RNA–Protein interactions for RNA: ENST00000565235.2

CDH16-203, Transcript of cadherin 16, humanhuman

TSL 3

Gene CDH16, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-203ENST00000565235 HDGFP51858 240 aaKnown RBP20.04■□□□□ 0.8
CDH16-203ENST00000565235 TXNDC2Q86VQ3 553 aa20.04■□□□□ 0.8
CDH16-203ENST00000565235 TRIM52Q96A61 297 aa20.04■□□□□ 0.8
CDH16-203ENST00000565235 TMEM131LA2VDJ0 1609 aa20.03■□□□□ 0.8
CDH16-203ENST00000565235 SPHKAPQ2M3C7 1700 aa20.03■□□□□ 0.8
CDH16-203ENST00000565235 SLC4A1APQ9BWU0 796 aaKnown RBP20.02■□□□□ 0.8
CDH16-203ENST00000565235 ZFYVE9O95405 1425 aa20.01■□□□□ 0.79
CDH16-203ENST00000565235 LTKP29376 864 aa20■□□□□ 0.79
CDH16-203ENST00000565235 ABCF1Q8NE71 845 aaKnown RBP eCLIP20■□□□□ 0.79
CDH16-203ENST00000565235 MED1Q15648 1581 aaPredicted RBP19.97■□□□□ 0.79
CDH16-203ENST00000565235 RIMS2Q9UQ26 1411 aa19.97■□□□□ 0.79
CDH16-203ENST00000565235 HRCP23327 699 aa19.97■□□□□ 0.79
CDH16-203ENST00000565235 PLEKHG1Q9ULL1 1385 aa19.95■□□□□ 0.79
CDH16-203ENST00000565235 RAB3GAP2Q9H2M9 1393 aa19.95■□□□□ 0.78
CDH16-203ENST00000565235 CHGAP10645 457 aaKnown RBP19.93■□□□□ 0.78
CDH16-203ENST00000565235 CLTCL1P53675 1640 aa19.92■□□□□ 0.78
CDH16-203ENST00000565235 PPP1R15AO75807 674 aaPredicted RBP19.92■□□□□ 0.78
CDH16-203ENST00000565235 MPHOSPH9Q99550 1183 aa19.92■□□□□ 0.78
CDH16-203ENST00000565235 BCANQ96GW7 911 aa19.91■□□□□ 0.78
CDH16-203ENST00000565235 DIP2AQ14689 1571 aa19.91■□□□□ 0.78
CDH16-203ENST00000565235 CCDC144AA2RUR9 1427 aa19.89■□□□□ 0.77
CDH16-203ENST00000565235 LRRC7Q96NW7 1537 aa19.89■□□□□ 0.77
CDH16-203ENST00000565235 MYO5BQ9ULV0 1848 aa19.86■□□□□ 0.77
CDH16-203ENST00000565235 NKTRP30414 1462 aaKnown RBP19.86■□□□□ 0.77
CDH16-203ENST00000565235 PIK3R4Q99570 1358 aa19.85■□□□□ 0.77
CDH16-203ENST00000565235 RPGRIP1LQ68CZ1 1315 aa19.85■□□□□ 0.77
CDH16-203ENST00000565235 NWD1Q149M9 1564 aa19.84■□□□□ 0.77
CDH16-203ENST00000565235 KIF1BO60333 1816 aa19.84■□□□□ 0.77
CDH16-203ENST00000565235 ZNF326Q5BKZ1 582 aaKnown RBP19.84■□□□□ 0.77
CDH16-203ENST00000565235 TBX22Q9Y458 520 aa19.84■□□□□ 0.77
CDH16-203ENST00000565235 SETBP1Q9Y6X0 1596 aa19.83■□□□□ 0.77
CDH16-203ENST00000565235 NEXMIFQ5QGS0 1516 aa19.83■□□□□ 0.77
CDH16-203ENST00000565235 KCNA6P17658 529 aa19.82■□□□□ 0.76
CDH16-203ENST00000565235 PROSER2Q86WR7 435 aaPredicted RBP19.82■□□□□ 0.76
CDH16-203ENST00000565235 SLC26A8Q96RN1 970 aa19.81■□□□□ 0.76
CDH16-203ENST00000565235 ADAMTS13Q76LX8 1427 aa19.81■□□□□ 0.76
CDH16-203ENST00000565235 VGFO15240 615 aaPredicted RBP19.8■□□□□ 0.76
CDH16-203ENST00000565235 SPATA31E1Q6ZUB1 1445 aa19.78■□□□□ 0.76
CDH16-203ENST00000565235 FOXD1Q16676 465 aa19.78■□□□□ 0.76
CDH16-203ENST00000565235 STRCP1A6NGW2 1772 aa19.78■□□□□ 0.76
CDH16-203ENST00000565235 TMEM94Q12767 1356 aa19.76■□□□□ 0.75
CDH16-203ENST00000565235 ANKRD30BQ9BXX2 1392 aa19.76■□□□□ 0.75
CDH16-203ENST00000565235 NCOA3Q9Y6Q9 1424 aa19.76■□□□□ 0.75
CDH16-203ENST00000565235 FAM135BQ49AJ0 1406 aa19.74■□□□□ 0.75
CDH16-203ENST00000565235 NRXN3Q9Y4C0 1643 aa19.73■□□□□ 0.75
CDH16-203ENST00000565235 NUTM2DQ5VT03 806 aaPredicted RBP19.73■□□□□ 0.75
CDH16-203ENST00000565235 C14orf37Q86TY3 774 aa19.73■□□□□ 0.75
CDH16-203ENST00000565235 RBM33Q96EV2 1170 aaKnown RBP19.73■□□□□ 0.75
CDH16-203ENST00000565235 ALKQ9UM73 1620 aa19.73■□□□□ 0.75
CDH16-203ENST00000565235 RGS17Q9UGC6 210 aaPredicted RBP19.71■□□□□ 0.75
CDH16-203ENST00000565235 CHD2O14647 1828 aaKnown RBP19.71■□□□□ 0.75
CDH16-203ENST00000565235 MSH6P52701 1360 aa19.7■□□□□ 0.74
CDH16-203ENST00000565235 PPLO60437 1756 aa19.7■□□□□ 0.74
CDH16-203ENST00000565235 PRAG1Q86YV5 1406 aa19.68■□□□□ 0.74
CDH16-203ENST00000565235 STAC3Q96MF2 364 aa19.67■□□□□ 0.74
CDH16-203ENST00000565235 SLAIN2Q9P270 581 aa19.67■□□□□ 0.74
CDH16-203ENST00000565235 XRN1Q8IZH2 1706 aaKnown RBP19.67■□□□□ 0.74
CDH16-203ENST00000565235 MYOM2P54296 1465 aa19.67■□□□□ 0.74
CDH16-203ENST00000565235 IFT172Q9UG01 1749 aa19.65■□□□□ 0.74
CDH16-203ENST00000565235 TRIM26Q12899 539 aaPredicted RBP19.65■□□□□ 0.74
CDH16-203ENST00000565235 MEX3CQ5U5Q3 659 aaKnown RBP19.65■□□□□ 0.74
CDH16-203ENST00000565235 POTEAQ6S8J7 498 aa19.65■□□□□ 0.74
CDH16-203ENST00000565235 RGL3Q3MIN7 710 aa19.64■□□□□ 0.73
CDH16-203ENST00000565235 AMOTL2Q9Y2J4 779 aa19.64■□□□□ 0.73
CDH16-203ENST00000565235 METP08581 1390 aa19.64■□□□□ 0.73
CDH16-203ENST00000565235 PIK3C2GO75747 1445 aa19.64■□□□□ 0.73
CDH16-203ENST00000565235 PTPRUQ92729 1446 aa19.64■□□□□ 0.73
CDH16-203ENST00000565235 PTCH1Q13635 1447 aa19.63■□□□□ 0.73
CDH16-203ENST00000565235 XIRP1Q702N8 1843 aaKnown RBP19.62■□□□□ 0.73
CDH16-203ENST00000565235 NRXN1Q9ULB1 1477 aa19.62■□□□□ 0.73
CDH16-203ENST00000565235 DCCP43146 1447 aa19.62■□□□□ 0.73
CDH16-203ENST00000565235 SETD1AO15047 1707 aaKnown RBP19.61■□□□□ 0.73
CDH16-203ENST00000565235 JCADQ9P266 1359 aa19.6■□□□□ 0.73
CDH16-203ENST00000565235 ATF3P18847 181 aa19.6■□□□□ 0.73
CDH16-203ENST00000565235 LAMC1P11047 1609 aa19.6■□□□□ 0.73
CDH16-203ENST00000565235 ADGRF5Q8IZF2 1346 aa19.59■□□□□ 0.73
CDH16-203ENST00000565235 C19orf44Q9H6X5 657 aa19.58■□□□□ 0.72
CDH16-203ENST00000565235 CADPS2Q86UW7 1296 aa19.56■□□□□ 0.72
CDH16-203ENST00000565235 TECPR2O15040 1411 aa19.56■□□□□ 0.72
CDH16-203ENST00000565235 ZNF772Q68DY9 489 aaPredicted RBP19.55■□□□□ 0.72
CDH16-203ENST00000565235 ADGRL3Q9HAR2 1447 aa19.54■□□□□ 0.72
CDH16-203ENST00000565235 LRPPRCP42704 1394 aaKnown RBP19.53■□□□□ 0.72
CDH16-203ENST00000565235 ROBO1Q9Y6N7 1651 aa19.52■□□□□ 0.72
CDH16-203ENST00000565235 C14orf93Q9H972 538 aaKnown RBP19.52■□□□□ 0.72
CDH16-203ENST00000565235 ABCC11Q96J66 1382 aa19.52■□□□□ 0.72
CDH16-203ENST00000565235 SPATA31A6Q5VVP1 1343 aa19.51■□□□□ 0.71
CDH16-203ENST00000565235 ROBO2Q9HCK4 1378 aa19.5■□□□□ 0.71
CDH16-203ENST00000565235 KNDC1Q76NI1 1749 aa19.49■□□□□ 0.71
CDH16-203ENST00000565235 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.49■□□□□ 0.71
CDH16-203ENST00000565235 ASXL1Q8IXJ9 1541 aa19.49■□□□□ 0.71
CDH16-203ENST00000565235 DHX57Q6P158 1386 aaKnown RBP19.48■□□□□ 0.71
CDH16-203ENST00000565235 NUTM2BA6NNL0 878 aaPredicted RBP19.48■□□□□ 0.71
CDH16-203ENST00000565235 NUTM2EB1AL46 878 aaPredicted RBP19.48■□□□□ 0.71
CDH16-203ENST00000565235 NUTM2AQ8IVF1 878 aaPredicted RBP19.48■□□□□ 0.71
CDH16-203ENST00000565235 DCAF11Q8TEB1 546 aa19.48■□□□□ 0.71
CDH16-203ENST00000565235 SIRT1Q96EB6 747 aa19.48■□□□□ 0.71
CDH16-203ENST00000565235 YTHDC2Q9H6S0 1430 aaKnown RBP19.48■□□□□ 0.71
CDH16-203ENST00000565235 RXRBP28702 533 aa19.45■□□□□ 0.7
CDH16-203ENST00000565235 NALCNQ8IZF0 1738 aa19.45■□□□□ 0.7
CDH16-203ENST00000565235 DLC1Q96QB1 1528 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms