RNA–Protein interactions for RNA: ENST00000565215.1

LINC01227-204, Transcript of long intergenic non-protein coding RNA 1227, humanhuman

TSL 3

Gene LINC01227, Length 295 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01227-204ENST00000565215 FAM217BQ9NTX9 383 aaPredicted RBP7.73□□□□□ -1.17
LINC01227-204ENST00000565215 DAXXQ9UER7 740 aaPredicted RBP7.72□□□□□ -1.17
LINC01227-204ENST00000565215 PLEKHG3A1L390 1219 aa7.71□□□□□ -1.18
LINC01227-204ENST00000565215 SSTR3P32745 418 aaPredicted RBP7.71□□□□□ -1.18
LINC01227-204ENST00000565215 LAPTM4BQ86VI4 370 aa7.71□□□□□ -1.18
LINC01227-204ENST00000565215 CDAN1Q8IWY9 1227 aa7.71□□□□□ -1.18
LINC01227-204ENST00000565215 TMEM132AQ24JP5 1023 aa7.7□□□□□ -1.18
LINC01227-204ENST00000565215 SWT1Q5T5J6 900 aaKnown RBP7.7□□□□□ -1.18
LINC01227-204ENST00000565215 MRPL50Q8N5N7 158 aaKnown RBP7.69□□□□□ -1.18
LINC01227-204ENST00000565215 IL27Q8NEV9 243 aa7.69□□□□□ -1.18
LINC01227-204ENST00000565215 ZFRQ96KR1 1074 aaKnown RBP7.69□□□□□ -1.18
LINC01227-204ENST00000565215 SAMD7Q7Z3H4 446 aa7.68□□□□□ -1.18
LINC01227-204ENST00000565215 DDX11L8A8MPP1 907 aa7.67□□□□□ -1.18
LINC01227-204ENST00000565215 CD46P15529 392 aa7.67□□□□□ -1.18
LINC01227-204ENST00000565215 DDRGK1Q96HY6 314 aa7.67□□□□□ -1.18
LINC01227-204ENST00000565215 BEGAINQ9BUH8 593 aa7.67□□□□□ -1.18
LINC01227-204ENST00000565215 SLC10A3P09131 477 aa7.66□□□□□ -1.18
LINC01227-204ENST00000565215 SULF1Q8IWU6 871 aa7.65□□□□□ -1.18
LINC01227-204ENST00000565215 RDH13Q8NBN7 331 aa7.64□□□□□ -1.19
LINC01227-204ENST00000565215 RNF40O75150 1001 aa7.63□□□□□ -1.19
LINC01227-204ENST00000565215 BCAMP50895 628 aa7.62□□□□□ -1.19
LINC01227-204ENST00000565215 HDGFP51858 240 aaKnown RBP7.62□□□□□ -1.19
LINC01227-204ENST00000565215 SLF2Q8IX21 1173 aa7.62□□□□□ -1.19
LINC01227-204ENST00000565215 ANKK1Q8NFD2 765 aa7.62□□□□□ -1.19
LINC01227-204ENST00000565215 LRCH3Q96II8 777 aa7.62□□□□□ -1.19
LINC01227-204ENST00000565215 STAC3Q96MF2 364 aa7.62□□□□□ -1.19
LINC01227-204ENST00000565215 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.62□□□□□ -1.19
LINC01227-204ENST00000565215 SOWAHBA6NEL2 793 aa7.61□□□□□ -1.19
LINC01227-204ENST00000565215 GOLGA8CPA6NN73 597 aa7.61□□□□□ -1.19
LINC01227-204ENST00000565215 WNT2BQ93097 391 aa7.61□□□□□ -1.19
LINC01227-204ENST00000565215 SPIRE2Q8WWL2 714 aa7.6□□□□□ -1.19
LINC01227-204ENST00000565215 TBC1D2Q9BYX2 928 aa7.6□□□□□ -1.19
LINC01227-204ENST00000565215 CFHP08603 1231 aa7.59□□□□□ -1.19
LINC01227-204ENST00000565215 GCGRP47871 477 aa7.59□□□□□ -1.19
LINC01227-204ENST00000565215 SH3D19Q5HYK7 790 aa7.59□□□□□ -1.19
LINC01227-204ENST00000565215 MYSM1Q5VVJ2 828 aa7.59□□□□□ -1.19
LINC01227-204ENST00000565215 SLC4A3P48751 1232 aa7.58□□□□□ -1.2
LINC01227-204ENST00000565215 GOPCQ9HD26 462 aa7.58□□□□□ -1.2
LINC01227-204ENST00000565215 HPS5Q9UPZ3 1129 aa7.58□□□□□ -1.2
LINC01227-204ENST00000565215 RSPH4AQ5TD94 716 aa7.57□□□□□ -1.2
LINC01227-204ENST00000565215 THSD4Q6ZMP0 1018 aa7.57□□□□□ -1.2
LINC01227-204ENST00000565215 KCTD12Q96CX2 325 aaKnown RBP7.57□□□□□ -1.2
LINC01227-204ENST00000565215 KDM4AO75164 1064 aa7.56□□□□□ -1.2
LINC01227-204ENST00000565215 NUTM1Q86Y26 1132 aa7.56□□□□□ -1.2
LINC01227-204ENST00000565215 RSPH6AQ9H0K4 717 aa7.56□□□□□ -1.2
LINC01227-204ENST00000565215 MOXD2PA6NHM9 499 aa7.55□□□□□ -1.2
LINC01227-204ENST00000565215 HOXA2O43364 376 aa7.55□□□□□ -1.2
LINC01227-204ENST00000565215 SKIV2LQ15477 1246 aaKnown RBP7.55□□□□□ -1.2
LINC01227-204ENST00000565215 HLA-CQ95604 372 aa7.55□□□□□ -1.2
LINC01227-204ENST00000565215 POLR3EQ9NVU0 708 aa7.55□□□□□ -1.2
LINC01227-204ENST00000565215 WBP1LQ9NX94 342 aa7.55□□□□□ -1.2
LINC01227-204ENST00000565215 LIMD1Q9UGP4 676 aa7.55□□□□□ -1.2
LINC01227-204ENST00000565215 TSR3Q9UJK0 312 aaKnown RBP7.55□□□□□ -1.2
LINC01227-204ENST00000565215 NDUFV2P19404 249 aa7.54□□□□□ -1.2
LINC01227-204ENST00000565215 CLK2P49760 499 aaKnown RBP7.54□□□□□ -1.2
LINC01227-204ENST00000565215 APLP1P51693 650 aa7.54□□□□□ -1.2
LINC01227-204ENST00000565215 PPP4CP60510 307 aa7.54□□□□□ -1.2
LINC01227-204ENST00000565215 FUT2Q10981 343 aa7.54□□□□□ -1.2
LINC01227-204ENST00000565215 DIXDC1Q155Q3 683 aa7.54□□□□□ -1.2
LINC01227-204ENST00000565215 PROCA1Q8NCQ7 364 aaPredicted RBP7.54□□□□□ -1.2
LINC01227-204ENST00000565215 MYT1LQ9UL68 1186 aa7.54□□□□□ -1.2
LINC01227-204ENST00000565215 USP46P62068 366 aa7.53□□□□□ -1.2
LINC01227-204ENST00000565215 GUCA2AQ02747 115 aa7.53□□□□□ -1.2
LINC01227-204ENST00000565215 KMT5BQ4FZB7 885 aa7.53□□□□□ -1.2
LINC01227-204ENST00000565215 RSBN1LQ6PCB5 846 aaPredicted RBP7.53□□□□□ -1.2
LINC01227-204ENST00000565215 NECTIN2Q92692 538 aa7.53□□□□□ -1.2
LINC01227-204ENST00000565215 SPTLC1O15269 473 aa7.52□□□□□ -1.21
LINC01227-204ENST00000565215 ACTN4O43707 911 aaKnown RBP7.52□□□□□ -1.21
LINC01227-204ENST00000565215 FBXO31Q5XUX0 539 aaPredicted RBP7.52□□□□□ -1.21
LINC01227-204ENST00000565215 RIC3Q7Z5B4 369 aa7.52□□□□□ -1.21
LINC01227-204ENST00000565215 SPNS2Q8IVW8 549 aa7.52□□□□□ -1.21
LINC01227-204ENST00000565215 PCMTD1Q96MG8 357 aaPredicted RBP7.52□□□□□ -1.21
LINC01227-204ENST00000565215 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.52□□□□□ -1.21
LINC01227-204ENST00000565215 PCDHGC3Q9UN70 934 aa7.51□□□□□ -1.21
LINC01227-204ENST00000565215 GTF3C3Q9Y5Q9 886 aa7.51□□□□□ -1.21
LINC01227-204ENST00000565215 GJA5P36382 358 aa7.5□□□□□ -1.21
LINC01227-204ENST00000565215 ATP6V1AP38606 617 aa7.5□□□□□ -1.21
LINC01227-204ENST00000565215 PUS10Q3MIT2 529 aaKnown RBP7.5□□□□□ -1.21
LINC01227-204ENST00000565215 PCDHB15Q9Y5E8 787 aa7.5□□□□□ -1.21
LINC01227-204ENST00000565215 FDX1P10109 184 aa7.49□□□□□ -1.21
LINC01227-204ENST00000565215 PTPN5P54829 565 aa7.49□□□□□ -1.21
LINC01227-204ENST00000565215 CSPP1Q1MSJ5 1256 aa7.49□□□□□ -1.21
LINC01227-204ENST00000565215 TUSC1Q2TAM9 212 aa7.49□□□□□ -1.21
LINC01227-204ENST00000565215 MORN1Q5T089 497 aa7.49□□□□□ -1.21
LINC01227-204ENST00000565215 PRR14Q9BWN1 585 aa7.49□□□□□ -1.21
LINC01227-204ENST00000565215 QPCTQ16769 361 aa7.48□□□□□ -1.21
LINC01227-204ENST00000565215 GRIPAP1Q4V328 841 aa7.47□□□□□ -1.21
LINC01227-204ENST00000565215 CABLES1Q8TDN4 633 aa7.47□□□□□ -1.21
LINC01227-204ENST00000565215 RNF166Q96A37 237 aaPredicted RBP7.47□□□□□ -1.21
LINC01227-204ENST00000565215 SLC27A5Q9Y2P5 690 aa7.47□□□□□ -1.21
LINC01227-204ENST00000565215 PCDHB3Q9Y5E6 796 aa7.47□□□□□ -1.21
LINC01227-204ENST00000565215 LILRB3O75022 631 aa7.46□□□□□ -1.22
LINC01227-204ENST00000565215 BLOC1S3Q6QNY0 202 aa7.46□□□□□ -1.22
LINC01227-204ENST00000565215 HRCP23327 699 aa7.45□□□□□ -1.22
LINC01227-204ENST00000565215 PPP2R2DQ66LE6 453 aa7.45□□□□□ -1.22
LINC01227-204ENST00000565215 NYAP1Q6ZVC0 841 aa7.45□□□□□ -1.22
LINC01227-204ENST00000565215 ATP1B4Q9UN42 357 aaPredicted RBP7.45□□□□□ -1.22
LINC01227-204ENST00000565215 RTL5Q5HYW3 569 aaPredicted RBP7.44□□□□□ -1.22
LINC01227-204ENST00000565215 PRPF38BQ5VTL8 546 aaKnown RBP7.44□□□□□ -1.22
LINC01227-204ENST00000565215 RNF19BQ6ZMZ0 732 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms