RNA–Protein interactions for RNA: ENST00000565215.1

LINC01227-204, Transcript of long intergenic non-protein coding RNA 1227, humanhuman

TSL 3

Gene LINC01227, Length 295 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01227-204ENST00000565215 AEBP2Q6ZN18 517 aaPredicted RBP17.92■□□□□ 0.46
LINC01227-204ENST00000565215 CHIC1Q5VXU3 224 aa17.61■□□□□ 0.41
LINC01227-204ENST00000565215 PHF23Q9BUL5 403 aaPredicted RBP15.53■□□□□ 0.08
LINC01227-204ENST00000565215 SENP3Q9H4L4 574 aaPredicted RBP15.11■□□□□ 0.01
LINC01227-204ENST00000565215 PLPPR3Q6T4P5 718 aa14.33□□□□□ -0.12
LINC01227-204ENST00000565215 FOXD1Q16676 465 aa14.05□□□□□ -0.16
LINC01227-204ENST00000565215 PPP6R1Q9UPN7 881 aa13.66□□□□□ -0.22
LINC01227-204ENST00000565215 ADRA2BP18089 450 aa13.63□□□□□ -0.23
LINC01227-204ENST00000565215 PIAS4Q8N2W9 510 aaPredicted RBP13.26□□□□□ -0.29
LINC01227-204ENST00000565215 MSH5O43196 834 aa12.84□□□□□ -0.35
LINC01227-204ENST00000565215 PPP4R3CPQ6ZMV5 832 aa12.67□□□□□ -0.38
LINC01227-204ENST00000565215 KCNA4P22459 653 aa12.58□□□□□ -0.4
LINC01227-204ENST00000565215 SCAF1Q9H7N4 1312 aaKnown RBP12.38□□□□□ -0.43
LINC01227-204ENST00000565215 POTEDQ86YR6 584 aa12.37□□□□□ -0.43
LINC01227-204ENST00000565215 MAPK8IP2Q13387 824 aaPredicted RBP12.33□□□□□ -0.44
LINC01227-204ENST00000565215 NCBP3Q53F19 620 aaKnown RBP12.32□□□□□ -0.44
LINC01227-204ENST00000565215 CNKSR2Q8WXI2 1034 aa12.26□□□□□ -0.45
LINC01227-204ENST00000565215 NPM3O75607 178 aaKnown RBP12.22□□□□□ -0.45
LINC01227-204ENST00000565215 DMRT2Q9Y5R5 561 aa12.1□□□□□ -0.47
LINC01227-204ENST00000565215 RNF216Q9NWF9 866 aaPredicted RBP11.99□□□□□ -0.49
LINC01227-204ENST00000565215 SLC4A1APQ9BWU0 796 aaKnown RBP11.98□□□□□ -0.49
LINC01227-204ENST00000565215 HOXD11P31277 338 aaPredicted RBP11.92□□□□□ -0.5
LINC01227-204ENST00000565215 EHMT2Q96KQ7 1210 aa11.84□□□□□ -0.51
LINC01227-204ENST00000565215 DNAJC5BQ9UF47 199 aa11.83□□□□□ -0.52
LINC01227-204ENST00000565215 CSRNP3Q8WYN3 585 aa11.64□□□□□ -0.55
LINC01227-204ENST00000565215 ZBTB22O15209 634 aa11.62□□□□□ -0.55
LINC01227-204ENST00000565215 DCAF8L1A6NGE4 600 aa11.54□□□□□ -0.56
LINC01227-204ENST00000565215 SLC4A2P04920 1241 aa11.52□□□□□ -0.57
LINC01227-204ENST00000565215 FOXD4L1Q9NU39 408 aa11.5□□□□□ -0.57
LINC01227-204ENST00000565215 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.32□□□□□ -0.6
LINC01227-204ENST00000565215 MYCNP04198 464 aaPredicted RBP11.26□□□□□ -0.61
LINC01227-204ENST00000565215 U3KPZ7 1027 aaPredicted RBP11.21□□□□□ -0.61
LINC01227-204ENST00000565215 ATXN8OSP0DMR3 200 aa11.06□□□□□ -0.64
LINC01227-204ENST00000565215 RNF39Q9H2S5 420 aa11.05□□□□□ -0.64
LINC01227-204ENST00000565215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.03□□□□□ -0.64
LINC01227-204ENST00000565215 HNRNPUL2Q1KMD3 747 aaKnown RBP11.03□□□□□ -0.64
LINC01227-204ENST00000565215 SAMD1Q6SPF0 538 aaPredicted RBP11.03□□□□□ -0.64
LINC01227-204ENST00000565215 ATF5Q9Y2D1 282 aaPredicted RBP11.01□□□□□ -0.65
LINC01227-204ENST00000565215 C1QBPQ07021 282 aaKnown RBP10.89□□□□□ -0.67
LINC01227-204ENST00000565215 APLP2Q06481 763 aa10.87□□□□□ -0.67
LINC01227-204ENST00000565215 SPINK5Q9NQ38 1064 aaPredicted RBP10.86□□□□□ -0.67
LINC01227-204ENST00000565215 CAPN15O75808 1086 aa10.76□□□□□ -0.69
LINC01227-204ENST00000565215 ZNF219Q9P2Y4 722 aaPredicted RBP10.76□□□□□ -0.69
LINC01227-204ENST00000565215 TRHP20396 242 aaPredicted RBP10.75□□□□□ -0.69
LINC01227-204ENST00000565215 CACNB1Q02641 598 aaPredicted RBP10.61□□□□□ -0.71
LINC01227-204ENST00000565215 POLA2Q14181 598 aa10.61□□□□□ -0.71
LINC01227-204ENST00000565215 ABCB7O75027 752 aa10.6□□□□□ -0.71
LINC01227-204ENST00000565215 DSG3P32926 999 aa10.57□□□□□ -0.72
LINC01227-204ENST00000565215 MKRN4PQ13434 485 aaPredicted RBP10.53□□□□□ -0.72
LINC01227-204ENST00000565215 FKBP8Q14318 412 aa10.49□□□□□ -0.73
LINC01227-204ENST00000565215 FBLN2P98095 1184 aa10.44□□□□□ -0.74
LINC01227-204ENST00000565215 ZBTB12Q9Y330 459 aaPredicted RBP10.42□□□□□ -0.74
LINC01227-204ENST00000565215 SPDYE4A6NLX3 237 aa10.32□□□□□ -0.76
LINC01227-204ENST00000565215 OSCARQ8IYS5 282 aa10.28□□□□□ -0.76
LINC01227-204ENST00000565215 PROM2Q8N271 834 aa10.21□□□□□ -0.77
LINC01227-204ENST00000565215 SPDYE2BA6NHP3 402 aa10.17□□□□□ -0.78
LINC01227-204ENST00000565215 SPDYE6P0CI01 402 aa10.17□□□□□ -0.78
LINC01227-204ENST00000565215 SPDYE2Q495Y8 402 aa10.17□□□□□ -0.78
LINC01227-204ENST00000565215 ZNF692Q9BU19 519 aaPredicted RBP10.15□□□□□ -0.78
LINC01227-204ENST00000565215 SSUH2Q9Y2M2 353 aa10.15□□□□□ -0.78
LINC01227-204ENST00000565215 PABPN1Q86U42 306 aaKnown RBP eCLIP10.04□□□□□ -0.8
LINC01227-204ENST00000565215 RBM42Q9BTD8 480 aaKnown RBP10.02□□□□□ -0.81
LINC01227-204ENST00000565215 FBXO3Q9UK99 471 aa10.02□□□□□ -0.81
LINC01227-204ENST00000565215 AKT1S1Q96B36 256 aa9.94□□□□□ -0.82
LINC01227-204ENST00000565215 VASPP50552 380 aaPredicted RBP9.93□□□□□ -0.82
LINC01227-204ENST00000565215 REM2Q8IYK8 340 aaPredicted RBP9.87□□□□□ -0.83
LINC01227-204ENST00000565215 STAG3Q9UJ98 1225 aa9.86□□□□□ -0.83
LINC01227-204ENST00000565215 RTN4Q9NQC3 1192 aaKnown RBP9.84□□□□□ -0.83
LINC01227-204ENST00000565215 IFNLR1Q8IU57 520 aaPredicted RBP9.82□□□□□ -0.84
LINC01227-204ENST00000565215 SPDYE1Q8NFV5 336 aaPredicted RBP9.82□□□□□ -0.84
LINC01227-204ENST00000565215 AMER1Q5JTC6 1135 aaPredicted RBP9.81□□□□□ -0.84
LINC01227-204ENST00000565215 PITPNM1O00562 1244 aa9.78□□□□□ -0.84
LINC01227-204ENST00000565215 CLEC11AQ9Y240 323 aa9.78□□□□□ -0.84
LINC01227-204ENST00000565215 MIER1Q8N108 512 aa9.74□□□□□ -0.85
LINC01227-204ENST00000565215 PLCD3Q8N3E9 789 aa9.74□□□□□ -0.85
LINC01227-204ENST00000565215 PRR29P0C7W0 189 aa9.7□□□□□ -0.86
LINC01227-204ENST00000565215 KLHL34Q8N239 644 aa9.68□□□□□ -0.86
LINC01227-204ENST00000565215 CREBZFQ9NS37 354 aa9.66□□□□□ -0.86
LINC01227-204ENST00000565215 POTEHQ6S545 545 aa9.64□□□□□ -0.87
LINC01227-204ENST00000565215 SPOCK2Q92563 424 aa9.64□□□□□ -0.87
LINC01227-204ENST00000565215 PLEKHG5O94827 1062 aa9.63□□□□□ -0.87
LINC01227-204ENST00000565215 MNX1P50219 401 aaPredicted RBP9.6□□□□□ -0.87
LINC01227-204ENST00000565215 ZBTB47Q9UFB7 747 aaPredicted RBP9.6□□□□□ -0.87
LINC01227-204ENST00000565215 CHADLQ6NUI6 762 aa9.57□□□□□ -0.88
LINC01227-204ENST00000565215 CHRDL2Q6WN34 429 aa9.57□□□□□ -0.88
LINC01227-204ENST00000565215 PKD2Q13563 968 aa9.56□□□□□ -0.88
LINC01227-204ENST00000565215 FXR2P51116 673 aaKnown RBP eCLIP9.55□□□□□ -0.88
LINC01227-204ENST00000565215 NUBP1P53384 320 aa9.53□□□□□ -0.88
LINC01227-204ENST00000565215 PRKAR2AP13861 404 aaKnown RBP9.51□□□□□ -0.89
LINC01227-204ENST00000565215 PIP4P2Q8N4L2 257 aa9.5□□□□□ -0.89
LINC01227-204ENST00000565215 RASEFQ8IZ41 740 aa9.46□□□□□ -0.9
LINC01227-204ENST00000565215 CIZ1Q9ULV3 898 aaPredicted RBP9.46□□□□□ -0.9
LINC01227-204ENST00000565215 FARP1Q9Y4F1 1045 aaPredicted RBP9.46□□□□□ -0.9
LINC01227-204ENST00000565215 ECM2O94769 699 aaPredicted RBP9.44□□□□□ -0.9
LINC01227-204ENST00000565215 NPM1P06748 294 aaKnown RBP eCLIP9.44□□□□□ -0.9
LINC01227-204ENST00000565215 GSE1Q14687 1217 aa9.4□□□□□ -0.9
LINC01227-204ENST00000565215 DCAF8Q5TAQ9 597 aa9.4□□□□□ -0.9
LINC01227-204ENST00000565215 FAM212AQ96EL1 285 aa9.4□□□□□ -0.9
LINC01227-204ENST00000565215 RGL2O15211 777 aa9.37□□□□□ -0.91
LINC01227-204ENST00000565215 TRIM41Q8WV44 630 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms