RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 RBM33Q96EV2 1170 aaKnown RBP28.91■■■□□ 2.22
SPSB3-207ENST00000565550 CHGAP10645 457 aaKnown RBP28.9■■■□□ 2.22
SPSB3-207ENST00000565550 HDGFP51858 240 aaKnown RBP28.9■■■□□ 2.22
SPSB3-207ENST00000565550 XIRP1Q702N8 1843 aaKnown RBP28.9■■■□□ 2.22
SPSB3-207ENST00000565550 ZFYVE9O95405 1425 aa28.88■■■□□ 2.21
SPSB3-207ENST00000565550 RIMS2Q9UQ26 1411 aa28.88■■■□□ 2.21
SPSB3-207ENST00000565550 PPP1R15AO75807 674 aaPredicted RBP28.88■■■□□ 2.21
SPSB3-207ENST00000565550 NUP155O75694 1391 aa28.88■■■□□ 2.21
SPSB3-207ENST00000565550 GCC2Q8IWJ2 1684 aa28.86■■■□□ 2.21
SPSB3-207ENST00000565550 PLEKHG1Q9ULL1 1385 aa28.86■■■□□ 2.21
SPSB3-207ENST00000565550 TMEM131LA2VDJ0 1609 aa28.84■■■□□ 2.21
SPSB3-207ENST00000565550 PHF23Q9BUL5 403 aaPredicted RBP28.83■■■□□ 2.21
SPSB3-207ENST00000565550 NUTM2DQ5VT03 806 aaPredicted RBP28.82■■■□□ 2.2
SPSB3-207ENST00000565550 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.82■■■□□ 2.2
SPSB3-207ENST00000565550 FAM135BQ49AJ0 1406 aa28.82■■■□□ 2.2
SPSB3-207ENST00000565550 E9PCH4 1651 aa28.82■■■□□ 2.2
SPSB3-207ENST00000565550 MYO5BQ9ULV0 1848 aa28.8■■■□□ 2.2
SPSB3-207ENST00000565550 IQGAP3Q86VI3 1631 aa28.8■■■□□ 2.2
SPSB3-207ENST00000565550 NKTRP30414 1462 aaKnown RBP28.79■■■□□ 2.2
SPSB3-207ENST00000565550 TBX22Q9Y458 520 aa28.79■■■□□ 2.2
SPSB3-207ENST00000565550 NWD1Q149M9 1564 aa28.79■■■□□ 2.2
SPSB3-207ENST00000565550 MSH6P52701 1360 aa28.74■■■□□ 2.19
SPSB3-207ENST00000565550 ADAMTS13Q76LX8 1427 aa28.7■■■□□ 2.19
SPSB3-207ENST00000565550 SLAIN2Q9P270 581 aa28.7■■■□□ 2.18
SPSB3-207ENST00000565550 CHD2O14647 1828 aaKnown RBP28.69■■■□□ 2.18
SPSB3-207ENST00000565550 ROBO1Q9Y6N7 1651 aa28.66■■■□□ 2.18
SPSB3-207ENST00000565550 RRBP1Q9P2E9 1410 aaKnown RBP28.66■■■□□ 2.18
SPSB3-207ENST00000565550 C14orf37Q86TY3 774 aa28.64■■■□□ 2.18
SPSB3-207ENST00000565550 PIK3R4Q99570 1358 aa28.63■■■□□ 2.17
SPSB3-207ENST00000565550 RGS17Q9UGC6 210 aaPredicted RBP28.63■■■□□ 2.17
SPSB3-207ENST00000565550 NCOA3Q9Y6Q9 1424 aa28.62■■■□□ 2.17
SPSB3-207ENST00000565550 ZNF326Q5BKZ1 582 aaKnown RBP28.61■■■□□ 2.17
SPSB3-207ENST00000565550 AMOTL2Q9Y2J4 779 aa28.61■■■□□ 2.17
SPSB3-207ENST00000565550 DIP2AQ14689 1571 aa28.6■■■□□ 2.17
SPSB3-207ENST00000565550 NAIPQ13075 1403 aa28.59■■■□□ 2.17
SPSB3-207ENST00000565550 C19orf44Q9H6X5 657 aa28.58■■■□□ 2.17
SPSB3-207ENST00000565550 PTPRUQ92729 1446 aa28.57■■■□□ 2.16
SPSB3-207ENST00000565550 SPHKAPQ2M3C7 1700 aa28.56■■■□□ 2.16
SPSB3-207ENST00000565550 TRPM2O94759 1503 aa28.55■■■□□ 2.16
SPSB3-207ENST00000565550 CADPS2Q86UW7 1296 aa28.55■■■□□ 2.16
SPSB3-207ENST00000565550 ATF3P18847 181 aa28.54■■■□□ 2.16
SPSB3-207ENST00000565550 TRIM52Q96A61 297 aa28.52■■■□□ 2.16
SPSB3-207ENST00000565550 JCADQ9P266 1359 aa28.49■■■□□ 2.15
SPSB3-207ENST00000565550 SETBP1Q9Y6X0 1596 aa28.48■■■□□ 2.15
SPSB3-207ENST00000565550 PHLPP1O60346 1717 aa28.48■■■□□ 2.15
SPSB3-207ENST00000565550 METP08581 1390 aa28.48■■■□□ 2.15
SPSB3-207ENST00000565550 NRXN3Q9Y4C0 1643 aa28.47■■■□□ 2.15
SPSB3-207ENST00000565550 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.47■■■□□ 2.15
SPSB3-207ENST00000565550 CLTCL1P53675 1640 aa28.47■■■□□ 2.15
SPSB3-207ENST00000565550 POTEAQ6S8J7 498 aa28.46■■■□□ 2.15
SPSB3-207ENST00000565550 HFM1A2PYH4 1435 aa28.45■■■□□ 2.15
SPSB3-207ENST00000565550 SLC4A1APQ9BWU0 796 aaKnown RBP28.43■■■□□ 2.14
SPSB3-207ENST00000565550 NEXMIFQ5QGS0 1516 aa28.42■■■□□ 2.14
SPSB3-207ENST00000565550 BRINP3Q76B58 766 aa28.41■■■□□ 2.14
SPSB3-207ENST00000565550 COL16A1Q07092 1604 aaPredicted RBP28.4■■■□□ 2.14
SPSB3-207ENST00000565550 XRN1Q8IZH2 1706 aaKnown RBP28.39■■■□□ 2.14
SPSB3-207ENST00000565550 DCCP43146 1447 aa28.37■■■□□ 2.13
SPSB3-207ENST00000565550 VGFO15240 615 aaPredicted RBP28.37■■■□□ 2.13
SPSB3-207ENST00000565550 KIF1BO60333 1816 aa28.35■■■□□ 2.13
SPSB3-207ENST00000565550 SPATA31A6Q5VVP1 1343 aa28.35■■■□□ 2.13
SPSB3-207ENST00000565550 AHDC1Q5TGY3 1603 aaPredicted RBP28.35■■■□□ 2.13
SPSB3-207ENST00000565550 FOXD1Q16676 465 aa28.32■■■□□ 2.12
SPSB3-207ENST00000565550 RPGRIP1LQ68CZ1 1315 aa28.32■■■□□ 2.12
SPSB3-207ENST00000565550 MST1RQ04912 1400 aa28.32■■■□□ 2.12
SPSB3-207ENST00000565550 MEX3CQ5U5Q3 659 aaKnown RBP28.3■■■□□ 2.12
SPSB3-207ENST00000565550 LRP6O75581 1613 aa28.29■■■□□ 2.12
SPSB3-207ENST00000565550 ADGRL3Q9HAR2 1447 aa28.29■■■□□ 2.12
SPSB3-207ENST00000565550 ASXL1Q8IXJ9 1541 aa28.27■■■□□ 2.12
SPSB3-207ENST00000565550 NUTM2BA6NNL0 878 aaPredicted RBP28.24■■■□□ 2.11
SPSB3-207ENST00000565550 NUTM2EB1AL46 878 aaPredicted RBP28.24■■■□□ 2.11
SPSB3-207ENST00000565550 NUTM2AQ8IVF1 878 aaPredicted RBP28.24■■■□□ 2.11
SPSB3-207ENST00000565550 ROBO2Q9HCK4 1378 aa28.24■■■□□ 2.11
SPSB3-207ENST00000565550 DDX17Q92841 729 aaKnown RBP28.23■■■□□ 2.11
SPSB3-207ENST00000565550 MPHOSPH9Q99550 1183 aa28.22■■■□□ 2.11
SPSB3-207ENST00000565550 SHPRHQ149N8 1683 aa28.22■■■□□ 2.11
SPSB3-207ENST00000565550 PTCH1Q13635 1447 aa28.21■■■□□ 2.11
SPSB3-207ENST00000565550 SETD5Q9C0A6 1442 aa28.21■■■□□ 2.11
SPSB3-207ENST00000565550 ZNF772Q68DY9 489 aaPredicted RBP28.21■■■□□ 2.11
SPSB3-207ENST00000565550 LRRC59Q96AG4 307 aaKnown RBP28.21■■■□□ 2.11
SPSB3-207ENST00000565550 NALCNQ8IZF0 1738 aa28.19■■■□□ 2.1
SPSB3-207ENST00000565550 RGL3Q3MIN7 710 aa28.19■■■□□ 2.1
SPSB3-207ENST00000565550 SETD1AO15047 1707 aaKnown RBP28.18■■■□□ 2.1
SPSB3-207ENST00000565550 CCDC144AA2RUR9 1427 aa28.18■■■□□ 2.1
SPSB3-207ENST00000565550 C1orf167Q5SNV9 1468 aa28.17■■■□□ 2.1
SPSB3-207ENST00000565550 ADGRF5Q8IZF2 1346 aa28.17■■■□□ 2.1
SPSB3-207ENST00000565550 NHSL1Q5SYE7 1610 aa28.15■■■□□ 2.1
SPSB3-207ENST00000565550 PPLO60437 1756 aa28.15■■■□□ 2.1
SPSB3-207ENST00000565550 ORAI2Q96SN7 254 aa28.14■■■□□ 2.1
SPSB3-207ENST00000565550 PRAG1Q86YV5 1406 aa28.14■■■□□ 2.1
SPSB3-207ENST00000565550 SPATA31E1Q6ZUB1 1445 aa28.11■■■□□ 2.09
SPSB3-207ENST00000565550 PNPLA6Q8IY17 1366 aa28.11■■■□□ 2.09
SPSB3-207ENST00000565550 STK26Q9P289 416 aa28.09■■■□□ 2.09
SPSB3-207ENST00000565550 AFF2P51816 1311 aa28.08■■■□□ 2.09
SPSB3-207ENST00000565550 ANKRD30BQ9BXX2 1392 aa28.08■■■□□ 2.09
SPSB3-207ENST00000565550 RXRBP28702 533 aa28.07■■■□□ 2.08
SPSB3-207ENST00000565550 SOS2Q07890 1332 aaPredicted RBP28.06■■■□□ 2.08
SPSB3-207ENST00000565550 C8orf37Q96NL8 207 aa28.05■■■□□ 2.08
SPSB3-207ENST00000565550 TMEM132EQ6IEE7 984 aa28.04■■■□□ 2.08
SPSB3-207ENST00000565550 WAPLQ7Z5K2 1190 aa28.04■■■□□ 2.08
SPSB3-207ENST00000565550 ACIN1Q9UKV3 1341 aaKnown RBP28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms