RNA–Protein interactions for RNA: ENST00000565891.1

SPG7-212, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-212ENST00000565891 PROSER2Q86WR7 435 aaPredicted RBP22.72■■□□□ 1.23
SPG7-212ENST00000565891 SENP3Q9H4L4 574 aaPredicted RBP22.72■■□□□ 1.23
SPG7-212ENST00000565891 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.7■■□□□ 1.22
SPG7-212ENST00000565891 TMEM94Q12767 1356 aa22.7■■□□□ 1.22
SPG7-212ENST00000565891 RIMS2Q9UQ26 1411 aa22.69■■□□□ 1.22
SPG7-212ENST00000565891 GCC2Q8IWJ2 1684 aa22.68■■□□□ 1.22
SPG7-212ENST00000565891 ZFYVE9O95405 1425 aa22.67■■□□□ 1.22
SPG7-212ENST00000565891 PLEKHG1Q9ULL1 1385 aa22.67■■□□□ 1.22
SPG7-212ENST00000565891 RBM33Q96EV2 1170 aaKnown RBP22.65■■□□□ 1.22
SPG7-212ENST00000565891 IQGAP3Q86VI3 1631 aa22.64■■□□□ 1.22
SPG7-212ENST00000565891 TBX22Q9Y458 520 aa22.64■■□□□ 1.21
SPG7-212ENST00000565891 TMEM131LA2VDJ0 1609 aa22.64■■□□□ 1.21
SPG7-212ENST00000565891 MED1Q15648 1581 aaPredicted RBP22.63■■□□□ 1.21
SPG7-212ENST00000565891 E9PCH4 1651 aa22.63■■□□□ 1.21
SPG7-212ENST00000565891 XIRP1Q702N8 1843 aaKnown RBP22.63■■□□□ 1.21
SPG7-212ENST00000565891 PHF23Q9BUL5 403 aaPredicted RBP22.62■■□□□ 1.21
SPG7-212ENST00000565891 FAM135BQ49AJ0 1406 aa22.62■■□□□ 1.21
SPG7-212ENST00000565891 NKTRP30414 1462 aaKnown RBP22.61■■□□□ 1.21
SPG7-212ENST00000565891 NUTM2DQ5VT03 806 aaPredicted RBP22.61■■□□□ 1.21
SPG7-212ENST00000565891 MYO5BQ9ULV0 1848 aa22.59■■□□□ 1.21
SPG7-212ENST00000565891 MSH6P52701 1360 aa22.58■■□□□ 1.21
SPG7-212ENST00000565891 NWD1Q149M9 1564 aa22.58■■□□□ 1.2
SPG7-212ENST00000565891 RRBP1Q9P2E9 1410 aaKnown RBP22.57■■□□□ 1.2
SPG7-212ENST00000565891 SLAIN2Q9P270 581 aa22.54■■□□□ 1.2
SPG7-212ENST00000565891 ADAMTS13Q76LX8 1427 aa22.53■■□□□ 1.2
SPG7-212ENST00000565891 PIK3R4Q99570 1358 aa22.52■■□□□ 1.2
SPG7-212ENST00000565891 ZNF326Q5BKZ1 582 aaKnown RBP22.52■■□□□ 1.2
SPG7-212ENST00000565891 C14orf37Q86TY3 774 aa22.52■■□□□ 1.2
SPG7-212ENST00000565891 CHD2O14647 1828 aaKnown RBP22.51■■□□□ 1.19
SPG7-212ENST00000565891 NCOA3Q9Y6Q9 1424 aa22.5■■□□□ 1.19
SPG7-212ENST00000565891 NAIPQ13075 1403 aa22.49■■□□□ 1.19
SPG7-212ENST00000565891 AMOTL2Q9Y2J4 779 aa22.48■■□□□ 1.19
SPG7-212ENST00000565891 DIP2AQ14689 1571 aa22.47■■□□□ 1.19
SPG7-212ENST00000565891 TRIM52Q96A61 297 aa22.47■■□□□ 1.19
SPG7-212ENST00000565891 C19orf44Q9H6X5 657 aa22.46■■□□□ 1.19
SPG7-212ENST00000565891 ROBO1Q9Y6N7 1651 aa22.46■■□□□ 1.19
SPG7-212ENST00000565891 CADPS2Q86UW7 1296 aa22.45■■□□□ 1.18
SPG7-212ENST00000565891 ATF3P18847 181 aa22.44■■□□□ 1.18
SPG7-212ENST00000565891 SPHKAPQ2M3C7 1700 aa22.43■■□□□ 1.18
SPG7-212ENST00000565891 TRPM2O94759 1503 aa22.43■■□□□ 1.18
SPG7-212ENST00000565891 HFM1A2PYH4 1435 aa22.4■■□□□ 1.18
SPG7-212ENST00000565891 PTPRUQ92729 1446 aa22.4■■□□□ 1.18
SPG7-212ENST00000565891 SLC4A1APQ9BWU0 796 aaKnown RBP22.4■■□□□ 1.18
SPG7-212ENST00000565891 RGS17Q9UGC6 210 aaPredicted RBP22.4■■□□□ 1.18
SPG7-212ENST00000565891 SETBP1Q9Y6X0 1596 aa22.37■■□□□ 1.17
SPG7-212ENST00000565891 JCADQ9P266 1359 aa22.37■■□□□ 1.17
SPG7-212ENST00000565891 METP08581 1390 aa22.35■■□□□ 1.17
SPG7-212ENST00000565891 CLTCL1P53675 1640 aa22.35■■□□□ 1.17
SPG7-212ENST00000565891 VGFO15240 615 aaPredicted RBP22.34■■□□□ 1.17
SPG7-212ENST00000565891 NRXN3Q9Y4C0 1643 aa22.33■■□□□ 1.17
SPG7-212ENST00000565891 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.33■■□□□ 1.17
SPG7-212ENST00000565891 PHLPP1O60346 1717 aa22.32■■□□□ 1.16
SPG7-212ENST00000565891 RPGRIP1LQ68CZ1 1315 aa22.31■■□□□ 1.16
SPG7-212ENST00000565891 NEXMIFQ5QGS0 1516 aa22.31■■□□□ 1.16
SPG7-212ENST00000565891 DCCP43146 1447 aa22.3■■□□□ 1.16
SPG7-212ENST00000565891 POTEAQ6S8J7 498 aa22.29■■□□□ 1.16
SPG7-212ENST00000565891 BRINP3Q76B58 766 aa22.29■■□□□ 1.16
SPG7-212ENST00000565891 KIF1BO60333 1816 aa22.29■■□□□ 1.16
SPG7-212ENST00000565891 XRN1Q8IZH2 1706 aaKnown RBP22.28■■□□□ 1.16
SPG7-212ENST00000565891 SPATA31A6Q5VVP1 1343 aa22.27■■□□□ 1.16
SPG7-212ENST00000565891 COL16A1Q07092 1604 aaPredicted RBP22.25■■□□□ 1.15
SPG7-212ENST00000565891 FOXD1Q16676 465 aa22.25■■□□□ 1.15
SPG7-212ENST00000565891 AHDC1Q5TGY3 1603 aaPredicted RBP22.24■■□□□ 1.15
SPG7-212ENST00000565891 MPHOSPH9Q99550 1183 aa22.23■■□□□ 1.15
SPG7-212ENST00000565891 ADGRL3Q9HAR2 1447 aa22.23■■□□□ 1.15
SPG7-212ENST00000565891 MEX3CQ5U5Q3 659 aaKnown RBP22.22■■□□□ 1.15
SPG7-212ENST00000565891 MST1RQ04912 1400 aa22.22■■□□□ 1.15
SPG7-212ENST00000565891 ASXL1Q8IXJ9 1541 aa22.18■■□□□ 1.14
SPG7-212ENST00000565891 CCDC144AA2RUR9 1427 aa22.18■■□□□ 1.14
SPG7-212ENST00000565891 ACIN1Q9UKV3 1341 aaKnown RBP22.18■■□□□ 1.14
SPG7-212ENST00000565891 LRRC59Q96AG4 307 aaKnown RBP22.18■■□□□ 1.14
SPG7-212ENST00000565891 PTCH1Q13635 1447 aa22.17■■□□□ 1.14
SPG7-212ENST00000565891 ROBO2Q9HCK4 1378 aa22.17■■□□□ 1.14
SPG7-212ENST00000565891 RGL3Q3MIN7 710 aa22.17■■□□□ 1.14
SPG7-212ENST00000565891 ZNF772Q68DY9 489 aaPredicted RBP22.16■■□□□ 1.14
SPG7-212ENST00000565891 NUTM2BA6NNL0 878 aaPredicted RBP22.15■■□□□ 1.14
SPG7-212ENST00000565891 NUTM2EB1AL46 878 aaPredicted RBP22.15■■□□□ 1.14
SPG7-212ENST00000565891 NUTM2AQ8IVF1 878 aaPredicted RBP22.15■■□□□ 1.14
SPG7-212ENST00000565891 LRP6O75581 1613 aa22.15■■□□□ 1.14
SPG7-212ENST00000565891 SETD5Q9C0A6 1442 aa22.14■■□□□ 1.14
SPG7-212ENST00000565891 ADGRF5Q8IZF2 1346 aa22.13■■□□□ 1.13
SPG7-212ENST00000565891 SHPRHQ149N8 1683 aa22.12■■□□□ 1.13
SPG7-212ENST00000565891 DDX17Q92841 729 aaKnown RBP22.12■■□□□ 1.13
SPG7-212ENST00000565891 PRAG1Q86YV5 1406 aa22.12■■□□□ 1.13
SPG7-212ENST00000565891 ANKRD30BQ9BXX2 1392 aa22.12■■□□□ 1.13
SPG7-212ENST00000565891 C1orf167Q5SNV9 1468 aa22.11■■□□□ 1.13
SPG7-212ENST00000565891 PPLO60437 1756 aa22.11■■□□□ 1.13
SPG7-212ENST00000565891 SETD1AO15047 1707 aaKnown RBP22.1■■□□□ 1.13
SPG7-212ENST00000565891 SPATA31E1Q6ZUB1 1445 aa22.1■■□□□ 1.13
SPG7-212ENST00000565891 NALCNQ8IZF0 1738 aa22.1■■□□□ 1.13
SPG7-212ENST00000565891 ORAI2Q96SN7 254 aa22.09■■□□□ 1.13
SPG7-212ENST00000565891 STK26Q9P289 416 aa22.08■■□□□ 1.13
SPG7-212ENST00000565891 NHSL1Q5SYE7 1610 aa22.07■■□□□ 1.12
SPG7-212ENST00000565891 PNPLA6Q8IY17 1366 aa22.05■■□□□ 1.12
SPG7-212ENST00000565891 RXRBP28702 533 aa22.04■■□□□ 1.12
SPG7-212ENST00000565891 SOS2Q07890 1332 aaPredicted RBP22.04■■□□□ 1.12
SPG7-212ENST00000565891 LRPPRCP42704 1394 aaKnown RBP22.03■■□□□ 1.12
SPG7-212ENST00000565891 TMEM132EQ6IEE7 984 aa22.03■■□□□ 1.12
SPG7-212ENST00000565891 WAPLQ7Z5K2 1190 aa22.03■■□□□ 1.12
SPG7-212ENST00000565891 AFF2P51816 1311 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms