□□□□ 0.46
LINC00563-201ENST00000566370 DIP2BQ9P265 1576 aa17.92■□□□□ 0.46
LINC00563-201ENST00000566370 ASXL1Q8IXJ9 1541 aa17.92■□□□□ 0.46
LINC00563-201ENST00000566370 PIK3C2BO00750 1634 aa17.92■□□□□ 0.46
LINC00563-201ENST00000566370 NPC1L1Q9UHC9 1359 aa17.91■□□□□ 0.46
LINC00563-201ENST00000566370 ADGRF5Q8IZF2 1346 aa17.91■□□□□ 0.46
LINC00563-201ENST00000566370 CC2D1BQ5T0F9 858 aaKnown RBP17.9■□□□□ 0.46
LINC00563-201ENST00000566370 CFAP70Q5T0N1 1121 aa17.9■□□□□ 0.46
LINC00563-201ENST00000566370 PPP4R2Q9NY27 417 aa17.9■□□□□ 0.46
LINC00563-201ENST00000566370 VGFO15240 615 aaPredicted RBP17.89■□□□□ 0.46
LINC00563-201ENST00000566370 PIK3C2GO75747 1445 aa17.89■□□□□ 0.45
LINC00563-201ENST00000566370 SLC52A1Q9NWF4 448 aa17.89■□□□□ 0.45
LINC00563-201ENST00000566370 MYOM1P52179 1685 aa17.88■□□□□ 0.45
LINC00563-201ENST00000566370 REREQ9P2R6 1566 aa17.88■□□□□ 0.45
LINC00563-201ENST00000566370 CFAP65Q6ZU64 1925 aaKnown RBP17.88■□□□□ 0.45
LINC00563-201ENST00000566370 PPP6R1Q9UPN7 881 aa17.88■□□□□ 0.45
LINC00563-201ENST00000566370 CENPJQ9HC77 1338 aaPredicted RBP17.87■□□□□ 0.45
LINC00563-201ENST00000566370 FAM69CQ0P6D2 419 aa17.87■□□□□ 0.45
LINC00563-201ENST00000566370 C14orf93Q9H972 538 aaKnown RBP17.86■□□□□ 0.45
LINC00563-201ENST00000566370 YEATS2Q9ULM3 1422 aa17.84■□□□□ 0.45
LINC00563-201ENST00000566370 PREX1Q8TCU6 1659 aa17.84■□□□□ 0.45
LINC00563-201ENST00000566370 QRICH2Q9H0J4 1663 aa17.84■□□□□ 0.45
LINC00563-201ENST00000566370 ERVK-7P63135 1459 aa17.84■□□□□ 0.45
LINC00563-201ENST00000566370 WDR43Q15061 677 aaKnown RBP eCLIP17.84■□□□□ 0.45
LINC00563-201ENST00000566370 SIGLEC1Q9BZZ2 1709 aa17.84■□□□□ 0.45
LINC00563-201ENST00000566370 AGLP35573 1532 aa17.83■□□□□ 0.45
LINC00563-201ENST00000566370 ZFYVE9O95405 1425 aa17.83■□□□□ 0.44
LINC00563-201ENST00000566370 BLMP54132 1417 aaPredicted RBP17.83■□□□□ 0.44
LINC00563-201ENST00000566370 NEXMIFQ5QGS0 1516 aa17.82■□□□□ 0.44
LINC00563-201ENST00000566370 PUS7Q96PZ0 661 aaKnown RBP17.81■□□□□ 0.44
LINC00563-201ENST00000566370 TSHZ2Q9NRE2 1034 aa17.81■□□□□ 0.44
LINC00563-201ENST00000566370 TSPOAP1O95153 1857 aa17.8■□□□□ 0.44
LINC00563-201ENST00000566370 ADGRB1O14514 1584 aa17.8■□□□□ 0.44
LINC00563-201ENST00000566370 IRX6P78412 446 aaPredicted RBP17.8■□□□□ 0.44
LINC00563-201ENST00000566370 PPP2R1AP30153 589 aa17.79■□□□□ 0.44
LINC00563-201ENST00000566370 AMER1Q5JTC6 1135 aaPredicted RBP17.79■□□□□ 0.44
LINC00563-201ENST00000566370 RNF123Q5XPI4 1314 aa17.77■□□□□ 0.44
LINC00563-201ENST00000566370 TRAK1Q9UPV9 953 aa17.76■□□□□ 0.43
LINC00563-201ENST00000566370 EVC2Q86UK5 1308 aa17.75■□□□□ 0.43
LINC00563-201ENST00000566370 TMEM131LA2VDJ0 1609 aa17.75■□□□□ 0.43
LINC00563-201ENST00000566370 ARHGEF28Q8N1W1 1705 aaKnown RBP17.74■□□□□ 0.43
LINC00563-201ENST00000566370 USP32Q8NFA0 1604 aa17.74■□□□□ 0.43
LINC00563-201ENST00000566370 STAG3Q9UJ98 1225 aa17.73■□□□□ 0.43
LINC00563-201ENST00000566370 IDI1Q13907 227 aa17.72■□□□□ 0.43
LINC00563-201ENST00000566370 NGEFQ8N5V2 710 aa17.72■□□□□ 0.43
LINC00563-201ENST00000566370 NINLQ9Y2I6 1382 aa17.72■□□□□ 0.43
LINC00563-201ENST00000566370 ARHGEF40Q8TER5 1519 aa17.71■□□□□ 0.43
LINC00563-201ENST00000566370 ESF1Q9H501 851 aaKnown RBP17.71■□□□□ 0.43
LINC00563-201ENST00000566370 CLTCQ00610 1675 aaKnown RBP17.7■□□□□ 0.42
LINC00563-201ENST00000566370 RCAN3Q9UKA8 241 aa17.7■□□□□ 0.42
LINC00563-201ENST00000566370 NSD2O96028 1365 aa17.7■□□□□ 0.42
LINC00563-201ENST00000566370 MYO5BQ9ULV0 1848 aa17.69■□□□□ 0.42
LINC00563-201ENST00000566370 TMEM132EQ6IEE7 984 aa17.67■□□□□ 0.42
LINC00563-201ENST00000566370 NSD3Q9BZ95 1437 aa17.67■□□□□ 0.42
LINC00563-201ENST00000566370 CGNL1Q0VF96 1302 aa17.67■□□□□ 0.42
LINC00563-201ENST00000566370 SPATA31D1Q6ZQQ2 1576 aa17.67■□□□□ 0.42
LINC00563-201ENST00000566370 RRP1P56182 461 aaKnown RBP17.66■□□□□ 0.42
LINC00563-201ENST00000566370 MORC1Q86VD1 984 aa17.66■□□□□ 0.42
LINC00563-201ENST00000566370 CCDC136Q96JN2 1154 aa17.66■□□□□ 0.42
LINC00563-201ENST00000566370 ADAMTS8Q9UP79 889 aa17.66■□□□□ 0.42
LINC00563-201ENST00000566370 KIF13AQ9H1H9 1805 aa17.66■□□□□ 0.42
LINC00563-201ENST00000566370 SALL2Q9Y467 1007 aaPredicted RBP17.65■□□□□ 0.42
LINC00563-201ENST00000566370 POLR3AO14802 1390 aaPredicted RBP17.65■□□□□ 0.42
LINC00563-201ENST00000566370 ANKRD36BQ8N2N9 1353 aa17.65■□□□□ 0.42
LINC00563-201ENST00000566370 CFAP53Q96M91 514 aa17.64■□□□□ 0.42
LINC00563-201ENST00000566370 ATAD2Q6PL18 1390 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms