RNA–Protein interactions for RNA: ENST00000564843.1

LINC01413-201, Transcript of long intergenic non-protein coding RNA 1413, humanhuman

TSL 3 BASIC

Gene LINC01413, Length 772 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01413-201ENST00000564843 ZFYVE9O95405 1425 aa25.8■■□□□ 1.72
LINC01413-201ENST00000564843 SLC52A1Q9NWF4 448 aa25.79■■□□□ 1.72
LINC01413-201ENST00000564843 NWD1Q149M9 1564 aa25.78■■□□□ 1.72
LINC01413-201ENST00000564843 CHD2O14647 1828 aaKnown RBP25.77■■□□□ 1.72
LINC01413-201ENST00000564843 ITGAEP38570 1179 aa25.75■■□□□ 1.71
LINC01413-201ENST00000564843 RIMS2Q9UQ26 1411 aa25.73■■□□□ 1.71
LINC01413-201ENST00000564843 TMEM94Q12767 1356 aa25.73■■□□□ 1.71
LINC01413-201ENST00000564843 RBM33Q96EV2 1170 aaKnown RBP25.73■■□□□ 1.71
LINC01413-201ENST00000564843 KCNA6P17658 529 aa25.72■■□□□ 1.71
LINC01413-201ENST00000564843 NKTRP30414 1462 aaKnown RBP25.69■■□□□ 1.7
LINC01413-201ENST00000564843 PLEKHG1Q9ULL1 1385 aa25.69■■□□□ 1.7
LINC01413-201ENST00000564843 SPHKAPQ2M3C7 1700 aa25.68■■□□□ 1.7
LINC01413-201ENST00000564843 ROBO1Q9Y6N7 1651 aa25.68■■□□□ 1.7
LINC01413-201ENST00000564843 NUP155O75694 1391 aa25.67■■□□□ 1.7
LINC01413-201ENST00000564843 PROSER2Q86WR7 435 aaPredicted RBP25.66■■□□□ 1.7
LINC01413-201ENST00000564843 CHGAP10645 457 aaKnown RBP25.65■■□□□ 1.7
LINC01413-201ENST00000564843 BCANQ96GW7 911 aa25.65■■□□□ 1.7
LINC01413-201ENST00000564843 NUTM2DQ5VT03 806 aaPredicted RBP25.64■■□□□ 1.7
LINC01413-201ENST00000564843 FAM135BQ49AJ0 1406 aa25.62■■□□□ 1.69
LINC01413-201ENST00000564843 ADAMTS13Q76LX8 1427 aa25.62■■□□□ 1.69
LINC01413-201ENST00000564843 PPP1R15AO75807 674 aaPredicted RBP25.61■■□□□ 1.69
LINC01413-201ENST00000564843 RRBP1Q9P2E9 1410 aaKnown RBP25.6■■□□□ 1.69
LINC01413-201ENST00000564843 DIP2AQ14689 1571 aa25.57■■□□□ 1.68
LINC01413-201ENST00000564843 NRXN3Q9Y4C0 1643 aa25.57■■□□□ 1.68
LINC01413-201ENST00000564843 CLTCL1P53675 1640 aa25.55■■□□□ 1.68
LINC01413-201ENST00000564843 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.54■■□□□ 1.68
LINC01413-201ENST00000564843 TBX22Q9Y458 520 aa25.54■■□□□ 1.68
LINC01413-201ENST00000564843 HDGFP51858 240 aaKnown RBP25.53■■□□□ 1.68
LINC01413-201ENST00000564843 PHF23Q9BUL5 403 aaPredicted RBP25.53■■□□□ 1.68
LINC01413-201ENST00000564843 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.53■■□□□ 1.68
LINC01413-201ENST00000564843 MSH6P52701 1360 aa25.53■■□□□ 1.68
LINC01413-201ENST00000564843 NAIPQ13075 1403 aa25.53■■□□□ 1.68
LINC01413-201ENST00000564843 PHLPP1O60346 1717 aa25.52■■□□□ 1.68
LINC01413-201ENST00000564843 PTPRUQ92729 1446 aa25.51■■□□□ 1.67
LINC01413-201ENST00000564843 TRPM2O94759 1503 aa25.49■■□□□ 1.67
LINC01413-201ENST00000564843 KIF1BO60333 1816 aa25.49■■□□□ 1.67
LINC01413-201ENST00000564843 RGS17Q9UGC6 210 aaPredicted RBP25.48■■□□□ 1.67
LINC01413-201ENST00000564843 XRN1Q8IZH2 1706 aaKnown RBP25.48■■□□□ 1.67
LINC01413-201ENST00000564843 SETBP1Q9Y6X0 1596 aa25.48■■□□□ 1.67
LINC01413-201ENST00000564843 PIK3R4Q99570 1358 aa25.45■■□□□ 1.67
LINC01413-201ENST00000564843 SLAIN2Q9P270 581 aa25.45■■□□□ 1.66
LINC01413-201ENST00000564843 NEXMIFQ5QGS0 1516 aa25.45■■□□□ 1.66
LINC01413-201ENST00000564843 COL16A1Q07092 1604 aaPredicted RBP25.45■■□□□ 1.66
LINC01413-201ENST00000564843 NCOA3Q9Y6Q9 1424 aa25.43■■□□□ 1.66
LINC01413-201ENST00000564843 AMOTL2Q9Y2J4 779 aa25.4■■□□□ 1.66
LINC01413-201ENST00000564843 ZNF326Q5BKZ1 582 aaKnown RBP25.39■■□□□ 1.66
LINC01413-201ENST00000564843 HFM1A2PYH4 1435 aa25.38■■□□□ 1.65
LINC01413-201ENST00000564843 SETD1AO15047 1707 aaKnown RBP25.37■■□□□ 1.65
LINC01413-201ENST00000564843 METP08581 1390 aa25.37■■□□□ 1.65
LINC01413-201ENST00000564843 C14orf37Q86TY3 774 aa25.37■■□□□ 1.65
LINC01413-201ENST00000564843 AHDC1Q5TGY3 1603 aaPredicted RBP25.35■■□□□ 1.65
LINC01413-201ENST00000564843 C19orf44Q9H6X5 657 aa25.34■■□□□ 1.65
LINC01413-201ENST00000564843 NALCNQ8IZF0 1738 aa25.34■■□□□ 1.65
LINC01413-201ENST00000564843 PPLO60437 1756 aa25.32■■□□□ 1.64
LINC01413-201ENST00000564843 POTEAQ6S8J7 498 aa25.31■■□□□ 1.64
LINC01413-201ENST00000564843 TRIM52Q96A61 297 aa25.31■■□□□ 1.64
LINC01413-201ENST00000564843 JCADQ9P266 1359 aa25.31■■□□□ 1.64
LINC01413-201ENST00000564843 CADPS2Q86UW7 1296 aa25.3■■□□□ 1.64
LINC01413-201ENST00000564843 SHPRHQ149N8 1683 aa25.29■■□□□ 1.64
LINC01413-201ENST00000564843 ATF3P18847 181 aa25.29■■□□□ 1.64
LINC01413-201ENST00000564843 LRP6O75581 1613 aa25.29■■□□□ 1.64
LINC01413-201ENST00000564843 DCCP43146 1447 aa25.27■■□□□ 1.64
LINC01413-201ENST00000564843 NHSL1Q5SYE7 1610 aa25.26■■□□□ 1.63
LINC01413-201ENST00000564843 BRINP3Q76B58 766 aa25.26■■□□□ 1.63
LINC01413-201ENST00000564843 MST1RQ04912 1400 aa25.25■■□□□ 1.63
LINC01413-201ENST00000564843 ASXL1Q8IXJ9 1541 aa25.25■■□□□ 1.63
LINC01413-201ENST00000564843 SLC4A1APQ9BWU0 796 aaKnown RBP25.24■■□□□ 1.63
LINC01413-201ENST00000564843 FOXD1Q16676 465 aa25.23■■□□□ 1.63
LINC01413-201ENST00000564843 ADGRL3Q9HAR2 1447 aa25.22■■□□□ 1.63
LINC01413-201ENST00000564843 IFT172Q9UG01 1749 aa25.19■■□□□ 1.62
LINC01413-201ENST00000564843 ROBO2Q9HCK4 1378 aa25.17■■□□□ 1.62
LINC01413-201ENST00000564843 PTCH1Q13635 1447 aa25.16■■□□□ 1.62
LINC01413-201ENST00000564843 SPATA31A6Q5VVP1 1343 aa25.14■■□□□ 1.62
LINC01413-201ENST00000564843 VGFO15240 615 aaPredicted RBP25.14■■□□□ 1.62
LINC01413-201ENST00000564843 DDX17Q92841 729 aaKnown RBP25.14■■□□□ 1.62
LINC01413-201ENST00000564843 PRAG1Q86YV5 1406 aa25.12■■□□□ 1.61
LINC01413-201ENST00000564843 SETD5Q9C0A6 1442 aa25.12■■□□□ 1.61
LINC01413-201ENST00000564843 RPGRIP1LQ68CZ1 1315 aa25.12■■□□□ 1.61
LINC01413-201ENST00000564843 LAMC1P11047 1609 aa25.1■■□□□ 1.61
LINC01413-201ENST00000564843 SPATA31E1Q6ZUB1 1445 aa25.1■■□□□ 1.61
LINC01413-201ENST00000564843 C1orf167Q5SNV9 1468 aa25.09■■□□□ 1.61
LINC01413-201ENST00000564843 ADGRF5Q8IZF2 1346 aa25.08■■□□□ 1.6
LINC01413-201ENST00000564843 CCDC144AA2RUR9 1427 aa25.07■■□□□ 1.6
LINC01413-201ENST00000564843 MEX3CQ5U5Q3 659 aaKnown RBP25.07■■□□□ 1.6
LINC01413-201ENST00000564843 MPHOSPH9Q99550 1183 aa25.07■■□□□ 1.6
LINC01413-201ENST00000564843 NUTM2BA6NNL0 878 aaPredicted RBP25.06■■□□□ 1.6
LINC01413-201ENST00000564843 NUTM2EB1AL46 878 aaPredicted RBP25.06■■□□□ 1.6
LINC01413-201ENST00000564843 NUTM2AQ8IVF1 878 aaPredicted RBP25.06■■□□□ 1.6
LINC01413-201ENST00000564843 RGL3Q3MIN7 710 aa25.04■■□□□ 1.6
LINC01413-201ENST00000564843 PNPLA6Q8IY17 1366 aa25.03■■□□□ 1.6
LINC01413-201ENST00000564843 KNDC1Q76NI1 1749 aa25.03■■□□□ 1.6
LINC01413-201ENST00000564843 ORAI2Q96SN7 254 aa25.01■■□□□ 1.59
LINC01413-201ENST00000564843 CDC42BPGQ6DT37 1551 aa25■■□□□ 1.59
LINC01413-201ENST00000564843 LRRC59Q96AG4 307 aaKnown RBP24.99■■□□□ 1.59
LINC01413-201ENST00000564843 PIK3C2GO75747 1445 aa24.97■■□□□ 1.59
LINC01413-201ENST00000564843 ZNF772Q68DY9 489 aaPredicted RBP24.97■■□□□ 1.59
LINC01413-201ENST00000564843 AFF2P51816 1311 aa24.96■■□□□ 1.59
LINC01413-201ENST00000564843 TECPR2O15040 1411 aa24.95■■□□□ 1.59
LINC01413-201ENST00000564843 ANKRD30BQ9BXX2 1392 aa24.95■■□□□ 1.59
LINC01413-201ENST00000564843 PLEKHH1Q9ULM0 1364 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms