RNA–Protein interactions for RNA: ENST00000565975.5

SPNS1-207, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 1,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-207ENST00000565975 MYOM2P54296 1465 aa30.07■■■□□ 2.4
SPNS1-207ENST00000565975 PANK3Q9H999 370 aa30.07■■■□□ 2.4
SPNS1-207ENST00000565975 CDCA8Q53HL2 280 aa30.04■■■□□ 2.4
SPNS1-207ENST00000565975 RBM19Q9Y4C8 960 aaKnown RBP30.04■■■□□ 2.4
SPNS1-207ENST00000565975 EIF3AQ14152 1382 aaKnown RBP30.01■■■□□ 2.4
SPNS1-207ENST00000565975 SYNMO15061 1565 aa30.01■■■□□ 2.4
SPNS1-207ENST00000565975 MAP3K4Q9Y6R4 1608 aa30.01■■■□□ 2.39
SPNS1-207ENST00000565975 POGZQ7Z3K3 1410 aa30.01■■■□□ 2.39
SPNS1-207ENST00000565975 MLH3Q9UHC1 1453 aa30.01■■■□□ 2.39
SPNS1-207ENST00000565975 PPRC1Q5VV67 1664 aaKnown RBP30.01■■■□□ 2.39
SPNS1-207ENST00000565975 CD109Q6YHK3 1445 aa30■■■□□ 2.39
SPNS1-207ENST00000565975 KIF1BO60333 1816 aa30■■■□□ 2.39
SPNS1-207ENST00000565975 IFT172Q9UG01 1749 aa29.97■■■□□ 2.39
SPNS1-207ENST00000565975 SLC24A1O60721 1099 aa29.95■■■□□ 2.39
SPNS1-207ENST00000565975 PDE3BQ13370 1112 aa29.95■■■□□ 2.39
SPNS1-207ENST00000565975 CC2D1BQ5T0F9 858 aaKnown RBP29.95■■■□□ 2.39
SPNS1-207ENST00000565975 BLMP54132 1417 aaPredicted RBP29.94■■■□□ 2.38
SPNS1-207ENST00000565975 UGGT1Q9NYU2 1555 aa29.94■■■□□ 2.38
SPNS1-207ENST00000565975 HECW2Q9P2P5 1572 aa29.94■■■□□ 2.38
SPNS1-207ENST00000565975 ABCA6Q8N139 1617 aa29.94■■■□□ 2.38
SPNS1-207ENST00000565975 NRXN1Q9ULB1 1477 aa29.93■■■□□ 2.38
SPNS1-207ENST00000565975 GLI2P10070 1586 aa29.93■■■□□ 2.38
SPNS1-207ENST00000565975 FRMPD1Q5SYB0 1578 aa29.92■■■□□ 2.38
SPNS1-207ENST00000565975 TSPOAP1O95153 1857 aa29.92■■■□□ 2.38
SPNS1-207ENST00000565975 ADGRB3O60242 1522 aa29.9■■■□□ 2.38
SPNS1-207ENST00000565975 MROH2AA6NES4 1674 aa29.89■■■□□ 2.37
SPNS1-207ENST00000565975 B4GALNT3Q6L9W6 998 aa29.88■■■□□ 2.37
SPNS1-207ENST00000565975 MYOM1P52179 1685 aa29.88■■■□□ 2.37
SPNS1-207ENST00000565975 NEO1Q92859 1461 aa29.88■■■□□ 2.37
SPNS1-207ENST00000565975 NPC1L1Q9UHC9 1359 aa29.88■■■□□ 2.37
SPNS1-207ENST00000565975 KNSTRNQ9Y448 316 aa29.88■■■□□ 2.37
SPNS1-207ENST00000565975 KDM5AP29375 1690 aaKnown RBP29.87■■■□□ 2.37
SPNS1-207ENST00000565975 ASXL1Q8IXJ9 1541 aa29.85■■■□□ 2.37
SPNS1-207ENST00000565975 ADGRF5Q8IZF2 1346 aa29.84■■■□□ 2.37
SPNS1-207ENST00000565975 MYO3AQ8NEV4 1616 aa29.84■■■□□ 2.37
SPNS1-207ENST00000565975 AMER1Q5JTC6 1135 aaPredicted RBP29.84■■■□□ 2.37
SPNS1-207ENST00000565975 SETBP1Q9Y6X0 1596 aa29.83■■■□□ 2.37
SPNS1-207ENST00000565975 CFAP70Q5T0N1 1121 aa29.83■■■□□ 2.37
SPNS1-207ENST00000565975 NPATQ14207 1427 aa29.82■■■□□ 2.36
SPNS1-207ENST00000565975 SBNO2Q9Y2G9 1366 aa29.8■■■□□ 2.36
SPNS1-207ENST00000565975 SENP3-EIF4A1A0A087X0R7 540 aa29.79■■■□□ 2.36
SPNS1-207ENST00000565975 ABCC3O15438 1527 aa29.79■■■□□ 2.36
SPNS1-207ENST00000565975 ERVK-7P63135 1459 aa29.78■■■□□ 2.36
SPNS1-207ENST00000565975 PPP2R1AP30153 589 aa29.78■■■□□ 2.36
SPNS1-207ENST00000565975 PIK3C2GO75747 1445 aa29.78■■■□□ 2.36
SPNS1-207ENST00000565975 NOS1P29475 1434 aa29.76■■■□□ 2.35
SPNS1-207ENST00000565975 RRP1P56182 461 aaKnown RBP29.75■■■□□ 2.35
SPNS1-207ENST00000565975 RCAN3Q9UKA8 241 aa29.75■■■□□ 2.35
SPNS1-207ENST00000565975 PPLO60437 1756 aa29.74■■■□□ 2.35
SPNS1-207ENST00000565975 RPGRIP1LQ68CZ1 1315 aa29.74■■■□□ 2.35
SPNS1-207ENST00000565975 FANCIQ9NVI1 1328 aa29.74■■■□□ 2.35
SPNS1-207ENST00000565975 CAMSAP1Q5T5Y3 1602 aa29.72■■■□□ 2.35
SPNS1-207ENST00000565975 CCDC136Q96JN2 1154 aa29.71■■■□□ 2.35
SPNS1-207ENST00000565975 GGT6Q6P531 493 aa29.7■■■□□ 2.35
SPNS1-207ENST00000565975 DIP2CQ9Y2E4 1556 aa29.7■■■□□ 2.34
SPNS1-207ENST00000565975 ANP32EQ9BTT0 268 aa29.68■■■□□ 2.34
SPNS1-207ENST00000565975 SALL2Q9Y467 1007 aaPredicted RBP29.68■■■□□ 2.34
SPNS1-207ENST00000565975 C14orf93Q9H972 538 aaKnown RBP29.66■■■□□ 2.34
SPNS1-207ENST00000565975 ADAMTS8Q9UP79 889 aa29.66■■■□□ 2.34
SPNS1-207ENST00000565975 PIK3C2BO00750 1634 aa29.66■■■□□ 2.34
SPNS1-207ENST00000565975 WDR43Q15061 677 aaKnown RBP eCLIP29.65■■■□□ 2.34
SPNS1-207ENST00000565975 ADGRB1O14514 1584 aa29.65■■■□□ 2.34
SPNS1-207ENST00000565975 ZC3H13Q5T200 1668 aaKnown RBP29.65■■■□□ 2.34
SPNS1-207ENST00000565975 RICTORQ6R327 1708 aa29.65■■■□□ 2.34
SPNS1-207ENST00000565975 CENPJQ9HC77 1338 aaPredicted RBP29.64■■■□□ 2.34
SPNS1-207ENST00000565975 ARHGAP31Q2M1Z3 1444 aa29.64■■■□□ 2.34
SPNS1-207ENST00000565975 CHGAP10645 457 aaKnown RBP29.64■■■□□ 2.34
SPNS1-207ENST00000565975 CDCA7LQ96GN5 454 aa29.63■■■□□ 2.33
SPNS1-207ENST00000565975 RAPGEF3O95398 923 aa29.61■■■□□ 2.33
SPNS1-207ENST00000565975 SIGLEC1Q9BZZ2 1709 aa29.6■■■□□ 2.33
SPNS1-207ENST00000565975 QRICH2Q9H0J4 1663 aa29.57■■■□□ 2.32
SPNS1-207ENST00000565975 CARD14Q9BXL6 1004 aa29.55■■■□□ 2.32
SPNS1-207ENST00000565975 CFAP65Q6ZU64 1925 aaKnown RBP29.54■■■□□ 2.32
SPNS1-207ENST00000565975 NEXMIFQ5QGS0 1516 aa29.54■■■□□ 2.32
SPNS1-207ENST00000565975 ZNF521Q96K83 1311 aa29.54■■■□□ 2.32
SPNS1-207ENST00000565975 EXOC6Q8TAG9 804 aa29.53■■■□□ 2.32
SPNS1-207ENST00000565975 PLEKHH1Q9ULM0 1364 aa29.52■■■□□ 2.32
SPNS1-207ENST00000565975 VGFO15240 615 aaPredicted RBP29.5■■■□□ 2.31
SPNS1-207ENST00000565975 PUS7Q96PZ0 661 aaKnown RBP29.5■■■□□ 2.31
SPNS1-207ENST00000565975 TRAK1Q9UPV9 953 aa29.5■■■□□ 2.31
SPNS1-207ENST00000565975 ZFYVE9O95405 1425 aa29.49■■■□□ 2.31
SPNS1-207ENST00000565975 MSH5O43196 834 aa29.47■■■□□ 2.31
SPNS1-207ENST00000565975 YEATS2Q9ULM3 1422 aa29.47■■■□□ 2.31
SPNS1-207ENST00000565975 USP32Q8NFA0 1604 aa29.47■■■□□ 2.31
SPNS1-207ENST00000565975 SLC52A1Q9NWF4 448 aa29.46■■■□□ 2.31
SPNS1-207ENST00000565975 POLR3AO14802 1390 aaPredicted RBP29.45■■■□□ 2.31
SPNS1-207ENST00000565975 NGEFQ8N5V2 710 aa29.45■■■□□ 2.31
SPNS1-207ENST00000565975 GOLGA2Q08379 1002 aa29.44■■■□□ 2.3
SPNS1-207ENST00000565975 DUSP27Q5VZP5 1158 aa29.44■■■□□ 2.3
SPNS1-207ENST00000565975 NSD3Q9BZ95 1437 aa29.44■■■□□ 2.3
SPNS1-207ENST00000565975 ARHGEF28Q8N1W1 1705 aaKnown RBP29.43■■■□□ 2.3
SPNS1-207ENST00000565975 TMEM132EQ6IEE7 984 aa29.43■■■□□ 2.3
SPNS1-207ENST00000565975 PREX1Q8TCU6 1659 aa29.4■■■□□ 2.3
SPNS1-207ENST00000565975 IDI1Q13907 227 aa29.39■■■□□ 2.29
SPNS1-207ENST00000565975 SLFN5Q08AF3 891 aa29.38■■■□□ 2.29
SPNS1-207ENST00000565975 TRMT2AQ8IZ69 625 aaKnown RBP29.38■■■□□ 2.29
SPNS1-207ENST00000565975 EVC2Q86UK5 1308 aa29.37■■■□□ 2.29
SPNS1-207ENST00000565975 AEBP2Q6ZN18 517 aaPredicted RBP29.37■■■□□ 2.29
SPNS1-207ENST00000565975 TULP4Q9NRJ4 1543 aa29.36■■■□□ 2.29
SPNS1-207ENST00000565975 TMEM131LA2VDJ0 1609 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms