RNA–Protein interactions for RNA: ENST00000564421.1

CPNE7-207, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-207ENST00000564421 TXNDC2Q86VQ3 553 aa25.23■■□□□ 1.63
CPNE7-207ENST00000564421 CCDC144AA2RUR9 1427 aa25.2■■□□□ 1.63
CPNE7-207ENST00000564421 RIMS2Q9UQ26 1411 aa25.2■■□□□ 1.63
CPNE7-207ENST00000564421 HDGFP51858 240 aaKnown RBP25.2■■□□□ 1.62
CPNE7-207ENST00000564421 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.16■■□□□ 1.62
CPNE7-207ENST00000564421 PPLO60437 1756 aa25.14■■□□□ 1.62
CPNE7-207ENST00000564421 NEXMIFQ5QGS0 1516 aa25.14■■□□□ 1.62
CPNE7-207ENST00000564421 ANKRD30BQ9BXX2 1392 aa25.14■■□□□ 1.61
CPNE7-207ENST00000564421 DHX57Q6P158 1386 aaKnown RBP25.13■■□□□ 1.61
CPNE7-207ENST00000564421 ZNF326Q5BKZ1 582 aaKnown RBP25.12■■□□□ 1.61
CPNE7-207ENST00000564421 PLEKHG1Q9ULL1 1385 aa25.12■■□□□ 1.61
CPNE7-207ENST00000564421 LTBP4Q8N2S1 1624 aa25.12■■□□□ 1.61
CPNE7-207ENST00000564421 IFT172Q9UG01 1749 aa25.1■■□□□ 1.61
CPNE7-207ENST00000564421 PPP1R15AO75807 674 aaPredicted RBP25.1■■□□□ 1.61
CPNE7-207ENST00000564421 SPATA31E1Q6ZUB1 1445 aa25.1■■□□□ 1.61
CPNE7-207ENST00000564421 RPGRIP1LQ68CZ1 1315 aa25.09■■□□□ 1.61
CPNE7-207ENST00000564421 CCER1Q8TC90 406 aaPredicted RBP25.08■■□□□ 1.61
CPNE7-207ENST00000564421 STRCP1A6NGW2 1772 aa25.06■■□□□ 1.6
CPNE7-207ENST00000564421 ZNF335Q9H4Z2 1342 aaPredicted RBP25.06■■□□□ 1.6
CPNE7-207ENST00000564421 DIP2AQ14689 1571 aa25.05■■□□□ 1.6
CPNE7-207ENST00000564421 SETBP1Q9Y6X0 1596 aa25.04■■□□□ 1.6
CPNE7-207ENST00000564421 NRXN3Q9Y4C0 1643 aa25.04■■□□□ 1.6
CPNE7-207ENST00000564421 NUTM2DQ5VT03 806 aaPredicted RBP25.03■■□□□ 1.6
CPNE7-207ENST00000564421 CHD2O14647 1828 aaKnown RBP25.02■■□□□ 1.6
CPNE7-207ENST00000564421 CPS1P31327 1500 aa25.02■■□□□ 1.6
CPNE7-207ENST00000564421 BCANQ96GW7 911 aa25.01■■□□□ 1.59
CPNE7-207ENST00000564421 VGFO15240 615 aaPredicted RBP25■■□□□ 1.59
CPNE7-207ENST00000564421 ADAMTS13Q76LX8 1427 aa25■■□□□ 1.59
CPNE7-207ENST00000564421 SLC26A8Q96RN1 970 aa24.99■■□□□ 1.59
CPNE7-207ENST00000564421 RGL3Q3MIN7 710 aa24.98■■□□□ 1.59
CPNE7-207ENST00000564421 CERKQ8TCT0 537 aa24.98■■□□□ 1.59
CPNE7-207ENST00000564421 TBX22Q9Y458 520 aa24.98■■□□□ 1.59
CPNE7-207ENST00000564421 NWD1Q149M9 1564 aa24.97■■□□□ 1.59
CPNE7-207ENST00000564421 IQSEC2Q5JU85 1478 aa24.97■■□□□ 1.59
CPNE7-207ENST00000564421 SETD1AO15047 1707 aaKnown RBP24.96■■□□□ 1.59
CPNE7-207ENST00000564421 PIK3R4Q99570 1358 aa24.94■■□□□ 1.58
CPNE7-207ENST00000564421 CLSPNQ9HAW4 1339 aa24.92■■□□□ 1.58
CPNE7-207ENST00000564421 KCNA6P17658 529 aa24.92■■□□□ 1.58
CPNE7-207ENST00000564421 SENP3Q9H4L4 574 aaPredicted RBP24.92■■□□□ 1.58
CPNE7-207ENST00000564421 MYOM2P54296 1465 aa24.91■■□□□ 1.58
CPNE7-207ENST00000564421 XIRP1Q702N8 1843 aaKnown RBP24.91■■□□□ 1.58
CPNE7-207ENST00000564421 ALKQ9UM73 1620 aa24.9■■□□□ 1.58
CPNE7-207ENST00000564421 NKTRP30414 1462 aaKnown RBP24.89■■□□□ 1.58
CPNE7-207ENST00000564421 LRRC7Q96NW7 1537 aa24.88■■□□□ 1.57
CPNE7-207ENST00000564421 NRXN1Q9ULB1 1477 aa24.88■■□□□ 1.57
CPNE7-207ENST00000564421 ADGRF5Q8IZF2 1346 aa24.87■■□□□ 1.57
CPNE7-207ENST00000564421 PIK3C2GO75747 1445 aa24.86■■□□□ 1.57
CPNE7-207ENST00000564421 XRN1Q8IZH2 1706 aaKnown RBP24.86■■□□□ 1.57
CPNE7-207ENST00000564421 STAC3Q96MF2 364 aa24.85■■□□□ 1.57
CPNE7-207ENST00000564421 LAMC1P11047 1609 aa24.85■■□□□ 1.57
CPNE7-207ENST00000564421 SIN3AQ96ST3 1273 aa24.84■■□□□ 1.57
CPNE7-207ENST00000564421 METP08581 1390 aa24.82■■□□□ 1.56
CPNE7-207ENST00000564421 NEUROD1Q13562 356 aa24.82■■□□□ 1.56
CPNE7-207ENST00000564421 PTPRUQ92729 1446 aa24.82■■□□□ 1.56
CPNE7-207ENST00000564421 DCAF11Q8TEB1 546 aa24.79■■□□□ 1.56
CPNE7-207ENST00000564421 FBXO41Q8TF61 875 aa24.79■■□□□ 1.56
CPNE7-207ENST00000564421 AMOTL2Q9Y2J4 779 aa24.78■■□□□ 1.56
CPNE7-207ENST00000564421 PROSER2Q86WR7 435 aaPredicted RBP24.77■■□□□ 1.56
CPNE7-207ENST00000564421 TMEM94Q12767 1356 aa24.76■■□□□ 1.55
CPNE7-207ENST00000564421 KNDC1Q76NI1 1749 aa24.75■■□□□ 1.55
CPNE7-207ENST00000564421 C14orf93Q9H972 538 aaKnown RBP24.75■■□□□ 1.55
CPNE7-207ENST00000564421 PRAG1Q86YV5 1406 aa24.75■■□□□ 1.55
CPNE7-207ENST00000564421 NCOA3Q9Y6Q9 1424 aa24.75■■□□□ 1.55
CPNE7-207ENST00000564421 KDM2AQ9Y2K7 1162 aa24.74■■□□□ 1.55
CPNE7-207ENST00000564421 ASXL1Q8IXJ9 1541 aa24.74■■□□□ 1.55
CPNE7-207ENST00000564421 KIAA1210Q9ULL0 1709 aa24.73■■□□□ 1.55
CPNE7-207ENST00000564421 PTCH1Q13635 1447 aa24.71■■□□□ 1.55
CPNE7-207ENST00000564421 CFAP70Q5T0N1 1121 aa24.68■■□□□ 1.54
CPNE7-207ENST00000564421 L3MBTL2Q969R5 705 aa24.68■■□□□ 1.54
CPNE7-207ENST00000564421 TECPR2O15040 1411 aa24.68■■□□□ 1.54
CPNE7-207ENST00000564421 LRPPRCP42704 1394 aaKnown RBP24.67■■□□□ 1.54
CPNE7-207ENST00000564421 TOM1O60784 492 aa24.67■■□□□ 1.54
CPNE7-207ENST00000564421 ADGRB1O14514 1584 aa24.67■■□□□ 1.54
CPNE7-207ENST00000564421 TONSLQ96HA7 1378 aa24.67■■□□□ 1.54
CPNE7-207ENST00000564421 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.66■■□□□ 1.54
CPNE7-207ENST00000564421 UBAP1LF5GYI3 381 aa24.66■■□□□ 1.54
CPNE7-207ENST00000564421 RBM33Q96EV2 1170 aaKnown RBP24.66■■□□□ 1.54
CPNE7-207ENST00000564421 YTHDC2Q9H6S0 1430 aaKnown RBP24.66■■□□□ 1.54
CPNE7-207ENST00000564421 TMEM132EQ6IEE7 984 aa24.65■■□□□ 1.54
CPNE7-207ENST00000564421 MSH6P52701 1360 aa24.65■■□□□ 1.54
CPNE7-207ENST00000564421 ABCC11Q96J66 1382 aa24.65■■□□□ 1.54
CPNE7-207ENST00000564421 NALCNQ8IZF0 1738 aa24.64■■□□□ 1.54
CPNE7-207ENST00000564421 ROBO2Q9HCK4 1378 aa24.63■■□□□ 1.53
CPNE7-207ENST00000564421 TIMELESSQ9UNS1 1208 aa24.62■■□□□ 1.53
CPNE7-207ENST00000564421 ZEB1P37275 1124 aaPredicted RBP24.61■■□□□ 1.53
CPNE7-207ENST00000564421 DLC1Q96QB1 1528 aa24.6■■□□□ 1.53
CPNE7-207ENST00000564421 C14orf37Q86TY3 774 aa24.59■■□□□ 1.53
CPNE7-207ENST00000564421 SIRT1Q96EB6 747 aa24.59■■□□□ 1.53
CPNE7-207ENST00000564421 C19orf44Q9H6X5 657 aa24.59■■□□□ 1.53
CPNE7-207ENST00000564421 TRPM1Q7Z4N2 1603 aa24.59■■□□□ 1.53
CPNE7-207ENST00000564421 DCCP43146 1447 aa24.59■■□□□ 1.53
CPNE7-207ENST00000564421 ADGRL3Q9HAR2 1447 aa24.59■■□□□ 1.53
CPNE7-207ENST00000564421 STK26Q9P289 416 aa24.58■■□□□ 1.53
CPNE7-207ENST00000564421 FAM135BQ49AJ0 1406 aa24.58■■□□□ 1.53
CPNE7-207ENST00000564421 ARHGEF28Q8N1W1 1705 aaKnown RBP24.55■■□□□ 1.52
CPNE7-207ENST00000564421 CADPS2Q86UW7 1296 aa24.54■■□□□ 1.52
CPNE7-207ENST00000564421 ATF3P18847 181 aa24.52■■□□□ 1.52
CPNE7-207ENST00000564421 ROBO1Q9Y6N7 1651 aa24.5■■□□□ 1.51
CPNE7-207ENST00000564421 PIP4K2BP78356 416 aa24.5■■□□□ 1.51
CPNE7-207ENST00000564421 WAPLQ7Z5K2 1190 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms