RNA–Protein interactions for RNA: ENST00000564940.2

CHTF18-215, Transcript of chromosome transmission fidelity factor 18, humanhuman

TSL 2

Gene CHTF18, Length 197 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTF18-215ENST00000564940 KCNA6P17658 529 aa25.17■■□□□ 1.62
CHTF18-215ENST00000564940 NUP155O75694 1391 aa25.17■■□□□ 1.62
CHTF18-215ENST00000564940 MED1Q15648 1581 aaPredicted RBP25.16■■□□□ 1.62
CHTF18-215ENST00000564940 RIMS2Q9UQ26 1411 aa25.16■■□□□ 1.62
CHTF18-215ENST00000564940 NWD1Q149M9 1564 aa25.15■■□□□ 1.62
CHTF18-215ENST00000564940 TMEM94Q12767 1356 aa25.15■■□□□ 1.62
CHTF18-215ENST00000564940 SOCS7O14512 581 aa25.14■■□□□ 1.62
CHTF18-215ENST00000564940 PLEKHG1Q9ULL1 1385 aa25.14■■□□□ 1.61
CHTF18-215ENST00000564940 SENP3Q9H4L4 574 aaPredicted RBP25.13■■□□□ 1.61
CHTF18-215ENST00000564940 RRBP1Q9P2E9 1410 aaKnown RBP25.12■■□□□ 1.61
CHTF18-215ENST00000564940 RBM33Q96EV2 1170 aaKnown RBP25.11■■□□□ 1.61
CHTF18-215ENST00000564940 NKTRP30414 1462 aaKnown RBP25.1■■□□□ 1.61
CHTF18-215ENST00000564940 BCANQ96GW7 911 aa25.1■■□□□ 1.61
CHTF18-215ENST00000564940 CHD2O14647 1828 aaKnown RBP25.08■■□□□ 1.61
CHTF18-215ENST00000564940 CHGAP10645 457 aaKnown RBP25.08■■□□□ 1.61
CHTF18-215ENST00000564940 PROSER2Q86WR7 435 aaPredicted RBP25.08■■□□□ 1.61
CHTF18-215ENST00000564940 PPP1R15AO75807 674 aaPredicted RBP25.07■■□□□ 1.6
CHTF18-215ENST00000564940 HDGFP51858 240 aaKnown RBP25.07■■□□□ 1.6
CHTF18-215ENST00000564940 NUTM2DQ5VT03 806 aaPredicted RBP25.05■■□□□ 1.6
CHTF18-215ENST00000564940 FAM135BQ49AJ0 1406 aa25.04■■□□□ 1.6
CHTF18-215ENST00000564940 ADAMTS13Q76LX8 1427 aa25.04■■□□□ 1.6
CHTF18-215ENST00000564940 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.04■■□□□ 1.6
CHTF18-215ENST00000564940 SPHKAPQ2M3C7 1700 aa25.03■■□□□ 1.6
CHTF18-215ENST00000564940 TBX22Q9Y458 520 aa25.03■■□□□ 1.6
CHTF18-215ENST00000564940 NAIPQ13075 1403 aa25.02■■□□□ 1.6
CHTF18-215ENST00000564940 ROBO1Q9Y6N7 1651 aa25■■□□□ 1.59
CHTF18-215ENST00000564940 DIP2AQ14689 1571 aa24.98■■□□□ 1.59
CHTF18-215ENST00000564940 MSH6P52701 1360 aa24.97■■□□□ 1.59
CHTF18-215ENST00000564940 NRXN3Q9Y4C0 1643 aa24.94■■□□□ 1.58
CHTF18-215ENST00000564940 PIK3R4Q99570 1358 aa24.93■■□□□ 1.58
CHTF18-215ENST00000564940 CLTCL1P53675 1640 aa24.93■■□□□ 1.58
CHTF18-215ENST00000564940 TRPM2O94759 1503 aa24.91■■□□□ 1.58
CHTF18-215ENST00000564940 PHF23Q9BUL5 403 aaPredicted RBP24.91■■□□□ 1.58
CHTF18-215ENST00000564940 SLAIN2Q9P270 581 aa24.91■■□□□ 1.58
CHTF18-215ENST00000564940 HFM1A2PYH4 1435 aa24.91■■□□□ 1.58
CHTF18-215ENST00000564940 PTPRUQ92729 1446 aa24.91■■□□□ 1.58
CHTF18-215ENST00000564940 NCOA3Q9Y6Q9 1424 aa24.91■■□□□ 1.58
CHTF18-215ENST00000564940 SETBP1Q9Y6X0 1596 aa24.89■■□□□ 1.58
CHTF18-215ENST00000564940 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.86■■□□□ 1.57
CHTF18-215ENST00000564940 ZNF326Q5BKZ1 582 aaKnown RBP24.86■■□□□ 1.57
CHTF18-215ENST00000564940 AMOTL2Q9Y2J4 779 aa24.86■■□□□ 1.57
CHTF18-215ENST00000564940 NEXMIFQ5QGS0 1516 aa24.86■■□□□ 1.57
CHTF18-215ENST00000564940 XRN1Q8IZH2 1706 aaKnown RBP24.84■■□□□ 1.57
CHTF18-215ENST00000564940 RGS17Q9UGC6 210 aaPredicted RBP24.84■■□□□ 1.57
CHTF18-215ENST00000564940 KIF1BO60333 1816 aa24.83■■□□□ 1.57
CHTF18-215ENST00000564940 PHLPP1O60346 1717 aa24.83■■□□□ 1.57
CHTF18-215ENST00000564940 C14orf37Q86TY3 774 aa24.82■■□□□ 1.56
CHTF18-215ENST00000564940 C19orf44Q9H6X5 657 aa24.82■■□□□ 1.56
CHTF18-215ENST00000564940 METP08581 1390 aa24.81■■□□□ 1.56
CHTF18-215ENST00000564940 TRIM52Q96A61 297 aa24.81■■□□□ 1.56
CHTF18-215ENST00000564940 COL16A1Q07092 1604 aaPredicted RBP24.79■■□□□ 1.56
CHTF18-215ENST00000564940 CADPS2Q86UW7 1296 aa24.78■■□□□ 1.56
CHTF18-215ENST00000564940 SLC4A1APQ9BWU0 796 aaKnown RBP24.77■■□□□ 1.56
CHTF18-215ENST00000564940 ATF3P18847 181 aa24.76■■□□□ 1.55
CHTF18-215ENST00000564940 DCCP43146 1447 aa24.73■■□□□ 1.55
CHTF18-215ENST00000564940 JCADQ9P266 1359 aa24.73■■□□□ 1.55
CHTF18-215ENST00000564940 AHDC1Q5TGY3 1603 aaPredicted RBP24.72■■□□□ 1.55
CHTF18-215ENST00000564940 SETD1AO15047 1707 aaKnown RBP24.72■■□□□ 1.55
CHTF18-215ENST00000564940 FOXD1Q16676 465 aa24.7■■□□□ 1.54
CHTF18-215ENST00000564940 BRINP3Q76B58 766 aa24.69■■□□□ 1.54
CHTF18-215ENST00000564940 PPLO60437 1756 aa24.68■■□□□ 1.54
CHTF18-215ENST00000564940 MST1RQ04912 1400 aa24.68■■□□□ 1.54
CHTF18-215ENST00000564940 NALCNQ8IZF0 1738 aa24.67■■□□□ 1.54
CHTF18-215ENST00000564940 VGFO15240 615 aaPredicted RBP24.67■■□□□ 1.54
CHTF18-215ENST00000564940 POTEAQ6S8J7 498 aa24.67■■□□□ 1.54
CHTF18-215ENST00000564940 RPGRIP1LQ68CZ1 1315 aa24.66■■□□□ 1.54
CHTF18-215ENST00000564940 ADGRL3Q9HAR2 1447 aa24.66■■□□□ 1.54
CHTF18-215ENST00000564940 ASXL1Q8IXJ9 1541 aa24.65■■□□□ 1.54
CHTF18-215ENST00000564940 LRP6O75581 1613 aa24.64■■□□□ 1.53
CHTF18-215ENST00000564940 SHPRHQ149N8 1683 aa24.63■■□□□ 1.53
CHTF18-215ENST00000564940 PTCH1Q13635 1447 aa24.61■■□□□ 1.53
CHTF18-215ENST00000564940 MPHOSPH9Q99550 1183 aa24.61■■□□□ 1.53
CHTF18-215ENST00000564940 ROBO2Q9HCK4 1378 aa24.61■■□□□ 1.53
CHTF18-215ENST00000564940 NHSL1Q5SYE7 1610 aa24.61■■□□□ 1.53
CHTF18-215ENST00000564940 PRAG1Q86YV5 1406 aa24.61■■□□□ 1.53
CHTF18-215ENST00000564940 SPATA31A6Q5VVP1 1343 aa24.61■■□□□ 1.53
CHTF18-215ENST00000564940 CCDC144AA2RUR9 1427 aa24.59■■□□□ 1.53
CHTF18-215ENST00000564940 SPATA31E1Q6ZUB1 1445 aa24.59■■□□□ 1.53
CHTF18-215ENST00000564940 IFT172Q9UG01 1749 aa24.55■■□□□ 1.52
CHTF18-215ENST00000564940 SETD5Q9C0A6 1442 aa24.55■■□□□ 1.52
CHTF18-215ENST00000564940 ADGRF5Q8IZF2 1346 aa24.55■■□□□ 1.52
CHTF18-215ENST00000564940 C1orf167Q5SNV9 1468 aa24.53■■□□□ 1.52
CHTF18-215ENST00000564940 DDX17Q92841 729 aaKnown RBP24.53■■□□□ 1.52
CHTF18-215ENST00000564940 RGL3Q3MIN7 710 aa24.52■■□□□ 1.52
CHTF18-215ENST00000564940 MEX3CQ5U5Q3 659 aaKnown RBP24.49■■□□□ 1.51
CHTF18-215ENST00000564940 LAMC1P11047 1609 aa24.49■■□□□ 1.51
CHTF18-215ENST00000564940 ANKRD30BQ9BXX2 1392 aa24.48■■□□□ 1.51
CHTF18-215ENST00000564940 LRRC59Q96AG4 307 aaKnown RBP24.47■■□□□ 1.51
CHTF18-215ENST00000564940 NUTM2BA6NNL0 878 aaPredicted RBP24.46■■□□□ 1.51
CHTF18-215ENST00000564940 NUTM2EB1AL46 878 aaPredicted RBP24.46■■□□□ 1.51
CHTF18-215ENST00000564940 NUTM2AQ8IVF1 878 aaPredicted RBP24.46■■□□□ 1.51
CHTF18-215ENST00000564940 ORAI2Q96SN7 254 aa24.46■■□□□ 1.51
CHTF18-215ENST00000564940 PIK3C2GO75747 1445 aa24.45■■□□□ 1.51
CHTF18-215ENST00000564940 TECPR2O15040 1411 aa24.44■■□□□ 1.5
CHTF18-215ENST00000564940 PNPLA6Q8IY17 1366 aa24.44■■□□□ 1.5
CHTF18-215ENST00000564940 ACIN1Q9UKV3 1341 aaKnown RBP24.43■■□□□ 1.5
CHTF18-215ENST00000564940 CDC42BPGQ6DT37 1551 aa24.43■■□□□ 1.5
CHTF18-215ENST00000564940 ZNF772Q68DY9 489 aaPredicted RBP24.43■■□□□ 1.5
CHTF18-215ENST00000564940 RAB3GAP2Q9H2M9 1393 aa24.42■■□□□ 1.5
CHTF18-215ENST00000564940 LRPPRCP42704 1394 aaKnown RBP24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms