RNA–Protein interactions for RNA: ENST00000566251.1

TUBGCP4-211, Transcript of tubulin gamma complex associated protein 4, human

TSL 3

Gene TUBGCP4, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBGCP4-211	ENST00000566251	HSPA5	P11021	654 aa	Known RBP	13.87	□□□□□ -0.19
TUBGCP4-211	ENST00000566251	FBXO41	Q8TF61	875 aa		13.87	□□□□□ -0.19
TUBGCP4-211	ENST00000566251	CARD11	Q9BXL7	1154 aa		13.87	□□□□□ -0.19
TUBGCP4-211	ENST00000566251	NOS1	P29475	1434 aa		13.87	□□□□□ -0.19
TUBGCP4-211	ENST00000566251	RALGAPB	Q86X10	1494 aa		13.86	□□□□□ -0.19
TUBGCP4-211	ENST00000566251	CLTCL1	P53675	1640 aa		13.86	□□□□□ -0.19
TUBGCP4-211	ENST00000566251	PRAG1	Q86YV5	1406 aa		13.85	□□□□□ -0.19
TUBGCP4-211	ENST00000566251	SPDYE4	A6NLX3	237 aa		13.85	□□□□□ -0.19
TUBGCP4-211	ENST00000566251	PROM2	Q8N271	834 aa		13.85	□□□□□ -0.19
TUBGCP4-211	ENST00000566251	ROCK2	O75116	1388 aa	Known RBP	13.84	□□□□□ -0.19
TUBGCP4-211	ENST00000566251	KIF1B	O60333	1816 aa		13.84	□□□□□ -0.19
TUBGCP4-211	ENST00000566251	HAP1	P54257	671 aa	Predicted RBP	13.83	□□□□□ -0.2
TUBGCP4-211	ENST00000566251	STAG3	Q9UJ98	1225 aa		13.83	□□□□□ -0.2
TUBGCP4-211	ENST00000566251	VGF	O15240	615 aa	Predicted RBP	13.82	□□□□□ -0.2
TUBGCP4-211	ENST00000566251	IDI1	Q13907	227 aa		13.82	□□□□□ -0.2
TUBGCP4-211	ENST00000566251	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.82	□□□□□ -0.2
TUBGCP4-211	ENST00000566251	ZMYM3	Q14202	1370 aa		13.82	□□□□□ -0.2
TUBGCP4-211	ENST00000566251	VASP	P50552	380 aa	Predicted RBP	13.81	□□□□□ -0.2
TUBGCP4-211	ENST00000566251	USP47	Q96K76	1375 aa		13.81	□□□□□ -0.2
TUBGCP4-211	ENST00000566251	HDGF	P51858	240 aa	Known RBP	13.8	□□□□□ -0.2
TUBGCP4-211	ENST00000566251	ERVK-7	P63135	1459 aa		13.8	□□□□□ -0.2
TUBGCP4-211	ENST00000566251	CLTC	Q00610	1675 aa	Known RBP	13.79	□□□□□ -0.2
TUBGCP4-211	ENST00000566251	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.79	□□□□□ -0.2
TUBGCP4-211	ENST00000566251	BCAN	Q96GW7	911 aa		13.79	□□□□□ -0.2
TUBGCP4-211	ENST00000566251	MYOM2	P54296	1465 aa		13.79	□□□□□ -0.2
TUBGCP4-211	ENST00000566251	ADGRB3	O60242	1522 aa		13.79	□□□□□ -0.2
TUBGCP4-211	ENST00000566251	DDX10	Q13206	875 aa	Known RBP	13.78	□□□□□ -0.2
TUBGCP4-211	ENST00000566251	GPRASP1	Q5JY77	1395 aa		13.78	□□□□□ -0.2
TUBGCP4-211	ENST00000566251	UGGT1	Q9NYU2	1555 aa		13.78	□□□□□ -0.2
TUBGCP4-211	ENST00000566251	PREX1	Q8TCU6	1659 aa		13.78	□□□□□ -0.2
TUBGCP4-211	ENST00000566251	CFAP65	Q6ZU64	1925 aa	Known RBP	13.77	□□□□□ -0.21
TUBGCP4-211	ENST00000566251	PIK3C2B	O00750	1634 aa		13.76	□□□□□ -0.21
TUBGCP4-211	ENST00000566251	SYNM	O15061	1565 aa		13.76	□□□□□ -0.21
TUBGCP4-211	ENST00000566251	TRPM1	Q7Z4N2	1603 aa		13.75	□□□□□ -0.21
TUBGCP4-211	ENST00000566251	NBPF1	Q3BBV0	1214 aa		13.75	□□□□□ -0.21
TUBGCP4-211	ENST00000566251	SPATA31D1	Q6ZQQ2	1576 aa		13.75	□□□□□ -0.21
TUBGCP4-211	ENST00000566251	EIF3A	Q14152	1382 aa	Known RBP	13.74	□□□□□ -0.21
TUBGCP4-211	ENST00000566251	TNR	Q92752	1358 aa		13.74	□□□□□ -0.21
TUBGCP4-211	ENST00000566251	SIGLEC1	Q9BZZ2	1709 aa		13.74	□□□□□ -0.21
TUBGCP4-211	ENST00000566251	ST20-MTHFS	A0A0A6YYL1	179 aa		13.74	□□□□□ -0.21
TUBGCP4-211	ENST00000566251	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
TUBGCP4-211	ENST00000566251	LAMC1	P11047	1609 aa		13.74	□□□□□ -0.21
TUBGCP4-211	ENST00000566251	ZFYVE9	O95405	1425 aa		13.73	□□□□□ -0.21
TUBGCP4-211	ENST00000566251	ADGRF5	Q8IZF2	1346 aa		13.73	□□□□□ -0.21
TUBGCP4-211	ENST00000566251	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.73	□□□□□ -0.21
TUBGCP4-211	ENST00000566251	MROH2A	A6NES4	1674 aa		13.72	□□□□□ -0.21
TUBGCP4-211	ENST00000566251	MADD	Q8WXG6	1647 aa		13.72	□□□□□ -0.21
TUBGCP4-211	ENST00000566251	MKRN4P	Q13434	485 aa	Predicted RBP	13.72	□□□□□ -0.21
TUBGCP4-211	ENST00000566251	VSIG10	Q8N0Z9	540 aa		13.72	□□□□□ -0.21
TUBGCP4-211	ENST00000566251	C14orf93	Q9H972	538 aa	Known RBP	13.72	□□□□□ -0.21
TUBGCP4-211	ENST00000566251	KIAA1210	Q9ULL0	1709 aa		13.72	□□□□□ -0.21
TUBGCP4-211	ENST00000566251	PTPRM	P28827	1452 aa		13.72	□□□□□ -0.21
TUBGCP4-211	ENST00000566251	CCDC7	Q96M83	1385 aa		13.71	□□□□□ -0.21
TUBGCP4-211	ENST00000566251	WASHC2A	Q641Q2	1341 aa		13.71	□□□□□ -0.21
TUBGCP4-211	ENST00000566251	CDCA8	Q53HL2	280 aa		13.71	□□□□□ -0.21
TUBGCP4-211	ENST00000566251	CFAP70	Q5T0N1	1121 aa		13.71	□□□□□ -0.21
TUBGCP4-211	ENST00000566251	NRXN1	Q9ULB1	1477 aa		13.71	□□□□□ -0.21
TUBGCP4-211	ENST00000566251	ADAMTSL3	P82987	1691 aa		13.7	□□□□□ -0.22
TUBGCP4-211	ENST00000566251	ANP32C	O43423	234 aa		13.7	□□□□□ -0.22
TUBGCP4-211	ENST00000566251	TMF1	P82094	1093 aa		13.7	□□□□□ -0.22
TUBGCP4-211	ENST00000566251	SCAF11	Q99590	1463 aa	Known RBP	13.69	□□□□□ -0.22
TUBGCP4-211	ENST00000566251	MIER1	Q8N108	512 aa		13.69	□□□□□ -0.22
TUBGCP4-211	ENST00000566251	TMEM131L	A2VDJ0	1609 aa		13.68	□□□□□ -0.22
TUBGCP4-211	ENST00000566251	IFT172	Q9UG01	1749 aa		13.68	□□□□□ -0.22
TUBGCP4-211	ENST00000566251	PRKCSH	P14314	528 aa	Predicted RBP	13.68	□□□□□ -0.22
TUBGCP4-211	ENST00000566251	PPL	O60437	1756 aa		13.68	□□□□□ -0.22
TUBGCP4-211	ENST00000566251	NLRP1	Q9C000	1473 aa		13.67	□□□□□ -0.22
TUBGCP4-211	ENST00000566251	KIF7	Q2M1P5	1343 aa		13.67	□□□□□ -0.22
TUBGCP4-211	ENST00000566251	PIK3C2G	O75747	1445 aa		13.67	□□□□□ -0.22
TUBGCP4-211	ENST00000566251	POLR3GL	Q9BT43	218 aa		13.67	□□□□□ -0.22
TUBGCP4-211	ENST00000566251	NEXMIF	Q5QGS0	1516 aa		13.66	□□□□□ -0.22
TUBGCP4-211	ENST00000566251	C11orf95	C9JLR9	678 aa	Predicted RBP	13.66	□□□□□ -0.22
TUBGCP4-211	ENST00000566251	TAOK2	Q9UL54	1235 aa		13.66	□□□□□ -0.22
TUBGCP4-211	ENST00000566251	A2ML1	A8K2U0	1454 aa		13.66	□□□□□ -0.22
TUBGCP4-211	ENST00000566251	SETBP1	Q9Y6X0	1596 aa		13.66	□□□□□ -0.22
TUBGCP4-211	ENST00000566251	RIMS2	Q9UQ26	1411 aa		13.65	□□□□□ -0.22
TUBGCP4-211	ENST00000566251	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.65	□□□□□ -0.22
TUBGCP4-211	ENST00000566251	EID1	Q9Y6B2	187 aa		13.65	□□□□□ -0.22
TUBGCP4-211	ENST00000566251	FER1L4	A9Z1Z3	1794 aa		13.64	□□□□□ -0.23
TUBGCP4-211	ENST00000566251	CEBPA	P49715	358 aa	Predicted RBP	13.64	□□□□□ -0.23
TUBGCP4-211	ENST00000566251	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.64	□□□□□ -0.23
TUBGCP4-211	ENST00000566251	LMTK3	Q96Q04	1460 aa		13.63	□□□□□ -0.23
TUBGCP4-211	ENST00000566251	KDM5A	P29375	1690 aa	Known RBP	13.63	□□□□□ -0.23
TUBGCP4-211	ENST00000566251	TESK2	Q96S53	571 aa		13.62	□□□□□ -0.23
TUBGCP4-211	ENST00000566251	POLR1A	O95602	1720 aa	Predicted RBP	13.61	□□□□□ -0.23
TUBGCP4-211	ENST00000566251	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.61	□□□□□ -0.23
TUBGCP4-211	ENST00000566251	TMEM2	Q9UHN6	1383 aa		13.6	□□□□□ -0.23
TUBGCP4-211	ENST00000566251	TMEM132E	Q6IEE7	984 aa		13.6	□□□□□ -0.23
TUBGCP4-211	ENST00000566251	TRAK1	Q9UPV9	953 aa		13.6	□□□□□ -0.23
TUBGCP4-211	ENST00000566251	C3	P01024	1663 aa		13.59	□□□□□ -0.23
TUBGCP4-211	ENST00000566251	IQGAP1	P46940	1657 aa		13.59	□□□□□ -0.23
TUBGCP4-211	ENST00000566251	CCER2	I3L3R5	266 aa		13.59	□□□□□ -0.23
TUBGCP4-211	ENST00000566251	HSPA2	P54652	639 aa		13.58	□□□□□ -0.24
TUBGCP4-211	ENST00000566251	TXNDC2	Q86VQ3	553 aa		13.58	□□□□□ -0.24
TUBGCP4-211	ENST00000566251	SBNO2	Q9Y2G9	1366 aa		13.58	□□□□□ -0.24
TUBGCP4-211	ENST00000566251	RIMS1	Q86UR5	1692 aa	Known RBP	13.57	□□□□□ -0.24
TUBGCP4-211	ENST00000566251	MYO5B	Q9ULV0	1848 aa		13.57	□□□□□ -0.24
TUBGCP4-211	ENST00000566251	PUS7	Q96PZ0	661 aa	Known RBP	13.56	□□□□□ -0.24
TUBGCP4-211	ENST00000566251	POGK	Q9P215	609 aa		13.56	□□□□□ -0.24
TUBGCP4-211	ENST00000566251	ADGRB1	O14514	1584 aa		13.55	□□□□□ -0.24

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