RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 TXNDC2Q86VQ3 553 aa18.17■□□□□ 0.5
KARS-204ENST00000564578 NUTM2DQ5VT03 806 aaPredicted RBP18.16■□□□□ 0.5
KARS-204ENST00000564578 NEUROD1Q13562 356 aa18.15■□□□□ 0.5
KARS-204ENST00000564578 CCER1Q8TC90 406 aaPredicted RBP18.15■□□□□ 0.5
KARS-204ENST00000564578 NEXMIFQ5QGS0 1516 aa18.15■□□□□ 0.5
KARS-204ENST00000564578 SCAF11Q99590 1463 aaKnown RBP18.14■□□□□ 0.5
KARS-204ENST00000564578 EID1Q9Y6B2 187 aa18.14■□□□□ 0.49
KARS-204ENST00000564578 RPGRIP1LQ68CZ1 1315 aa18.14■□□□□ 0.49
KARS-204ENST00000564578 CLSPNQ9HAW4 1339 aa18.14■□□□□ 0.49
KARS-204ENST00000564578 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.12■□□□□ 0.49
KARS-204ENST00000564578 MED14O60244 1454 aa18.12■□□□□ 0.49
KARS-204ENST00000564578 HDGFP51858 240 aaKnown RBP18.11■□□□□ 0.49
KARS-204ENST00000564578 POLR1AO95602 1720 aaPredicted RBP18.09■□□□□ 0.49
KARS-204ENST00000564578 VGFO15240 615 aaPredicted RBP18.09■□□□□ 0.49
KARS-204ENST00000564578 PPP1R15AO75807 674 aaPredicted RBP18.09■□□□□ 0.49
KARS-204ENST00000564578 DCAF11Q8TEB1 546 aa18.09■□□□□ 0.49
KARS-204ENST00000564578 ADGRF5Q8IZF2 1346 aa18.09■□□□□ 0.49
KARS-204ENST00000564578 NPHP4O75161 1426 aaPredicted RBP18.09■□□□□ 0.49
KARS-204ENST00000564578 PPLO60437 1756 aa18.08■□□□□ 0.49
KARS-204ENST00000564578 L3MBTL2Q969R5 705 aa18.08■□□□□ 0.49
KARS-204ENST00000564578 SENP3Q9H4L4 574 aaPredicted RBP18.08■□□□□ 0.49
KARS-204ENST00000564578 PLEKHG1Q9ULL1 1385 aa18.08■□□□□ 0.49
KARS-204ENST00000564578 IFT172Q9UG01 1749 aa18.07■□□□□ 0.48
KARS-204ENST00000564578 KDM2AQ9Y2K7 1162 aa18.06■□□□□ 0.48
KARS-204ENST00000564578 DMRT2Q9Y5R5 561 aa18.06■□□□□ 0.48
KARS-204ENST00000564578 SLC26A8Q96RN1 970 aa18.05■□□□□ 0.48
KARS-204ENST00000564578 ADAMTS13Q76LX8 1427 aa18.04■□□□□ 0.48
KARS-204ENST00000564578 IQGAP1P46940 1657 aa18.04■□□□□ 0.48
KARS-204ENST00000564578 MYOM2P54296 1465 aa18.03■□□□□ 0.48
KARS-204ENST00000564578 NRXN1Q9ULB1 1477 aa18.03■□□□□ 0.48
KARS-204ENST00000564578 NRXN3Q9Y4C0 1643 aa18.02■□□□□ 0.48
KARS-204ENST00000564578 STAC3Q96MF2 364 aa18.02■□□□□ 0.48
KARS-204ENST00000564578 PIK3C2GO75747 1445 aa18.02■□□□□ 0.47
KARS-204ENST00000564578 SETBP1Q9Y6X0 1596 aa18.02■□□□□ 0.47
KARS-204ENST00000564578 BCANQ96GW7 911 aa18.01■□□□□ 0.47
KARS-204ENST00000564578 TONSLQ96HA7 1378 aa18.01■□□□□ 0.47
KARS-204ENST00000564578 TBX22Q9Y458 520 aa18■□□□□ 0.47
KARS-204ENST00000564578 TIMELESSQ9UNS1 1208 aa17.97■□□□□ 0.47
KARS-204ENST00000564578 ALKQ9UM73 1620 aa17.97■□□□□ 0.47
KARS-204ENST00000564578 METP08581 1390 aa17.96■□□□□ 0.47
KARS-204ENST00000564578 CFAP70Q5T0N1 1121 aa17.96■□□□□ 0.47
KARS-204ENST00000564578 C14orf93Q9H972 538 aaKnown RBP17.96■□□□□ 0.47
KARS-204ENST00000564578 PRAG1Q86YV5 1406 aa17.96■□□□□ 0.47
KARS-204ENST00000564578 ZNF335Q9H4Z2 1342 aaPredicted RBP17.95■□□□□ 0.46
KARS-204ENST00000564578 NBPF8Q3BBV2 869 aa17.94■□□□□ 0.46
KARS-204ENST00000564578 SETD1AO15047 1707 aaKnown RBP17.94■□□□□ 0.46
KARS-204ENST00000564578 DIP2AQ14689 1571 aa17.94■□□□□ 0.46
KARS-204ENST00000564578 PTPRUQ92729 1446 aa17.93■□□□□ 0.46
KARS-204ENST00000564578 TMEM132EQ6IEE7 984 aa17.92■□□□□ 0.46
KARS-204ENST00000564578 PIK3R4Q99570 1358 aa17.92■□□□□ 0.46
KARS-204ENST00000564578 ASXL1Q8IXJ9 1541 aa17.91■□□□□ 0.46
KARS-204ENST00000564578 KCNA6P17658 529 aa17.9■□□□□ 0.46
KARS-204ENST00000564578 NBPF1Q3BBV0 1214 aa17.9■□□□□ 0.46
KARS-204ENST00000564578 STRCP1A6NGW2 1772 aa17.89■□□□□ 0.45
KARS-204ENST00000564578 AMOTL2Q9Y2J4 779 aa17.88■□□□□ 0.45
KARS-204ENST00000564578 ADGRB1O14514 1584 aa17.88■□□□□ 0.45
KARS-204ENST00000564578 CHD2O14647 1828 aaKnown RBP17.88■□□□□ 0.45
KARS-204ENST00000564578 LTBP4Q8N2S1 1624 aa17.87■□□□□ 0.45
KARS-204ENST00000564578 LAMC1P11047 1609 aa17.87■□□□□ 0.45
KARS-204ENST00000564578 NWD1Q149M9 1564 aa17.85■□□□□ 0.45
KARS-204ENST00000564578 KIAA1210Q9ULL0 1709 aa17.84■□□□□ 0.45
KARS-204ENST00000564578 TRPM1Q7Z4N2 1603 aa17.84■□□□□ 0.45
KARS-204ENST00000564578 YTHDC2Q9H6S0 1430 aaKnown RBP17.84■□□□□ 0.45
KARS-204ENST00000564578 STK26Q9P289 416 aa17.84■□□□□ 0.45
KARS-204ENST00000564578 LRPPRCP42704 1394 aaKnown RBP17.84■□□□□ 0.45
KARS-204ENST00000564578 XRN1Q8IZH2 1706 aaKnown RBP17.83■□□□□ 0.45
KARS-204ENST00000564578 ABCC11Q96J66 1382 aa17.83■□□□□ 0.44
KARS-204ENST00000564578 ROBO2Q9HCK4 1378 aa17.82■□□□□ 0.44
KARS-204ENST00000564578 RBM33Q96EV2 1170 aaKnown RBP17.82■□□□□ 0.44
KARS-204ENST00000564578 TECPR2O15040 1411 aa17.81■□□□□ 0.44
KARS-204ENST00000564578 NKTRP30414 1462 aaKnown RBP17.81■□□□□ 0.44
KARS-204ENST00000564578 RALGAPBQ86X10 1494 aa17.81■□□□□ 0.44
KARS-204ENST00000564578 ROCK2O75116 1388 aaKnown RBP17.8■□□□□ 0.44
KARS-204ENST00000564578 GPRASP1Q5JY77 1395 aa17.8■□□□□ 0.44
KARS-204ENST00000564578 CPS1P31327 1500 aa17.8■□□□□ 0.44
KARS-204ENST00000564578 LRRC7Q96NW7 1537 aa17.8■□□□□ 0.44
KARS-204ENST00000564578 TRAK1Q9UPV9 953 aa17.8■□□□□ 0.44
KARS-204ENST00000564578 PROSER2Q86WR7 435 aaPredicted RBP17.79■□□□□ 0.44
KARS-204ENST00000564578 PTCH1Q13635 1447 aa17.78■□□□□ 0.44
KARS-204ENST00000564578 TMEM94Q12767 1356 aa17.78■□□□□ 0.44
KARS-204ENST00000564578 WAPLQ7Z5K2 1190 aa17.78■□□□□ 0.44
KARS-204ENST00000564578 SIRT1Q96EB6 747 aa17.77■□□□□ 0.44
KARS-204ENST00000564578 PLEKHH1Q9ULM0 1364 aa17.76■□□□□ 0.43
KARS-204ENST00000564578 CARD11Q9BXL7 1154 aa17.76■□□□□ 0.43
KARS-204ENST00000564578 KNDC1Q76NI1 1749 aa17.75■□□□□ 0.43
KARS-204ENST00000564578 FAM135BQ49AJ0 1406 aa17.75■□□□□ 0.43
KARS-204ENST00000564578 PRAM1Q96QH2 718 aa17.74■□□□□ 0.43
KARS-204ENST00000564578 DLC1Q96QB1 1528 aa17.74■□□□□ 0.43
KARS-204ENST00000564578 XIRP1Q702N8 1843 aaKnown RBP17.74■□□□□ 0.43
KARS-204ENST00000564578 CERKQ8TCT0 537 aa17.74■□□□□ 0.43
KARS-204ENST00000564578 NCOA3Q9Y6Q9 1424 aa17.73■□□□□ 0.43
KARS-204ENST00000564578 ARHGEF28Q8N1W1 1705 aaKnown RBP17.71■□□□□ 0.43
KARS-204ENST00000564578 SAFB2Q14151 953 aaKnown RBP eCLIP17.7■□□□□ 0.42
KARS-204ENST00000564578 POGKQ9P215 609 aa17.69■□□□□ 0.42
KARS-204ENST00000564578 C19orf44Q9H6X5 657 aa17.68■□□□□ 0.42
KARS-204ENST00000564578 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.68■□□□□ 0.42
KARS-204ENST00000564578 ADGRL3Q9HAR2 1447 aa17.68■□□□□ 0.42
KARS-204ENST00000564578 C14orf37Q86TY3 774 aa17.67■□□□□ 0.42
KARS-204ENST00000564578 IQSEC2Q5JU85 1478 aa17.67■□□□□ 0.42
KARS-204ENST00000564578 CENPJQ9HC77 1338 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms