RNA–Protein interactions for RNA: ENST00000564988.5

TM6SF1-206, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 4

Gene TM6SF1, Length 548 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-206ENST00000564988 RGL3Q3MIN7 710 aa35.47■■■■□ 3.27
TM6SF1-206ENST00000564988 RPGRIP1LQ68CZ1 1315 aa35.47■■■■□ 3.27
TM6SF1-206ENST00000564988 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.46■■■■□ 3.27
TM6SF1-206ENST00000564988 SCAF11Q99590 1463 aaKnown RBP35.45■■■■□ 3.27
TM6SF1-206ENST00000564988 TXNDC2Q86VQ3 553 aa35.44■■■■□ 3.26
TM6SF1-206ENST00000564988 NEXMIFQ5QGS0 1516 aa35.43■■■■□ 3.26
TM6SF1-206ENST00000564988 NEUROD1Q13562 356 aa35.43■■■■□ 3.26
TM6SF1-206ENST00000564988 POLR1AO95602 1720 aaPredicted RBP35.42■■■■□ 3.26
TM6SF1-206ENST00000564988 LTKP29376 864 aa35.41■■■■□ 3.26
TM6SF1-206ENST00000564988 NCKAP5LQ9HCH0 1330 aa35.4■■■■□ 3.26
TM6SF1-206ENST00000564988 PPP1R15AO75807 674 aaPredicted RBP35.4■■■■□ 3.26
TM6SF1-206ENST00000564988 STRCQ7RTU9 1775 aa35.38■■■■□ 3.25
TM6SF1-206ENST00000564988 PPLO60437 1756 aa35.36■■■■□ 3.25
TM6SF1-206ENST00000564988 MED14O60244 1454 aa35.35■■■■□ 3.25
TM6SF1-206ENST00000564988 VGFO15240 615 aaPredicted RBP35.34■■■■□ 3.25
TM6SF1-206ENST00000564988 NUTM2DQ5VT03 806 aaPredicted RBP35.34■■■■□ 3.25
TM6SF1-206ENST00000564988 IFT172Q9UG01 1749 aa35.34■■■■□ 3.25
TM6SF1-206ENST00000564988 NPHP4O75161 1426 aaPredicted RBP35.32■■■■□ 3.25
TM6SF1-206ENST00000564988 PLEKHG1Q9ULL1 1385 aa35.32■■■■□ 3.24
TM6SF1-206ENST00000564988 DMRT2Q9Y5R5 561 aa35.3■■■■□ 3.24
TM6SF1-206ENST00000564988 STAC3Q96MF2 364 aa35.29■■■■□ 3.24
TM6SF1-206ENST00000564988 MYOM2P54296 1465 aa35.29■■■■□ 3.24
TM6SF1-206ENST00000564988 TONSLQ96HA7 1378 aa35.28■■■■□ 3.24
TM6SF1-206ENST00000564988 DCAF11Q8TEB1 546 aa35.28■■■■□ 3.24
TM6SF1-206ENST00000564988 IQGAP1P46940 1657 aa35.27■■■■□ 3.24
TM6SF1-206ENST00000564988 L3MBTL2Q969R5 705 aa35.24■■■■□ 3.23
TM6SF1-206ENST00000564988 BCANQ96GW7 911 aa35.24■■■■□ 3.23
TM6SF1-206ENST00000564988 KDM2AQ9Y2K7 1162 aa35.22■■■■□ 3.23
TM6SF1-206ENST00000564988 ADGRF5Q8IZF2 1346 aa35.22■■■■□ 3.23
TM6SF1-206ENST00000564988 SETBP1Q9Y6X0 1596 aa35.21■■■■□ 3.23
TM6SF1-206ENST00000564988 NRXN1Q9ULB1 1477 aa35.19■■■■□ 3.22
TM6SF1-206ENST00000564988 SENP3Q9H4L4 574 aaPredicted RBP35.17■■■■□ 3.22
TM6SF1-206ENST00000564988 DIP2AQ14689 1571 aa35.17■■■■□ 3.22
TM6SF1-206ENST00000564988 PIK3C2GO75747 1445 aa35.16■■■■□ 3.22
TM6SF1-206ENST00000564988 TIMELESSQ9UNS1 1208 aa35.16■■■■□ 3.22
TM6SF1-206ENST00000564988 NRXN3Q9Y4C0 1643 aa35.15■■■■□ 3.22
TM6SF1-206ENST00000564988 ADAMTS13Q76LX8 1427 aa35.15■■■■□ 3.22
TM6SF1-206ENST00000564988 SLC26A8Q96RN1 970 aa35.13■■■■□ 3.21
TM6SF1-206ENST00000564988 TBX22Q9Y458 520 aa35.11■■■■□ 3.21
TM6SF1-206ENST00000564988 ALKQ9UM73 1620 aa35.08■■■■□ 3.21
TM6SF1-206ENST00000564988 PRAG1Q86YV5 1406 aa35.07■■■■□ 3.21
TM6SF1-206ENST00000564988 LAMC1P11047 1609 aa35.06■■■■□ 3.2
TM6SF1-206ENST00000564988 C14orf93Q9H972 538 aaKnown RBP35.03■■■■□ 3.2
TM6SF1-206ENST00000564988 PIK3R4Q99570 1358 aa35.02■■■■□ 3.2
TM6SF1-206ENST00000564988 SETD1AO15047 1707 aaKnown RBP35.01■■■■□ 3.2
TM6SF1-206ENST00000564988 CFAP70Q5T0N1 1121 aa35■■■■□ 3.19
TM6SF1-206ENST00000564988 METP08581 1390 aa34.98■■■■□ 3.19
TM6SF1-206ENST00000564988 KIAA1210Q9ULL0 1709 aa34.96■■■■□ 3.19
TM6SF1-206ENST00000564988 ZNF335Q9H4Z2 1342 aaPredicted RBP34.93■■■■□ 3.18
TM6SF1-206ENST00000564988 KCNA6P17658 529 aa34.92■■■■□ 3.18
TM6SF1-206ENST00000564988 NBPF8Q3BBV2 869 aa34.92■■■■□ 3.18
TM6SF1-206ENST00000564988 NWD1Q149M9 1564 aa34.91■■■■□ 3.18
TM6SF1-206ENST00000564988 ASXL1Q8IXJ9 1541 aa34.91■■■■□ 3.18
TM6SF1-206ENST00000564988 CHD2O14647 1828 aaKnown RBP34.9■■■■□ 3.18
TM6SF1-206ENST00000564988 PTPRUQ92729 1446 aa34.89■■■■□ 3.18
TM6SF1-206ENST00000564988 TRPM1Q7Z4N2 1603 aa34.89■■■■□ 3.18
TM6SF1-206ENST00000564988 TMEM132EQ6IEE7 984 aa34.88■■■■□ 3.17
TM6SF1-206ENST00000564988 ADGRB1O14514 1584 aa34.87■■■■□ 3.17
TM6SF1-206ENST00000564988 AMOTL2Q9Y2J4 779 aa34.86■■■■□ 3.17
TM6SF1-206ENST00000564988 NKTRP30414 1462 aaKnown RBP34.85■■■■□ 3.17
TM6SF1-206ENST00000564988 XRN1Q8IZH2 1706 aaKnown RBP34.85■■■■□ 3.17
TM6SF1-206ENST00000564988 LRPPRCP42704 1394 aaKnown RBP34.85■■■■□ 3.17
TM6SF1-206ENST00000564988 RALGAPBQ86X10 1494 aa34.84■■■■□ 3.17
TM6SF1-206ENST00000564988 YTHDC2Q9H6S0 1430 aaKnown RBP34.84■■■■□ 3.17
TM6SF1-206ENST00000564988 CPS1P31327 1500 aa34.84■■■■□ 3.17
TM6SF1-206ENST00000564988 STRCP1A6NGW2 1772 aa34.82■■■■□ 3.17
TM6SF1-206ENST00000564988 ROCK2O75116 1388 aaKnown RBP34.82■■■■□ 3.16
TM6SF1-206ENST00000564988 NBPF1Q3BBV0 1214 aa34.81■■■■□ 3.16
TM6SF1-206ENST00000564988 LTBP4Q8N2S1 1624 aa34.81■■■■□ 3.16
TM6SF1-206ENST00000564988 ABCC11Q96J66 1382 aa34.79■■■■□ 3.16
TM6SF1-206ENST00000564988 STK26Q9P289 416 aa34.79■■■■□ 3.16
TM6SF1-206ENST00000564988 TECPR2O15040 1411 aa34.78■■■■□ 3.16
TM6SF1-206ENST00000564988 KNDC1Q76NI1 1749 aa34.78■■■■□ 3.16
TM6SF1-206ENST00000564988 PTCH1Q13635 1447 aa34.77■■■■□ 3.16
TM6SF1-206ENST00000564988 GPRASP1Q5JY77 1395 aa34.76■■■■□ 3.16
TM6SF1-206ENST00000564988 PROSER2Q86WR7 435 aaPredicted RBP34.73■■■■□ 3.15
TM6SF1-206ENST00000564988 DLC1Q96QB1 1528 aa34.72■■■■□ 3.15
TM6SF1-206ENST00000564988 LRRC7Q96NW7 1537 aa34.71■■■■□ 3.15
TM6SF1-206ENST00000564988 ROBO2Q9HCK4 1378 aa34.71■■■■□ 3.15
TM6SF1-206ENST00000564988 CARD11Q9BXL7 1154 aa34.7■■■■□ 3.15
TM6SF1-206ENST00000564988 TRAK1Q9UPV9 953 aa34.7■■■■□ 3.15
TM6SF1-206ENST00000564988 SIRT1Q96EB6 747 aa34.69■■■■□ 3.14
TM6SF1-206ENST00000564988 FAM135BQ49AJ0 1406 aa34.68■■■■□ 3.14
TM6SF1-206ENST00000564988 TMEM94Q12767 1356 aa34.66■■■■□ 3.14
TM6SF1-206ENST00000564988 ZEB1P37275 1124 aaPredicted RBP34.65■■■■□ 3.14
TM6SF1-206ENST00000564988 NCOA3Q9Y6Q9 1424 aa34.64■■■■□ 3.14
TM6SF1-206ENST00000564988 ARHGEF28Q8N1W1 1705 aaKnown RBP34.62■■■■□ 3.13
TM6SF1-206ENST00000564988 PRAM1Q96QH2 718 aa34.61■■■■□ 3.13
TM6SF1-206ENST00000564988 POGKQ9P215 609 aa34.61■■■■□ 3.13
TM6SF1-206ENST00000564988 EIF3AQ14152 1382 aaKnown RBP34.61■■■■□ 3.13
TM6SF1-206ENST00000564988 WAPLQ7Z5K2 1190 aa34.59■■■■□ 3.13
TM6SF1-206ENST00000564988 RBM33Q96EV2 1170 aaKnown RBP34.59■■■■□ 3.13
TM6SF1-206ENST00000564988 PLEKHH1Q9ULM0 1364 aa34.58■■■■□ 3.13
TM6SF1-206ENST00000564988 IQSEC2Q5JU85 1478 aa34.58■■■■□ 3.13
TM6SF1-206ENST00000564988 C14orf37Q86TY3 774 aa34.57■■■■□ 3.12
TM6SF1-206ENST00000564988 CERKQ8TCT0 537 aa34.57■■■■□ 3.12
TM6SF1-206ENST00000564988 XIRP1Q702N8 1843 aaKnown RBP34.56■■■■□ 3.12
TM6SF1-206ENST00000564988 ADGRL3Q9HAR2 1447 aa34.55■■■■□ 3.12
TM6SF1-206ENST00000564988 CENPJQ9HC77 1338 aaPredicted RBP34.53■■■■□ 3.12
TM6SF1-206ENST00000564988 MSH6P52701 1360 aa34.52■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms