RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 TMEM132AQ24JP5 1023 aa7.83□□□□□ -1.16
CAPN3-214ENST00000565274 MTRQ99707 1265 aa7.83□□□□□ -1.16
CAPN3-214ENST00000565274 LOC105371045A0A1W2PR82 267 aa7.82□□□□□ -1.16
CAPN3-214ENST00000565274 GFRA3O60609 400 aa7.82□□□□□ -1.16
CAPN3-214ENST00000565274 OSBPP22059 807 aa7.82□□□□□ -1.16
CAPN3-214ENST00000565274 TRIM26Q12899 539 aaPredicted RBP7.82□□□□□ -1.16
CAPN3-214ENST00000565274 PPARGC1BQ86YN6 1023 aaKnown RBP7.82□□□□□ -1.16
CAPN3-214ENST00000565274 ZNF516Q92618 1163 aa7.81□□□□□ -1.16
CAPN3-214ENST00000565274 PRKD2Q9BZL6 878 aa7.81□□□□□ -1.16
CAPN3-214ENST00000565274 IL21Q9HBE4 155 aa7.81□□□□□ -1.16
CAPN3-214ENST00000565274 CECR2Q9BXF3 1484 aa7.81□□□□□ -1.16
CAPN3-214ENST00000565274 MROH2BQ7Z745 1585 aa7.8□□□□□ -1.16
CAPN3-214ENST00000565274 APLP1P51693 650 aa7.79□□□□□ -1.16
CAPN3-214ENST00000565274 PPP1R18Q6NYC8 613 aa7.79□□□□□ -1.16
CAPN3-214ENST00000565274 PADI6Q6TGC4 694 aa7.79□□□□□ -1.16
CAPN3-214ENST00000565274 ARIH1Q9Y4X5 557 aaPredicted RBP7.79□□□□□ -1.16
CAPN3-214ENST00000565274 SWT1Q5T5J6 900 aaKnown RBP7.78□□□□□ -1.16
CAPN3-214ENST00000565274 BAZ1AQ9NRL2 1556 aaPredicted RBP7.78□□□□□ -1.16
CAPN3-214ENST00000565274 COPS2P61201 443 aa7.77□□□□□ -1.17
CAPN3-214ENST00000565274 NKX2-3Q8TAU0 364 aa7.77□□□□□ -1.17
CAPN3-214ENST00000565274 LAPTM4AQ15012 233 aa7.76□□□□□ -1.17
CAPN3-214ENST00000565274 ZEB1P37275 1124 aaPredicted RBP7.75□□□□□ -1.17
CAPN3-214ENST00000565274 NPDC1Q9NQX5 325 aaPredicted RBP7.75□□□□□ -1.17
CAPN3-214ENST00000565274 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.75□□□□□ -1.17
CAPN3-214ENST00000565274 TRAF7Q6Q0C0 670 aa7.74□□□□□ -1.17
CAPN3-214ENST00000565274 RBM27Q9P2N5 1060 aaKnown RBP7.74□□□□□ -1.17
CAPN3-214ENST00000565274 EIF4G1Q04637 1599 aaKnown RBP7.73□□□□□ -1.17
CAPN3-214ENST00000565274 HAP1P54257 671 aaPredicted RBP7.73□□□□□ -1.17
CAPN3-214ENST00000565274 SLF2Q8IX21 1173 aa7.73□□□□□ -1.17
CAPN3-214ENST00000565274 LCE2BO14633 110 aa7.72□□□□□ -1.17
CAPN3-214ENST00000565274 TTC13Q8NBP0 860 aa7.72□□□□□ -1.17
CAPN3-214ENST00000565274 MLLT3P42568 568 aaPredicted RBP7.71□□□□□ -1.18
CAPN3-214ENST00000565274 SLC4A3P48751 1232 aa7.71□□□□□ -1.18
CAPN3-214ENST00000565274 TOP2AP11388 1531 aaKnown RBP7.71□□□□□ -1.18
CAPN3-214ENST00000565274 NECTIN2Q92692 538 aa7.7□□□□□ -1.18
CAPN3-214ENST00000565274 CHMP4AQ9BY43 222 aa7.7□□□□□ -1.18
CAPN3-214ENST00000565274 V9GY48 417 aaPredicted RBP7.7□□□□□ -1.18
CAPN3-214ENST00000565274 WIZO95785 1651 aa7.7□□□□□ -1.18
CAPN3-214ENST00000565274 NRG2O14511 850 aaPredicted RBP7.69□□□□□ -1.18
CAPN3-214ENST00000565274 GGCXP38435 758 aa7.69□□□□□ -1.18
CAPN3-214ENST00000565274 PDE4CQ08493 712 aa7.69□□□□□ -1.18
CAPN3-214ENST00000565274 EYA1Q99502 592 aa7.69□□□□□ -1.18
CAPN3-214ENST00000565274 PDZRN3Q9UPQ7 1066 aa7.69□□□□□ -1.18
CAPN3-214ENST00000565274 ZPR1O75312 459 aa7.68□□□□□ -1.18
CAPN3-214ENST00000565274 TSHZ2Q9NRE2 1034 aa7.68□□□□□ -1.18
CAPN3-214ENST00000565274 PCDHB3Q9Y5E6 796 aa7.68□□□□□ -1.18
CAPN3-214ENST00000565274 SMARCA4P51532 1647 aa7.67□□□□□ -1.18
CAPN3-214ENST00000565274 NUTM2FA1L443 756 aa7.66□□□□□ -1.18
CAPN3-214ENST00000565274 FAM161AQ3B820 660 aa7.66□□□□□ -1.18
CAPN3-214ENST00000565274 BLOC1S3Q6QNY0 202 aa7.66□□□□□ -1.18
CAPN3-214ENST00000565274 EEA1Q15075 1411 aa7.65□□□□□ -1.18
CAPN3-214ENST00000565274 ARHGEF1Q92888 912 aaKnown RBP7.65□□□□□ -1.18
CAPN3-214ENST00000565274 PEG3Q9GZU2 1588 aa7.65□□□□□ -1.18
CAPN3-214ENST00000565274 TLL1O43897 1013 aa7.64□□□□□ -1.19
CAPN3-214ENST00000565274 DNAJB2P25686 324 aa7.64□□□□□ -1.19
CAPN3-214ENST00000565274 KCNV2Q8TDN2 545 aa7.64□□□□□ -1.19
CAPN3-214ENST00000565274 PKNOX2Q96KN3 472 aa7.64□□□□□ -1.19
CAPN3-214ENST00000565274 PRR14Q9BWN1 585 aa7.64□□□□□ -1.19
CAPN3-214ENST00000565274 CCDC88BA6NC98 1476 aa7.63□□□□□ -1.19
CAPN3-214ENST00000565274 WRNQ14191 1432 aaPredicted RBP eCLIP7.63□□□□□ -1.19
CAPN3-214ENST00000565274 PTGDRQ13258 359 aa7.63□□□□□ -1.19
CAPN3-214ENST00000565274 RBM46Q8TBY0 533 aaKnown RBP7.63□□□□□ -1.19
CAPN3-214ENST00000565274 SMARCA2P51531 1590 aa7.63□□□□□ -1.19
CAPN3-214ENST00000565274 RNF223E7ERA6 249 aa7.62□□□□□ -1.19
CAPN3-214ENST00000565274 PPEF1O14829 653 aaPredicted RBP7.62□□□□□ -1.19
CAPN3-214ENST00000565274 NEFLP07196 543 aa7.62□□□□□ -1.19
CAPN3-214ENST00000565274 ZNF787Q6DD87 383 aa7.62□□□□□ -1.19
CAPN3-214ENST00000565274 TMUB1Q9BVT8 246 aa7.62□□□□□ -1.19
CAPN3-214ENST00000565274 ADGRG1Q9Y653 693 aa7.62□□□□□ -1.19
CAPN3-214ENST00000565274 RCCD1A6NED2 376 aa7.61□□□□□ -1.19
CAPN3-214ENST00000565274 UBTFP17480 764 aaKnown RBP7.61□□□□□ -1.19
CAPN3-214ENST00000565274 BRD2P25440 801 aaKnown RBP7.61□□□□□ -1.19
CAPN3-214ENST00000565274 SLC19A1P41440 591 aa7.61□□□□□ -1.19
CAPN3-214ENST00000565274 TAF7LQ5H9L4 462 aa7.61□□□□□ -1.19
CAPN3-214ENST00000565274 VSIG10Q8N0Z9 540 aa7.61□□□□□ -1.19
CAPN3-214ENST00000565274 CFHP08603 1231 aa7.6□□□□□ -1.19
CAPN3-214ENST00000565274 KMT5BQ4FZB7 885 aa7.6□□□□□ -1.19
CAPN3-214ENST00000565274 TMEM134Q9H6X4 195 aa7.6□□□□□ -1.19
CAPN3-214ENST00000565274 S1PR4O95977 384 aa7.59□□□□□ -1.19
CAPN3-214ENST00000565274 TNIKQ9UKE5 1360 aa7.59□□□□□ -1.2
CAPN3-214ENST00000565274 BICRAQ9NZM4 1560 aa7.58□□□□□ -1.2
CAPN3-214ENST00000565274 ACTN4O43707 911 aaKnown RBP7.57□□□□□ -1.2
CAPN3-214ENST00000565274 EMID1Q96A84 441 aaPredicted RBP7.57□□□□□ -1.2
CAPN3-214ENST00000565274 CDK11AQ9UQ88 783 aaPredicted RBP7.57□□□□□ -1.2
CAPN3-214ENST00000565274 SEMA3EO15041 775 aa7.56□□□□□ -1.2
CAPN3-214ENST00000565274 SLC10A3P09131 477 aa7.56□□□□□ -1.2
CAPN3-214ENST00000565274 TRIM67Q6ZTA4 783 aa7.56□□□□□ -1.2
CAPN3-214ENST00000565274 DHX37Q8IY37 1157 aaKnown RBP7.56□□□□□ -1.2
CAPN3-214ENST00000565274 UNC13AQ9UPW8 1703 aa7.55□□□□□ -1.2
CAPN3-214ENST00000565274 FCHSD2O94868 740 aa7.55□□□□□ -1.2
CAPN3-214ENST00000565274 CDK11BP21127 795 aaKnown RBP7.55□□□□□ -1.2
CAPN3-214ENST00000565274 PKDCCQ504Y2 493 aa7.55□□□□□ -1.2
CAPN3-214ENST00000565274 SPRYD7Q5W111 196 aa7.55□□□□□ -1.2
CAPN3-214ENST00000565274 LIAT1Q6ZQX7 453 aa7.55□□□□□ -1.2
CAPN3-214ENST00000565274 TNFRSF10AO00220 468 aa7.54□□□□□ -1.2
CAPN3-214ENST00000565274 ZNF697Q5TEC3 545 aa7.54□□□□□ -1.2
CAPN3-214ENST00000565274 ANKLE1Q8NAG6 615 aa7.54□□□□□ -1.2
CAPN3-214ENST00000565274 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.53□□□□□ -1.2
CAPN3-214ENST00000565274 NR1I2O75469 434 aa7.53□□□□□ -1.2
CAPN3-214ENST00000565274 ADH1BP00325 375 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms